RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 PIK3C2AO00443 1686 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 TNS3Q68CZ2 1445 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 ZIC2O95409 532 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-206ENST00000638175 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-206ENST00000638175 SLFNL1Q499Z3 407 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 SLC16A10Q8TF71 515 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 STK17AQ9UEE5 414 aa8.65□□□□□ -1.02
SCARB2-206ENST00000638175 SBNO1A3KN83 1393 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 NWD2Q9ULI1 1742 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
SCARB2-206ENST00000638175 USP17L5A8MUK1 530 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 LZTS3O60299 673 aaPredicted RBP8.64□□□□□ -1.03
SCARB2-206ENST00000638175 SKIP12755 728 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 GMPRP36959 345 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 ZEB1P37275 1124 aaPredicted RBP8.64□□□□□ -1.03
SCARB2-206ENST00000638175 TMF1P82094 1093 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 NR5A1Q13285 461 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 SCARF1Q14162 830 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 RNF135Q8IUD6 432 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
SCARB2-206ENST00000638175 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.63□□□□□ -1.03
SCARB2-206ENST00000638175 ARHGEF10O15013 1369 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 DISP3Q9P2K9 1392 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 PLCH1Q4KWH8 1693 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 SPATA31A6Q5VVP1 1343 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 H3BM21 787 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 FOXO3O43524 673 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 RFX1P22670 979 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 USP17L2Q6R6M4 530 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 NPAS3Q8IXF0 933 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 PLPP7Q8NBV4 271 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 LRRC59Q96AG4 307 aaKnown RBP8.63□□□□□ -1.03
SCARB2-206ENST00000638175 CD163L1Q9NR16 1453 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 USP6P35125 1406 aa8.63□□□□□ -1.03
SCARB2-206ENST00000638175 CPSF1Q10570 1443 aaKnown RBP8.63□□□□□ -1.03
SCARB2-206ENST00000638175 PNPLA6Q8IY17 1366 aa8.62□□□□□ -1.03
SCARB2-206ENST00000638175 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
SCARB2-206ENST00000638175 GIGYF1O75420 1035 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-206ENST00000638175 PSME1Q06323 249 aa8.62□□□□□ -1.03
SCARB2-206ENST00000638175 NGDNQ8NEJ9 315 aaKnown RBP8.62□□□□□ -1.03
SCARB2-206ENST00000638175 LTN1O94822 1766 aa8.62□□□□□ -1.03
SCARB2-206ENST00000638175 ACEP12821 1306 aa8.61□□□□□ -1.03
SCARB2-206ENST00000638175 ATG7O95352 703 aa8.61□□□□□ -1.03
SCARB2-206ENST00000638175 HSPA5P11021 654 aaKnown RBP8.61□□□□□ -1.03
SCARB2-206ENST00000638175 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
SCARB2-206ENST00000638175 PMFBP1Q8TBY8 1022 aa8.61□□□□□ -1.03
SCARB2-206ENST00000638175 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-206ENST00000638175 COL14A1Q05707 1796 aaKnown RBP8.61□□□□□ -1.03
SCARB2-206ENST00000638175 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
SCARB2-206ENST00000638175 SPATA31A3Q5VYP0 1347 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
SCARB2-206ENST00000638175 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 KRT28Q7Z3Y7 464 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 RETREG2Q8NC44 543 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 DDX17Q92841 729 aaKnown RBP8.6□□□□□ -1.03
SCARB2-206ENST00000638175 IRF7Q92985 503 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 LRP6O75581 1613 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 EDC4Q6P2E9 1401 aaKnown RBP8.6□□□□□ -1.03
SCARB2-206ENST00000638175 SSH2Q76I76 1423 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 A0A1W2PP64 1363 aa8.6□□□□□ -1.03
SCARB2-206ENST00000638175 KTN1Q86UP2 1357 aaKnown RBP8.6□□□□□ -1.03
SCARB2-206ENST00000638175 SLIT3O75094 1523 aa8.59□□□□□ -1.03
SCARB2-206ENST00000638175 NCOA4Q13772 614 aa8.59□□□□□ -1.03
SCARB2-206ENST00000638175 KCTD15Q96SI1 283 aaPredicted RBP8.59□□□□□ -1.03
SCARB2-206ENST00000638175 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
SCARB2-206ENST00000638175 CABP1Q9NZU7 370 aa8.59□□□□□ -1.03
SCARB2-206ENST00000638175 NRAPQ86VF7 1730 aa8.59□□□□□ -1.03
SCARB2-206ENST00000638175 RGPD5Q99666 1765 aa8.58□□□□□ -1.04
SCARB2-206ENST00000638175 FSHRP23945 695 aa8.58□□□□□ -1.04
SCARB2-206ENST00000638175 XPCQ01831 940 aaPredicted RBP8.58□□□□□ -1.04
SCARB2-206ENST00000638175 ELOAQ14241 798 aaKnown RBP8.58□□□□□ -1.04
SCARB2-206ENST00000638175 VASH1Q7L8A9 365 aaPredicted RBP8.58□□□□□ -1.04
SCARB2-206ENST00000638175 HDGFL2Q7Z4V5 671 aaPredicted RBP8.58□□□□□ -1.04
SCARB2-206ENST00000638175 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
SCARB2-206ENST00000638175 VRTNQ9H8Y1 702 aa8.58□□□□□ -1.04
SCARB2-206ENST00000638175 USTQ9Y2C2 406 aa8.58□□□□□ -1.04
SCARB2-206ENST00000638175 MAP2P11137 1827 aaKnown RBP8.58□□□□□ -1.04
SCARB2-206ENST00000638175 ABCC6O95255 1503 aa8.58□□□□□ -1.04
SCARB2-206ENST00000638175 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 FAM208AQ9UK61 1670 aaKnown RBP8.57□□□□□ -1.04
SCARB2-206ENST00000638175 FAM196BA6NMK8 535 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 EML3Q32P44 896 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 TSGA10IPQ3SY00 556 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 INTS6LQ5JSJ4 861 aaKnown RBP8.57□□□□□ -1.04
SCARB2-206ENST00000638175 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 TMC1Q8TDI8 760 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 DOLKQ9UPQ8 538 aa8.57□□□□□ -1.04
SCARB2-206ENST00000638175 LMO7Q8WWI1 1683 aa8.56□□□□□ -1.04
SCARB2-206ENST00000638175 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
SCARB2-206ENST00000638175 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms