RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
PNKP-228ENST00000637325 SNED1Q8TER0 1413 aa17.66■□□□□ 0.42
PNKP-228ENST00000637325 PCCAP05165 728 aaPredicted RBP17.66■□□□□ 0.42
PNKP-228ENST00000637325 FSTL1Q12841 308 aa17.66■□□□□ 0.42
PNKP-228ENST00000637325 FLIIQ13045 1269 aa17.66■□□□□ 0.42
PNKP-228ENST00000637325 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
PNKP-228ENST00000637325 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
PNKP-228ENST00000637325 TMC4Q7Z404 712 aa17.66■□□□□ 0.42
PNKP-228ENST00000637325 MPNDQ8N594 471 aa17.66■□□□□ 0.42
PNKP-228ENST00000637325 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
PNKP-228ENST00000637325 EIF6P56537 245 aaKnown RBP17.65■□□□□ 0.42
PNKP-228ENST00000637325 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
PNKP-228ENST00000637325 SMC1BQ8NDV3 1235 aa17.65■□□□□ 0.42
PNKP-228ENST00000637325 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
PNKP-228ENST00000637325 POTECB2RU33 542 aa17.64■□□□□ 0.41
PNKP-228ENST00000637325 CCER2I3L3R5 266 aa17.64■□□□□ 0.41
PNKP-228ENST00000637325 FZD9O00144 591 aa17.64■□□□□ 0.41
PNKP-228ENST00000637325 PPIP5K2O43314 1243 aa17.64■□□□□ 0.41
PNKP-228ENST00000637325 PDE8AO60658 829 aa17.64■□□□□ 0.41
PNKP-228ENST00000637325 NIM1KQ8IY84 436 aa17.64■□□□□ 0.41
PNKP-228ENST00000637325 ZNF541Q9H0D2 1346 aa17.64■□□□□ 0.41
PNKP-228ENST00000637325 IQCA1LA6NCM1 817 aa17.63■□□□□ 0.41
PNKP-228ENST00000637325 IGKV5-2P06315 115 aa17.63■□□□□ 0.41
PNKP-228ENST00000637325 CCDC152Q4G0S7 254 aa17.63■□□□□ 0.41
PNKP-228ENST00000637325 CELF1Q92879 486 aaKnown RBP17.63■□□□□ 0.41
PNKP-228ENST00000637325 VPS33BQ9H267 617 aa17.63■□□□□ 0.41
PNKP-228ENST00000637325 APLP1P51693 650 aa17.62■□□□□ 0.41
PNKP-228ENST00000637325 AOC3Q16853 763 aa17.62■□□□□ 0.41
PNKP-228ENST00000637325 CWF19L2Q2TBE0 894 aaKnown RBP17.62■□□□□ 0.41
PNKP-228ENST00000637325 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
PNKP-228ENST00000637325 GJA3Q9Y6H8 435 aa17.62■□□□□ 0.41
PNKP-228ENST00000637325 LRRC37AA6NMS7 1700 aa17.61■□□□□ 0.41
PNKP-228ENST00000637325 NEURL1BA8MQ27 555 aa17.61■□□□□ 0.41
PNKP-228ENST00000637325 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
PNKP-228ENST00000637325 L3MBTL3Q96JM7 780 aaPredicted RBP17.61■□□□□ 0.41
PNKP-228ENST00000637325 CCDC85AQ96PX6 553 aaPredicted RBP17.61■□□□□ 0.41
PNKP-228ENST00000637325 RTFDC1Q9BY42 306 aaPredicted RBP17.61■□□□□ 0.41
PNKP-228ENST00000637325 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
PNKP-228ENST00000637325 CDHR2Q9BYE9 1310 aa17.61■□□□□ 0.41
PNKP-228ENST00000637325 GPC2Q8N158 579 aa17.6■□□□□ 0.41
PNKP-228ENST00000637325 NSFL1CQ9UNZ2 370 aaKnown RBP17.6■□□□□ 0.41
PNKP-228ENST00000637325 SPEF2Q9C093 1822 aa17.6■□□□□ 0.41
PNKP-228ENST00000637325 COL4A5P29400 1685 aa17.59■□□□□ 0.41
PNKP-228ENST00000637325 E9PSI1 815 aa17.59■□□□□ 0.41
PNKP-228ENST00000637325 UBE3BQ7Z3V4 1068 aa17.59■□□□□ 0.41
PNKP-228ENST00000637325 SEC31BQ9NQW1 1179 aa17.59■□□□□ 0.41
PNKP-228ENST00000637325 HACL1Q9UJ83 578 aa17.59■□□□□ 0.41
PNKP-228ENST00000637325 CEP350Q5VT06 3117 aa17.59■□□□□ 0.41
PNKP-228ENST00000637325 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
PNKP-228ENST00000637325 LMOD1P29536 600 aaPredicted RBP17.58■□□□□ 0.4
PNKP-228ENST00000637325 LINS1Q8NG48 757 aa17.58■□□□□ 0.4
PNKP-228ENST00000637325 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.4
PNKP-228ENST00000637325 H7C1W4 665 aa17.57■□□□□ 0.4
PNKP-228ENST00000637325 CTSWP56202 376 aa17.57■□□□□ 0.4
PNKP-228ENST00000637325 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
PNKP-228ENST00000637325 GCKRQ14397 625 aa17.57■□□□□ 0.4
PNKP-228ENST00000637325 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
PNKP-228ENST00000637325 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
PNKP-228ENST00000637325 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
PNKP-228ENST00000637325 ZNRF3Q9ULT6 936 aa17.57■□□□□ 0.4
PNKP-228ENST00000637325 COL4A1P02462 1669 aa17.56■□□□□ 0.4
PNKP-228ENST00000637325 F6X3S4 739 aa17.56■□□□□ 0.4
PNKP-228ENST00000637325 EPHX2P34913 555 aa17.56■□□□□ 0.4
PNKP-228ENST00000637325 GPSM2P81274 684 aa17.56■□□□□ 0.4
PNKP-228ENST00000637325 CDC5LQ99459 802 aaKnown RBP17.56■□□□□ 0.4
PNKP-228ENST00000637325 EYA3Q99504 573 aa17.56■□□□□ 0.4
PNKP-228ENST00000637325 ANKIB1Q9P2G1 1089 aa17.56■□□□□ 0.4
PNKP-228ENST00000637325 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
PNKP-228ENST00000637325 RIMBP2O15034 1052 aa17.55■□□□□ 0.4
PNKP-228ENST00000637325 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
PNKP-228ENST00000637325 WASHC4Q2M389 1173 aa17.55■□□□□ 0.4
PNKP-228ENST00000637325 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
PNKP-228ENST00000637325 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
PNKP-228ENST00000637325 POTEIP0CG38 1075 aa17.54■□□□□ 0.4
PNKP-228ENST00000637325 POTEJP0CG39 1038 aa17.54■□□□□ 0.4
PNKP-228ENST00000637325 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
PNKP-228ENST00000637325 PNMA8AQ86V59 439 aaPredicted RBP17.54■□□□□ 0.4
PNKP-228ENST00000637325 POLLQ9UGP5 575 aa17.54■□□□□ 0.4
PNKP-228ENST00000637325 DUOX1Q9NRD9 1551 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 G3V3G9 751 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 CXCL9Q07325 125 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 TNIP1Q15025 636 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 DCAF8Q5TAQ9 597 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 CIAPIN1Q6FI81 312 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 GREM2Q9H772 168 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 GGA1Q9UJY5 639 aa17.53■□□□□ 0.4
PNKP-228ENST00000637325 LTBP1Q14766 1721 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 RAD17O75943 681 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 UFL1O94874 794 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 HTRA3P83110 453 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 BEND3Q5T5X7 828 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 BCL2L13Q9BXK5 485 aa17.52■□□□□ 0.4
PNKP-228ENST00000637325 ZC3H12CQ9C0D7 883 aaKnown RBP17.52■□□□□ 0.4
PNKP-228ENST00000637325 IGHMBP2P38935 993 aaKnown RBP17.51■□□□□ 0.39
PNKP-228ENST00000637325 DBNDD1Q9H9R9 158 aa17.51■□□□□ 0.39
PNKP-228ENST00000637325 PODXL2Q9NZ53 605 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms