RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 BLOC1S2Q6QNY1 142 aa14.5□□□□□ -0.09
CLN8-212ENST00000637083 GPT2Q8TD30 523 aa14.5□□□□□ -0.09
CLN8-212ENST00000637083 HAUS7Q99871 368 aa14.5□□□□□ -0.09
CLN8-212ENST00000637083 A0A0D9SFI3 127 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 A1BGP04217 495 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 TTLL7Q6ZT98 887 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 FBXO3Q9UK99 471 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 RPAP1Q9BWH6 1393 aaPredicted RBP14.49□□□□□ -0.09
CLN8-212ENST00000637083 CIAO1O76071 339 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 ADCK5Q3MIX3 580 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 TMEM87AQ8NBN3 555 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
CLN8-212ENST00000637083 NUP188Q5SRE5 1749 aa14.49□□□□□ -0.09
CLN8-212ENST00000637083 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 TAF5LO75529 589 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 SYT1P21579 422 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 TRIM28Q13263 835 aaKnown RBP14.48□□□□□ -0.09
CLN8-212ENST00000637083 LRRFIP1Q32MZ4 808 aaKnown RBP14.48□□□□□ -0.09
CLN8-212ENST00000637083 MCMDC2Q4G0Z9 681 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 LRSAM1Q6UWE0 723 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 KIF6Q6ZMV9 814 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 FBXO41Q8TF61 875 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 DBNDD2Q9BQY9 259 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 BTG4Q9NY30 223 aa14.48□□□□□ -0.09
CLN8-212ENST00000637083 NHSL1Q5SYE7 1610 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 EYA2O00167 538 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 STARD3NLO95772 234 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 PDCP20941 246 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 CCDC83Q8IWF9 413 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 KBTBD3Q8NAB2 608 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
CLN8-212ENST00000637083 ISCA1Q9BUE6 129 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 ZBTB3Q9H5J0 574 aa14.47□□□□□ -0.09
CLN8-212ENST00000637083 F13A1P00488 732 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 RPS6KB1P23443 525 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 GJB2P29033 226 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 TCIRG1Q13488 830 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLN8-212ENST00000637083 NEUROD6Q96NK8 337 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 PPP1R9BQ96SB3 815 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 HELLSQ9NRZ9 838 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 SHANK3Q9BYB0 1731 aa14.46□□□□□ -0.09
CLN8-212ENST00000637083 LETM1O95202 739 aaPredicted RBP14.46□□□□□ -0.1
CLN8-212ENST00000637083 CPA1P15085 419 aa14.46□□□□□ -0.1
CLN8-212ENST00000637083 ATG9AQ7Z3C6 839 aa14.46□□□□□ -0.1
CLN8-212ENST00000637083 PALLDQ8WX93 1383 aa14.46□□□□□ -0.1
CLN8-212ENST00000637083 CCDC57Q2TAC2 916 aa14.45□□□□□ -0.1
CLN8-212ENST00000637083 HSP90AB3PQ58FF7 597 aa14.45□□□□□ -0.1
CLN8-212ENST00000637083 USP48Q86UV5 1035 aa14.45□□□□□ -0.1
CLN8-212ENST00000637083 SH3TC1Q8TE82 1336 aa14.45□□□□□ -0.1
CLN8-212ENST00000637083 TMEM63CQ9P1W3 806 aa14.45□□□□□ -0.1
CLN8-212ENST00000637083 AKAP2Q9Y2D5 859 aa14.45□□□□□ -0.1
CLN8-212ENST00000637083 HMGB1P09429 215 aaKnown RBP14.44□□□□□ -0.1
CLN8-212ENST00000637083 ME3Q16798 604 aa14.44□□□□□ -0.1
CLN8-212ENST00000637083 PAG1Q9NWQ8 432 aa14.44□□□□□ -0.1
CLN8-212ENST00000637083 CEP126Q9P2H0 1117 aa14.44□□□□□ -0.1
CLN8-212ENST00000637083 ZNF589Q86UQ0 364 aaPredicted RBP14.44□□□□□ -0.1
CLN8-212ENST00000637083 PIGBQ92521 554 aa14.44□□□□□ -0.1
CLN8-212ENST00000637083 PLA2G12BQ9BX93 195 aa14.44□□□□□ -0.1
CLN8-212ENST00000637083 TJP1Q07157 1748 aa14.44□□□□□ -0.1
CLN8-212ENST00000637083 PCCAP05165 728 aaPredicted RBP14.43□□□□□ -0.1
CLN8-212ENST00000637083 UBE2HP62256 183 aa14.43□□□□□ -0.1
CLN8-212ENST00000637083 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
CLN8-212ENST00000637083 NEK1Q96PY6 1258 aa14.43□□□□□ -0.1
CLN8-212ENST00000637083 RBM27Q9P2N5 1060 aaKnown RBP14.43□□□□□ -0.1
CLN8-212ENST00000637083 SYCE3A1L190 88 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 LARGE1O95461 756 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 IFIT1P09914 478 aaKnown RBP14.42□□□□□ -0.1
CLN8-212ENST00000637083 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
CLN8-212ENST00000637083 CCDC158Q5M9N0 1113 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 LARP6Q9BRS8 491 aaKnown RBP14.42□□□□□ -0.1
CLN8-212ENST00000637083 ASAP1Q9ULH1 1129 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 TPCN1Q9ULQ1 816 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 ZNF609O15014 1411 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 SPEF2Q9C093 1822 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 CLCN1P35523 988 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 LARP1BQ659C4 914 aaKnown RBP14.42□□□□□ -0.1
CLN8-212ENST00000637083 DDX46Q7L014 1031 aaKnown RBP14.42□□□□□ -0.1
CLN8-212ENST00000637083 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
CLN8-212ENST00000637083 DSCC1Q9BVC3 393 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 MTMR6Q9Y217 621 aa14.42□□□□□ -0.1
CLN8-212ENST00000637083 A0A1B0GUL7 405 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 TAF7LQ5H9L4 462 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 ZBTB38Q8NAP3 1195 aaPredicted RBP14.41□□□□□ -0.1
CLN8-212ENST00000637083 TSPY26PQ9H489 355 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 CDHR2Q9BYE9 1310 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 ESPNB1AK53 854 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 GOLIM4O00461 696 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 DNAJC10Q8IXB1 793 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 CHAMP1Q96JM3 812 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 RBSNQ9H1K0 784 aa14.41□□□□□ -0.1
CLN8-212ENST00000637083 RRAGDQ9NQL2 400 aaPredicted RBP14.41□□□□□ -0.1
CLN8-212ENST00000637083 NSFL1CQ9UNZ2 370 aaKnown RBP14.41□□□□□ -0.1
CLN8-212ENST00000637083 COL14A1Q05707 1796 aaKnown RBP14.4□□□□□ -0.1
CLN8-212ENST00000637083 TOGARAM1Q9Y4F4 1720 aa14.4□□□□□ -0.1
CLN8-212ENST00000637083 MAP3K15Q6ZN16 1313 aa14.4□□□□□ -0.1
CLN8-212ENST00000637083 LRP6O75581 1613 aa14.4□□□□□ -0.1
CLN8-212ENST00000637083 TIMM10P62072 90 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms