RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 PXDNLA1KZ92 1463 aa11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 CCDC171Q6TFL3 1326 aa11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 MARF1Q9Y4F3 1742 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 IDH1O75874 414 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 SNAP23O00161 211 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 ITGA6P23229 1130 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 ANAPC15P60006 121 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 HAND2P61296 217 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 ADORA1P30542 326 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 IQSEC3Q9UPP2 1182 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 ANKRD18BA2A2Z9 1011 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 KDM4AO75164 1064 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 FOXO4P98177 505 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 L1TD1Q5T7N2 865 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 PI16Q6UXB8 463 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 GREM2Q9H772 168 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 PAG1Q9NWQ8 432 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 LIMCH1Q9UPQ0 1083 aa11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 NIP7Q9Y221 180 aaKnown RBP eCLIP11.58□□□□□ -0.56
CACNA1A-248ENST00000637774 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 CHST3Q7LGC8 479 aa11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 STRCP1A6NGW2 1772 aa11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 FIBPO43427 364 aa11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 PSMA5P28066 241 aa11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 TOMM22Q9NS69 142 aa11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 ERBB4Q15303 1308 aa11.57□□□□□ -0.56
CACNA1A-248ENST00000637774 RFX5P48382 616 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 GIGYF2Q6Y7W6 1299 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 LOC102724428A0A0B4J2F2 783 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 UTYO14607 1347 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 TAF5LO75529 589 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 SIK1P57059 783 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 ATP2B3Q16720 1220 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 DDX11Q96FC9 970 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 ATP5JP18859 108 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 XAGE2Q96GT9 111 aa11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-248ENST00000637774 SLC27A2O14975 620 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 CYP19A1P11511 503 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 SKOR2Q2VWA4 1001 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 NLRP10Q86W26 655 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 RAB11FIP4Q86YS3 637 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 PHF14O94880 888 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 CRKLP46109 303 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 ZBTB38Q8NAP3 1195 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 AKAP2Q9Y2D5 859 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 TAF6LQ9Y6J9 622 aa11.55□□□□□ -0.56
CACNA1A-248ENST00000637774 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 MCMDC2Q4G0Z9 681 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 MARCH10Q8NA82 808 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 TRPM3Q9HCF6 1732 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 LARGE1O95461 756 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 RUFY3Q7L099 469 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 ATG9AQ7Z3C6 839 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 GJB2P29033 226 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 VPS53Q5VIR6 699 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 RNF214Q8ND24 703 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 FAM208AQ9UK61 1670 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-248ENST00000637774 ZAP70P43403 619 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 CASP7P55210 303 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 VPS37DQ86XT2 251 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 FAM184AQ8NB25 1140 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 ISCA1Q9BUE6 129 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 TRIM44Q96DX7 344 aaPredicted RBP11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 NEK1Q96PY6 1258 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 ABCF2Q9UG63 623 aa11.53□□□□□ -0.56
CACNA1A-248ENST00000637774 GOLGA6L4A6NEF3 574 aa11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 H3BQV1 296 aa11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 CEBPZQ03701 1054 aaKnown RBP11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 COL9A3Q14050 684 aaPredicted RBP11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 IFFO2Q5TF58 517 aa11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 TTLL5Q6EMB2 1281 aa11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 BRF1Q92994 677 aa11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 HAUS7Q99871 368 aa11.52□□□□□ -0.56
CACNA1A-248ENST00000637774 CTSWP56202 376 aa11.52□□□□□ -0.57
CACNA1A-248ENST00000637774 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
CACNA1A-248ENST00000637774 MAP4K1Q92918 833 aa11.52□□□□□ -0.57
CACNA1A-248ENST00000637774 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
CACNA1A-248ENST00000637774 PTMSP20962 102 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 ME3Q16798 604 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 FAM173BQ6P4H8 233 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 ALS2Q96Q42 1657 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms