RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 HOXA10P31260 410 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 RRP1P56182 461 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 SF3B3Q15393 1217 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 PRPF40BQ6NWY9 871 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 FTSJ3Q8IY81 847 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 CLUAP1Q96AJ1 413 aa11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 CCDC85AQ96PX6 553 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 CRAMP1Q96RY5 1269 aa11.58□□□□□ -0.56
CACNA1A-239ENST00000637297 BBOX1O75936 387 aa11.57□□□□□ -0.56
CACNA1A-239ENST00000637297 TRIM27P14373 513 aa11.57□□□□□ -0.56
CACNA1A-239ENST00000637297 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-239ENST00000637297 HDAC5Q9UQL6 1122 aa11.57□□□□□ -0.56
CACNA1A-239ENST00000637297 CHMP3Q9Y3E7 222 aa11.57□□□□□ -0.56
CACNA1A-239ENST00000637297 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
CACNA1A-239ENST00000637297 PPEF1O14829 653 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-239ENST00000637297 MS4A1P11836 297 aa11.56□□□□□ -0.56
CACNA1A-239ENST00000637297 CTSWP56202 376 aa11.56□□□□□ -0.56
CACNA1A-239ENST00000637297 GRAPQ13588 217 aa11.56□□□□□ -0.56
CACNA1A-239ENST00000637297 GRAPLQ8TC17 118 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-239ENST00000637297 ABCC4O15439 1325 aa11.56□□□□□ -0.56
CACNA1A-239ENST00000637297 CCDC93Q567U6 631 aa11.55□□□□□ -0.56
CACNA1A-239ENST00000637297 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
CACNA1A-239ENST00000637297 DZIP1LQ8IYY4 767 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-239ENST00000637297 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
CACNA1A-239ENST00000637297 PLA2G12BQ9BX93 195 aa11.55□□□□□ -0.56
CACNA1A-239ENST00000637297 SRCAPQ6ZRS2 3230 aa11.55□□□□□ -0.56
CACNA1A-239ENST00000637297 NBPF7P0C2Y1 421 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 CASP7P55210 303 aa11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 RPS8P62241 208 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 TAF7LQ5H9L4 462 aa11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 INTS3Q68E01 1043 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 TMC4Q7Z404 712 aa11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 ANKRD18AQ8IVF6 992 aa11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 RTKN2Q8IZC4 609 aa11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 CDC5LQ99459 802 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
CACNA1A-239ENST00000637297 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 GNAI3P08754 354 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 LMBR1LQ6UX01 489 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 SP8Q8IXZ3 490 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 TMEM57Q8N5G2 664 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 CELF1Q92879 486 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 SUCLG2Q96I99 432 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 MPHOSPH8Q99549 860 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 GREM2Q9H772 168 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 UTYO14607 1347 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 SBF1O95248 1867 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
CACNA1A-239ENST00000637297 SPEF2Q9C093 1822 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 PLIN1O60240 522 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 CSF1RP07333 972 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 ITGA6P23229 1130 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 FOXO4P98177 505 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 TAOK3Q9H2K8 898 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 ATP6V0A2Q9Y487 856 aa11.52□□□□□ -0.57
CACNA1A-239ENST00000637297 RASSF7Q02833 373 aa11.51□□□□□ -0.57
CACNA1A-239ENST00000637297 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
CACNA1A-239ENST00000637297 OLFM4Q6UX06 510 aa11.51□□□□□ -0.57
CACNA1A-239ENST00000637297 MPNDQ8N594 471 aa11.51□□□□□ -0.57
CACNA1A-239ENST00000637297 BICC1Q9H694 974 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-239ENST00000637297 NSFL1CQ9UNZ2 370 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-239ENST00000637297 LMNB1P20700 586 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 YY1P25490 414 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 EPHA10Q5JZY3 1008 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 DPP8Q6V1X1 898 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 PANK1Q8TE04 598 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 MEIS3Q99687 375 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 ANKIB1Q9P2G1 1089 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
CACNA1A-239ENST00000637297 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-239ENST00000637297 GNAI2P04899 355 aa11.49□□□□□ -0.57
CACNA1A-239ENST00000637297 RLBP1P12271 317 aa11.49□□□□□ -0.57
CACNA1A-239ENST00000637297 C9orf131Q5VYM1 1079 aa11.49□□□□□ -0.57
CACNA1A-239ENST00000637297 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-239ENST00000637297 BSDC1Q9NW68 430 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-239ENST00000637297 LRRFIP2Q9Y608 721 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-239ENST00000637297 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 NFKBIEO00221 500 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 PSMD1Q99460 953 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 ZNF277Q9NRM2 450 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 DDX19BQ9UMR2 479 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
CACNA1A-239ENST00000637297 G3V3G9 751 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms