RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 TMC4Q7Z404 712 aa25.95■■□□□ 1.74
CLN6-222ENST00000637667 CHMP4AQ9BY43 222 aa25.95■■□□□ 1.74
CLN6-222ENST00000637667 LMOD1P29536 600 aaPredicted RBP25.94■■□□□ 1.74
CLN6-222ENST00000637667 CCDC27Q2M243 656 aa25.94■■□□□ 1.74
CLN6-222ENST00000637667 RTL5Q5HYW3 569 aaPredicted RBP25.94■■□□□ 1.74
CLN6-222ENST00000637667 CCDC30Q5VVM6 783 aa25.94■■□□□ 1.74
CLN6-222ENST00000637667 IRS4O14654 1257 aaPredicted RBP25.93■■□□□ 1.74
CLN6-222ENST00000637667 ITGBL1O95965 494 aaPredicted RBP25.93■■□□□ 1.74
CLN6-222ENST00000637667 SCNN1DP51172 638 aa25.93■■□□□ 1.74
CLN6-222ENST00000637667 TSPYL6Q8N831 410 aa25.93■■□□□ 1.74
CLN6-222ENST00000637667 ZNRF3Q9ULT6 936 aa25.93■■□□□ 1.74
CLN6-222ENST00000637667 ZNF316A6NFI3 1004 aaPredicted RBP25.91■■□□□ 1.74
CLN6-222ENST00000637667 KIAA2012Q0VF49 1180 aa25.91■■□□□ 1.74
CLN6-222ENST00000637667 WWC1Q8IX03 1113 aa25.91■■□□□ 1.74
CLN6-222ENST00000637667 ZBTB38Q8NAP3 1195 aaPredicted RBP25.91■■□□□ 1.74
CLN6-222ENST00000637667 TSR2Q969E8 191 aaKnown RBP25.91■■□□□ 1.74
CLN6-222ENST00000637667 MYD88Q99836 296 aa25.91■■□□□ 1.74
CLN6-222ENST00000637667 MRS2Q9HD23 443 aa25.91■■□□□ 1.74
CLN6-222ENST00000637667 EPS15P42566 896 aa25.9■■□□□ 1.74
CLN6-222ENST00000637667 MAP1SQ66K74 1059 aaPredicted RBP25.9■■□□□ 1.74
CLN6-222ENST00000637667 CELF1Q92879 486 aaKnown RBP25.9■■□□□ 1.74
CLN6-222ENST00000637667 DDX60Q8IY21 1712 aaKnown RBP25.9■■□□□ 1.74
CLN6-222ENST00000637667 ADAMTSL1Q8N6G6 1762 aa25.9■■□□□ 1.74
CLN6-222ENST00000637667 ANP32CO43423 234 aa25.89■■□□□ 1.74
CLN6-222ENST00000637667 DDX58O95786 925 aaKnown RBP25.89■■□□□ 1.74
CLN6-222ENST00000637667 CXCL9Q07325 125 aa25.89■■□□□ 1.74
CLN6-222ENST00000637667 CNTROBQ8N137 903 aa25.89■■□□□ 1.74
CLN6-222ENST00000637667 CCDC191Q8NCU4 936 aa25.89■■□□□ 1.74
CLN6-222ENST00000637667 HSP90B1P14625 803 aaKnown RBP25.88■■□□□ 1.73
CLN6-222ENST00000637667 METTL22Q9BUU2 404 aaPredicted RBP25.88■■□□□ 1.73
CLN6-222ENST00000637667 MKRN1Q9UHC7 482 aaKnown RBP25.88■■□□□ 1.73
CLN6-222ENST00000637667 TMEM88BA6NKF7 163 aa25.87■■□□□ 1.73
CLN6-222ENST00000637667 LTBP1Q14766 1721 aa25.87■■□□□ 1.73
CLN6-222ENST00000637667 PCNTO95613 3336 aa25.86■■□□□ 1.73
CLN6-222ENST00000637667 TAF1P21675 1872 aa25.86■■□□□ 1.73
CLN6-222ENST00000637667 PCCAP05165 728 aaPredicted RBP25.86■■□□□ 1.73
CLN6-222ENST00000637667 NCBP3Q53F19 620 aaKnown RBP25.86■■□□□ 1.73
CLN6-222ENST00000637667 CWC25Q9NXE8 425 aaPredicted RBP25.86■■□□□ 1.73
CLN6-222ENST00000637667 IL16Q14005 1332 aa25.86■■□□□ 1.73
CLN6-222ENST00000637667 RPS8P62241 208 aaKnown RBP25.85■■□□□ 1.73
CLN6-222ENST00000637667 CIAPIN1Q6FI81 312 aa25.85■■□□□ 1.73
CLN6-222ENST00000637667 USP50Q70EL3 339 aaPredicted RBP25.85■■□□□ 1.73
CLN6-222ENST00000637667 STK31Q9BXU1 1019 aa25.85■■□□□ 1.73
CLN6-222ENST00000637667 GPRC5DQ9NZD1 345 aa25.85■■□□□ 1.73
CLN6-222ENST00000637667 NSFL1CQ9UNZ2 370 aaKnown RBP25.85■■□□□ 1.73
CLN6-222ENST00000637667 DUOX1Q9NRD9 1551 aa25.85■■□□□ 1.73
CLN6-222ENST00000637667 CNTNAP1P78357 1384 aa25.84■■□□□ 1.73
CLN6-222ENST00000637667 RAD17O75943 681 aa25.84■■□□□ 1.73
CLN6-222ENST00000637667 MAP3K2Q9Y2U5 619 aa25.84■■□□□ 1.73
CLN6-222ENST00000637667 LRRC37AA6NMS7 1700 aa25.83■■□□□ 1.73
CLN6-222ENST00000637667 HSPA1AP0DMV8 641 aaKnown RBP25.83■■□□□ 1.73
CLN6-222ENST00000637667 HSPA1BP0DMV9 641 aaKnown RBP25.83■■□□□ 1.73
CLN6-222ENST00000637667 GMPSP49915 693 aaPredicted RBP25.83■■□□□ 1.73
CLN6-222ENST00000637667 TNIP1Q15025 636 aa25.83■■□□□ 1.73
CLN6-222ENST00000637667 TWISTNBQ3B726 338 aaPredicted RBP25.83■■□□□ 1.73
CLN6-222ENST00000637667 KSR2Q6VAB6 950 aa25.83■■□□□ 1.73
CLN6-222ENST00000637667 ADARB2Q9NS39 739 aaKnown RBP25.83■■□□□ 1.73
CLN6-222ENST00000637667 PI4KAP2A4QPH2 592 aa25.82■■□□□ 1.72
CLN6-222ENST00000637667 GPSM2P81274 684 aa25.82■■□□□ 1.72
CLN6-222ENST00000637667 WASHC4Q2M389 1173 aa25.82■■□□□ 1.72
CLN6-222ENST00000637667 PI4KAP1Q8N8J0 262 aa25.82■■□□□ 1.72
CLN6-222ENST00000637667 JARID2Q92833 1246 aaPredicted RBP25.82■■□□□ 1.72
CLN6-222ENST00000637667 COL4A1P02462 1669 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 YDJCA8MPS7 323 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 C6orf229H3BNL8 230 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 PDE8AO60658 829 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 CCDC152Q4G0S7 254 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 SEC31BQ9NQW1 1179 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 POLLQ9UGP5 575 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 CDHR2Q9BYE9 1310 aa25.81■■□□□ 1.72
CLN6-222ENST00000637667 BCL2L13Q9BXK5 485 aa25.8■■□□□ 1.72
CLN6-222ENST00000637667 IGKV5-2P06315 115 aa25.79■■□□□ 1.72
CLN6-222ENST00000637667 COL13A1Q5TAT6 717 aaPredicted RBP25.79■■□□□ 1.72
CLN6-222ENST00000637667 SLC4A2P04920 1241 aa25.78■■□□□ 1.72
CLN6-222ENST00000637667 NEXNQ0ZGT2 675 aa25.78■■□□□ 1.72
CLN6-222ENST00000637667 G2E3Q7L622 706 aa25.78■■□□□ 1.72
CLN6-222ENST00000637667 EYA3Q99504 573 aa25.78■■□□□ 1.72
CLN6-222ENST00000637667 RIMBP2O15034 1052 aa25.77■■□□□ 1.72
CLN6-222ENST00000637667 CAPN15O75808 1086 aa25.77■■□□□ 1.72
CLN6-222ENST00000637667 TBC1D16Q8TBP0 767 aa25.77■■□□□ 1.72
CLN6-222ENST00000637667 CCDC85AQ96PX6 553 aaPredicted RBP25.77■■□□□ 1.72
CLN6-222ENST00000637667 DBNDD1Q9H9R9 158 aa25.77■■□□□ 1.72
CLN6-222ENST00000637667 SALL2Q9Y467 1007 aaPredicted RBP25.77■■□□□ 1.72
CLN6-222ENST00000637667 FANCIQ9NVI1 1328 aa25.77■■□□□ 1.72
CLN6-222ENST00000637667 VEGFBP49765 207 aa25.76■■□□□ 1.71
CLN6-222ENST00000637667 WDR63Q8IWG1 891 aa25.76■■□□□ 1.71
CLN6-222ENST00000637667 PODXL2Q9NZ53 605 aa25.76■■□□□ 1.71
CLN6-222ENST00000637667 RASSF10A6NK89 507 aa25.75■■□□□ 1.71
CLN6-222ENST00000637667 FMR1Q06787 632 aaKnown RBP eCLIP25.75■■□□□ 1.71
CLN6-222ENST00000637667 GPR101Q96P66 508 aaPredicted RBP25.75■■□□□ 1.71
CLN6-222ENST00000637667 ABT1Q9ULW3 272 aaKnown RBP25.75■■□□□ 1.71
CLN6-222ENST00000637667 NEURL1BA8MQ27 555 aa25.74■■□□□ 1.71
CLN6-222ENST00000637667 TRAF5O00463 557 aa25.74■■□□□ 1.71
CLN6-222ENST00000637667 PSMD14O00487 310 aa25.74■■□□□ 1.71
CLN6-222ENST00000637667 CTSWP56202 376 aa25.74■■□□□ 1.71
CLN6-222ENST00000637667 CWF19L2Q2TBE0 894 aaKnown RBP25.74■■□□□ 1.71
CLN6-222ENST00000637667 ANKIB1Q9P2G1 1089 aa25.74■■□□□ 1.71
CLN6-222ENST00000637667 CNOT7Q9UIV1 285 aaKnown RBP25.74■■□□□ 1.71
CLN6-222ENST00000637667 ECE2O60344 883 aa25.73■■□□□ 1.71
CLN6-222ENST00000637667 UFL1O94874 794 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms