RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 ANXA1P04083 346 aa11.52□□□□□ -0.57
CLN8-214ENST00000637594 HSPA8P11142 646 aaKnown RBP11.52□□□□□ -0.57
CLN8-214ENST00000637594 HCLS1P14317 486 aaPredicted RBP11.52□□□□□ -0.57
CLN8-214ENST00000637594 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
CLN8-214ENST00000637594 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.57
CLN8-214ENST00000637594 PLBD2Q8NHP8 589 aa11.52□□□□□ -0.57
CLN8-214ENST00000637594 TRMT112Q9UI30 125 aaKnown RBP11.52□□□□□ -0.57
CLN8-214ENST00000637594 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
CLN8-214ENST00000637594 FMR1Q06787 632 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLN8-214ENST00000637594 AIMP1Q12904 312 aaKnown RBP11.51□□□□□ -0.57
CLN8-214ENST00000637594 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
CLN8-214ENST00000637594 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
CLN8-214ENST00000637594 SAPCD2Q86UD0 394 aa11.51□□□□□ -0.57
CLN8-214ENST00000637594 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
CLN8-214ENST00000637594 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
CLN8-214ENST00000637594 GPR101Q96P66 508 aaPredicted RBP11.51□□□□□ -0.57
CLN8-214ENST00000637594 ISCA1Q9BUE6 129 aa11.51□□□□□ -0.57
CLN8-214ENST00000637594 TRAF5O00463 557 aa11.5□□□□□ -0.57
CLN8-214ENST00000637594 GMPSP49915 693 aaPredicted RBP11.5□□□□□ -0.57
CLN8-214ENST00000637594 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
CLN8-214ENST00000637594 DPF2Q92785 391 aa11.5□□□□□ -0.57
CLN8-214ENST00000637594 DBF4Q9UBU7 674 aaPredicted RBP11.5□□□□□ -0.57
CLN8-214ENST00000637594 YDJCA8MPS7 323 aa11.49□□□□□ -0.57
CLN8-214ENST00000637594 CYP4F22Q6NT55 531 aa11.49□□□□□ -0.57
CLN8-214ENST00000637594 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
CLN8-214ENST00000637594 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
CLN8-214ENST00000637594 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
CLN8-214ENST00000637594 HYPKQ9NX55 129 aa11.49□□□□□ -0.57
CLN8-214ENST00000637594 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
CLN8-214ENST00000637594 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
CLN8-214ENST00000637594 MYBBP1AQ9BQG0 1328 aaKnown RBP11.49□□□□□ -0.57
CLN8-214ENST00000637594 H7C1D1 291 aa11.48□□□□□ -0.57
CLN8-214ENST00000637594 CA12O43570 354 aa11.48□□□□□ -0.57
CLN8-214ENST00000637594 RAD17O75943 681 aa11.48□□□□□ -0.57
CLN8-214ENST00000637594 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
CLN8-214ENST00000637594 WASHC4Q2M389 1173 aa11.48□□□□□ -0.57
CLN8-214ENST00000637594 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
CLN8-214ENST00000637594 ANKRD36CQ5JPF3 1778 aa11.48□□□□□ -0.57
CLN8-214ENST00000637594 CELF2O95319 508 aaKnown RBP11.47□□□□□ -0.57
CLN8-214ENST00000637594 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
CLN8-214ENST00000637594 NEUROD2Q15784 382 aa11.47□□□□□ -0.57
CLN8-214ENST00000637594 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
CLN8-214ENST00000637594 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
CLN8-214ENST00000637594 ABHD8Q96I13 439 aa11.47□□□□□ -0.57
CLN8-214ENST00000637594 BCL2L13Q9BXK5 485 aa11.47□□□□□ -0.57
CLN8-214ENST00000637594 ADAMTS8Q9UP79 889 aa11.47□□□□□ -0.57
CLN8-214ENST00000637594 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
CLN8-214ENST00000637594 BRPF1P55201 1214 aaPredicted RBP11.46□□□□□ -0.57
CLN8-214ENST00000637594 RPS8P62241 208 aaKnown RBP11.46□□□□□ -0.57
CLN8-214ENST00000637594 DUSP27Q5VZP5 1158 aa11.46□□□□□ -0.57
CLN8-214ENST00000637594 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
CLN8-214ENST00000637594 CELF1Q92879 486 aaKnown RBP11.46□□□□□ -0.57
CLN8-214ENST00000637594 GLIS2Q9BZE0 524 aaPredicted RBP11.46□□□□□ -0.57
CLN8-214ENST00000637594 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
CLN8-214ENST00000637594 POLLQ9UGP5 575 aa11.46□□□□□ -0.57
CLN8-214ENST00000637594 NSFL1CQ9UNZ2 370 aaKnown RBP11.46□□□□□ -0.57
CLN8-214ENST00000637594 THSD7BQ9C0I4 1608 aa11.46□□□□□ -0.58
CLN8-214ENST00000637594 PSMD14O00487 310 aa11.45□□□□□ -0.58
CLN8-214ENST00000637594 HSP90B1P14625 803 aaKnown RBP11.45□□□□□ -0.58
CLN8-214ENST00000637594 RGS19P49795 217 aa11.45□□□□□ -0.58
CLN8-214ENST00000637594 MICALL2Q8IY33 904 aa11.45□□□□□ -0.58
CLN8-214ENST00000637594 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
CLN8-214ENST00000637594 TRPM4Q8TD43 1214 aa11.45□□□□□ -0.58
CLN8-214ENST00000637594 EYA3Q99504 573 aa11.45□□□□□ -0.58
CLN8-214ENST00000637594 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
CLN8-214ENST00000637594 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
CLN8-214ENST00000637594 AOC2O75106 756 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 VIL1P09327 827 aaKnown RBP11.44□□□□□ -0.58
CLN8-214ENST00000637594 GPSM2P81274 684 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
CLN8-214ENST00000637594 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLN8-214ENST00000637594 PAXIP1Q6ZW49 1069 aaPredicted RBP11.44□□□□□ -0.58
CLN8-214ENST00000637594 USP48Q86UV5 1035 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 TBC1D16Q8TBP0 767 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
CLN8-214ENST00000637594 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
CLN8-214ENST00000637594 DUOX1Q9NRD9 1551 aa11.43□□□□□ -0.58
CLN8-214ENST00000637594 SHTN1A0MZ66 631 aa11.43□□□□□ -0.58
CLN8-214ENST00000637594 NOGQ13253 232 aa11.43□□□□□ -0.58
CLN8-214ENST00000637594 CCDC191Q8NCU4 936 aa11.43□□□□□ -0.58
CLN8-214ENST00000637594 KCNQ5Q9NR82 932 aa11.43□□□□□ -0.58
CLN8-214ENST00000637594 IFT57Q9NWB7 429 aa11.43□□□□□ -0.58
CLN8-214ENST00000637594 LAMB2P55268 1798 aa11.43□□□□□ -0.58
CLN8-214ENST00000637594 C6orf229H3BNL8 230 aa11.42□□□□□ -0.58
CLN8-214ENST00000637594 ECE2O60344 883 aa11.42□□□□□ -0.58
CLN8-214ENST00000637594 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
CLN8-214ENST00000637594 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
CLN8-214ENST00000637594 RIC3Q7Z5B4 369 aa11.42□□□□□ -0.58
CLN8-214ENST00000637594 ZC3H12CQ9C0D7 883 aaKnown RBP11.42□□□□□ -0.58
CLN8-214ENST00000637594 DBNDD1Q9H9R9 158 aa11.42□□□□□ -0.58
CLN8-214ENST00000637594 LRRC37AA6NMS7 1700 aa11.42□□□□□ -0.58
CLN8-214ENST00000637594 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
CLN8-214ENST00000637594 FAM155AB1AL88 458 aaPredicted RBP11.41□□□□□ -0.58
CLN8-214ENST00000637594 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
CLN8-214ENST00000637594 PDE8AO60658 829 aa11.41□□□□□ -0.58
CLN8-214ENST00000637594 EGFRP00533 1210 aa11.41□□□□□ -0.58
CLN8-214ENST00000637594 PCCAP05165 728 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms