RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 VEGFAP15692 232 aaPredicted RBP16.04■□□□□ 0.16
GFAP-227ENST00000638400 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
GFAP-227ENST00000638400 FLIIQ13045 1269 aa16.04■□□□□ 0.16
GFAP-227ENST00000638400 G2E3Q7L622 706 aa16.04■□□□□ 0.16
GFAP-227ENST00000638400 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
GFAP-227ENST00000638400 SLC51AQ86UW1 340 aa16.04■□□□□ 0.16
GFAP-227ENST00000638400 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
GFAP-227ENST00000638400 HSPA6P17066 643 aa16.02■□□□□ 0.16
GFAP-227ENST00000638400 FKBP5Q13451 457 aaPredicted RBP16.02■□□□□ 0.16
GFAP-227ENST00000638400 SP8Q8IXZ3 490 aa16.02■□□□□ 0.16
GFAP-227ENST00000638400 JDP2Q8WYK2 163 aa16.02■□□□□ 0.16
GFAP-227ENST00000638400 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
GFAP-227ENST00000638400 DDNO94850 711 aaPredicted RBP16.01■□□□□ 0.15
GFAP-227ENST00000638400 FSTL1Q12841 308 aa16.01■□□□□ 0.15
GFAP-227ENST00000638400 DPP8Q6V1X1 898 aaPredicted RBP16.01■□□□□ 0.15
GFAP-227ENST00000638400 LARGE2Q8N3Y3 721 aa16.01■□□□□ 0.15
GFAP-227ENST00000638400 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
GFAP-227ENST00000638400 CDHR2Q9BYE9 1310 aa16■□□□□ 0.15
GFAP-227ENST00000638400 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
GFAP-227ENST00000638400 FZD9O00144 591 aa16■□□□□ 0.15
GFAP-227ENST00000638400 PDE8AO60658 829 aa16■□□□□ 0.15
GFAP-227ENST00000638400 L3MBTL3Q96JM7 780 aaPredicted RBP16■□□□□ 0.15
GFAP-227ENST00000638400 RTFDC1Q9BY42 306 aaPredicted RBP16■□□□□ 0.15
GFAP-227ENST00000638400 VPS33BQ9H267 617 aa16■□□□□ 0.15
GFAP-227ENST00000638400 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
GFAP-227ENST00000638400 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 IQCA1LA6NCM1 817 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 POTECB2RU33 542 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 E9PSI1 815 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 PPIP5K2O43314 1243 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 CWF19L2Q2TBE0 894 aaKnown RBP15.99■□□□□ 0.15
GFAP-227ENST00000638400 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 MPNDQ8N594 471 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 DNAAF4Q8WXU2 420 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
GFAP-227ENST00000638400 LAMB2P55268 1798 aa15.99■□□□□ 0.15
GFAP-227ENST00000638400 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
GFAP-227ENST00000638400 DICER1Q9UPY3 1922 aaKnown RBP15.98■□□□□ 0.15
GFAP-227ENST00000638400 EIF6P56537 245 aaKnown RBP15.98■□□□□ 0.15
GFAP-227ENST00000638400 NIM1KQ8IY84 436 aa15.98■□□□□ 0.15
GFAP-227ENST00000638400 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
GFAP-227ENST00000638400 COL4A5P29400 1685 aa15.98■□□□□ 0.15
GFAP-227ENST00000638400 CTSWP56202 376 aa15.97■□□□□ 0.15
GFAP-227ENST00000638400 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
GFAP-227ENST00000638400 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
GFAP-227ENST00000638400 AOC3Q16853 763 aa15.97■□□□□ 0.15
GFAP-227ENST00000638400 GPC2Q8N158 579 aa15.97■□□□□ 0.15
GFAP-227ENST00000638400 LINS1Q8NG48 757 aa15.97■□□□□ 0.15
GFAP-227ENST00000638400 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
GFAP-227ENST00000638400 APLP1P51693 650 aa15.96■□□□□ 0.15
GFAP-227ENST00000638400 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
GFAP-227ENST00000638400 GCKRQ14397 625 aa15.96■□□□□ 0.15
GFAP-227ENST00000638400 UBE3BQ7Z3V4 1068 aa15.96■□□□□ 0.15
GFAP-227ENST00000638400 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
GFAP-227ENST00000638400 CCDC88AQ3V6T2 1871 aa15.96■□□□□ 0.15
GFAP-227ENST00000638400 H7C1W4 665 aa15.95■□□□□ 0.14
GFAP-227ENST00000638400 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
GFAP-227ENST00000638400 LRRC37AA6NMS7 1700 aa15.94■□□□□ 0.14
GFAP-227ENST00000638400 SLFN5Q08AF3 891 aa15.94■□□□□ 0.14
GFAP-227ENST00000638400 CCDC85AQ96PX6 553 aaPredicted RBP15.94■□□□□ 0.14
GFAP-227ENST00000638400 TAF1DQ9H5J8 278 aaPredicted RBP15.94■□□□□ 0.14
GFAP-227ENST00000638400 HACL1Q9UJ83 578 aa15.94■□□□□ 0.14
GFAP-227ENST00000638400 ZNRF3Q9ULT6 936 aa15.94■□□□□ 0.14
GFAP-227ENST00000638400 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
GFAP-227ENST00000638400 GJA3Q9Y6H8 435 aa15.94■□□□□ 0.14
GFAP-227ENST00000638400 DUOX1Q9NRD9 1551 aa15.94■□□□□ 0.14
GFAP-227ENST00000638400 COL4A1P02462 1669 aa15.93■□□□□ 0.14
GFAP-227ENST00000638400 RTL9Q8NET4 1388 aa15.93■□□□□ 0.14
GFAP-227ENST00000638400 F6X3S4 739 aa15.93■□□□□ 0.14
GFAP-227ENST00000638400 GPSM2P81274 684 aa15.93■□□□□ 0.14
GFAP-227ENST00000638400 ANKRD18AQ8IVF6 992 aa15.93■□□□□ 0.14
GFAP-227ENST00000638400 TTLL11Q8NHH1 800 aa15.93■□□□□ 0.14
GFAP-227ENST00000638400 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
GFAP-227ENST00000638400 BEND3Q5T5X7 828 aa15.92■□□□□ 0.14
GFAP-227ENST00000638400 PLA2G12BQ9BX93 195 aa15.92■□□□□ 0.14
GFAP-227ENST00000638400 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 LMOD1P29536 600 aaPredicted RBP15.91■□□□□ 0.14
GFAP-227ENST00000638400 EPHX2P34913 555 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 CASP7P55210 303 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 WASHC4Q2M389 1173 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 LDHDQ86WU2 507 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 TBC1D16Q8TBP0 767 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 CDCA7LQ96GN5 454 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 EYA3Q99504 573 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 GREM2Q9H772 168 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 PODXL2Q9NZ53 605 aa15.91■□□□□ 0.14
GFAP-227ENST00000638400 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
GFAP-227ENST00000638400 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
GFAP-227ENST00000638400 PNMA8AQ86V59 439 aaPredicted RBP15.9■□□□□ 0.14
GFAP-227ENST00000638400 ANKIB1Q9P2G1 1089 aa15.9■□□□□ 0.14
GFAP-227ENST00000638400 POLLQ9UGP5 575 aa15.9■□□□□ 0.14
GFAP-227ENST00000638400 ALDH1L1O75891 902 aa15.89■□□□□ 0.13
GFAP-227ENST00000638400 UFL1O94874 794 aa15.89■□□□□ 0.13
GFAP-227ENST00000638400 SCNN1DP51172 638 aa15.89■□□□□ 0.13
GFAP-227ENST00000638400 CXCL9Q07325 125 aa15.89■□□□□ 0.13
GFAP-227ENST00000638400 TNIP1Q15025 636 aa15.89■□□□□ 0.13
GFAP-227ENST00000638400 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
GFAP-227ENST00000638400 CIAPIN1Q6FI81 312 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms