RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 NUTM1Q86Y26 1132 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 CCDC24Q8N4L8 307 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 AK7Q96M32 723 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 CWC25Q9NXE8 425 aaPredicted RBP10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 NEXNQ0ZGT2 675 aa10.15□□□□□ -0.78
CACNA1A-232ENST00000636966 APBB1O00213 710 aa10.15□□□□□ -0.78
CACNA1A-232ENST00000636966 NTSR2O95665 410 aa10.15□□□□□ -0.78
CACNA1A-232ENST00000636966 GNAI3P08754 354 aa10.15□□□□□ -0.78
CACNA1A-232ENST00000636966 BICDL1Q6ZP65 573 aa10.15□□□□□ -0.78
CACNA1A-232ENST00000636966 PA2G4Q9UQ80 394 aaKnown RBP10.15□□□□□ -0.78
CACNA1A-232ENST00000636966 DUOX1Q9NRD9 1551 aa10.15□□□□□ -0.79
CACNA1A-232ENST00000636966 HSP90AA1P07900 732 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 TRAPPC3LQ5T215 181 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 SMC5Q8IY18 1101 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 NIP7Q9Y221 180 aaKnown RBP eCLIP10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 RIC1Q4ADV7 1423 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 DSG3P32926 999 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 RFX5P48382 616 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 RABL6Q3YEC7 729 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 ZBTB38Q8NAP3 1195 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 SLKQ9H2G2 1235 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 MTX1Q13505 466 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 SSH3Q8TE77 659 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 EXOC6BQ9Y2D4 811 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 CCDC85AQ96PX6 553 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 DCTPP1Q9H773 170 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 TFCP2L1Q9NZI6 479 aa10.14□□□□□ -0.79
CACNA1A-232ENST00000636966 PSME4Q14997 1843 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 ABCC12Q96J65 1359 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 SRGAP3O43295 1099 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 NFIXQ14938 502 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 C16orf71Q8IYS4 520 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 SMARCA5O60264 1052 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 SSFA2P28290 1259 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 CLEC4GQ6UXB4 293 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 SPRYD3Q8NCJ5 442 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 TAF1P21675 1872 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 TNRC6CQ9HCJ0 1690 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 PCCAP05165 728 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 RFC4P35249 363 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 DDR1Q08345 913 aa10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 OTUD7AQ8TE49 926 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-232ENST00000636966 ERFEQ4G0M1 354 aa10.12□□□□□ -0.79
CACNA1A-232ENST00000636966 LMBR1LQ6UX01 489 aa10.12□□□□□ -0.79
CACNA1A-232ENST00000636966 TM4SF1P30408 202 aa10.12□□□□□ -0.79
CACNA1A-232ENST00000636966 TRMT112Q9UI30 125 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-232ENST00000636966 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
CACNA1A-232ENST00000636966 SLC15A2Q16348 729 aa10.12□□□□□ -0.79
CACNA1A-232ENST00000636966 ZNF594Q96JF6 807 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-232ENST00000636966 PTPN12Q05209 780 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 LAMB1P07942 1786 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 ZPR1O75312 459 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 NUCB1Q02818 461 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 TTLL11Q8NHH1 800 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 CSF1RP07333 972 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 MSL1Q68DK7 614 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 GREM2Q9H772 168 aa10.11□□□□□ -0.79
CACNA1A-232ENST00000636966 ANKRD31Q8N7Z5 1873 aa10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 IRS4O14654 1257 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 SASH1O94885 1247 aa10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 HSP90AB3PQ58FF7 597 aa10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 GCC1Q96CN9 775 aa10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 PLA2G12BQ9BX93 195 aa10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 PUS3Q9BZE2 481 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-232ENST00000636966 CDHR2Q9BYE9 1310 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 POLRMTO00411 1230 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 HSCBQ8IWL3 235 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 PKNOX2Q96KN3 472 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 UTP14AQ9BVJ6 771 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 SIL1Q9H173 461 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 DOCK2Q92608 1830 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 WTIPA6NIX2 430 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 C22orf23Q9BZE7 217 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 SEC31BQ9NQW1 1179 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 HMMRO75330 724 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 LRRC24Q50LG9 513 aa10.09□□□□□ -0.79
CACNA1A-232ENST00000636966 SH3TC1Q8TE82 1336 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 SEC24BO95487 1268 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 BAG6P46379 1132 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 CTSWP56202 376 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 TSHZ3Q63HK5 1081 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 ATG9AQ7Z3C6 839 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 CASC1Q6TDU7 716 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 SETDB2Q96T68 719 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 PRR5LQ6MZQ0 368 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 IL1RAPL2Q9NP60 686 aa10.08□□□□□ -0.8
CACNA1A-232ENST00000636966 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
CACNA1A-232ENST00000636966 SURF6O75683 361 aaKnown RBP10.07□□□□□ -0.8
CACNA1A-232ENST00000636966 PARP10Q53GL7 1025 aa10.07□□□□□ -0.8
CACNA1A-232ENST00000636966 ZNF652Q9Y2D9 606 aa10.07□□□□□ -0.8
CACNA1A-232ENST00000636966 NFKBIBQ15653 356 aa10.07□□□□□ -0.8
CACNA1A-232ENST00000636966 SPEF2Q9C093 1822 aa10.06□□□□□ -0.8
CACNA1A-232ENST00000636966 TLR7Q9NYK1 1049 aaKnown RBP10.06□□□□□ -0.8
CACNA1A-232ENST00000636966 PDE8AO60658 829 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms