RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 DNAJC21Q5F1R6 531 aaKnown RBP12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 RRAGBQ5VZM2 374 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 INPP5BP32019 993 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 METAP2P50579 478 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 PTPN23Q9H3S7 1636 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 MYO1BO43795 1136 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 ZNF569Q5MCW4 686 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 MCM10Q7L590 875 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 CFAP57Q96MR6 1250 aa12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 ZEB2O60315 1214 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 KIF5AQ12840 1032 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 RHOXF2BP0C7M4 288 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 SEPT6Q14141 434 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 CATIPQ7Z7H3 387 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 NCOA7Q8NI08 942 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 RHOXF2Q9BQY4 288 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 NECAB1Q8N987 351 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 PHACTR2O75167 634 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 IKBKGQ9Y6K9 419 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 CTNNA2P26232 953 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 PDE1AP54750 535 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 DNAI2Q9GZS0 605 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
SMARCA2-258ENST00000637103 USP5P45974 858 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 MAP3K12Q12852 859 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 TOP2BQ02880 1626 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 F6X3S4 739 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 TNIP1Q15025 636 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 CFAP58Q5T655 872 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 CAMSAP2Q08AD1 1489 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 CLNS1AP54105 237 aaKnown RBP12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 PPFIBP2Q8ND30 876 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 SMC6Q96SB8 1091 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 UBA5Q9GZZ9 404 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
SMARCA2-258ENST00000637103 UBA7P41226 1012 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 MXRA7P84157 204 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 SETDB1Q15047 1291 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 MACROD2A1Z1Q3 448 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 ZNF500O60304 480 aaPredicted RBP12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 FLIIQ13045 1269 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 KARSQ15046 597 aaKnown RBP12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 STIM2Q9P246 746 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 IGHMBP2P38935 993 aaKnown RBP12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 TMEM67Q5HYA8 995 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 CNGA4Q8IV77 575 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.351e-10■■■■■ 53.5
SMARCA2-258ENST00000637103 ATP11AP98196 1134 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 PPP1R14CQ8TAE6 165 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 SREK1Q8WXA9 508 aaKnown RBP12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 BRF1Q92994 677 aa12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 BAG1Q99933 345 aaPredicted RBP12.86□□□□□ -0.35
SMARCA2-258ENST00000637103 ATF3P18847 181 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 TNNC1P63316 161 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 LZTFL1Q9NQ48 299 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 MINDY4BA8MYZ0 360 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 SETSIPP0DME0 302 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 TTF1Q15361 905 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 TRIM7Q9C029 511 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 IMPACTQ9P2X3 320 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 SPTLC2O15270 562 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 FERP16591 822 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 ELF2Q15723 593 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 STRN4Q9NRL3 753 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 CAPZA3Q96KX2 299 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
SMARCA2-258ENST00000637103 PSMA7O14818 248 aa12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 UTP14CQ5TAP6 766 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 NDUFAB1O14561 156 aa12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 MAP2K2P36507 400 aa12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 TBC1D5Q92609 795 aa12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 IQCGQ9H095 443 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 RBM8AQ9Y5S9 174 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-258ENST00000637103 CLGNO14967 610 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms