RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 NPR1P16066 1061 aa20.1■□□□□ 0.81
CLN6-216ENST00000636876 FOXO4P98177 505 aa20.1■□□□□ 0.81
CLN6-216ENST00000636876 EPHA10Q5JZY3 1008 aa20.1■□□□□ 0.81
CLN6-216ENST00000636876 KAZALD1Q96I82 304 aa20.1■□□□□ 0.81
CLN6-216ENST00000636876 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
CLN6-216ENST00000636876 HDAC5Q9UQL6 1122 aa20.1■□□□□ 0.81
CLN6-216ENST00000636876 DLEC1Q9Y238 1755 aa20.09■□□□□ 0.81
CLN6-216ENST00000636876 KCNA3P22001 575 aa20.09■□□□□ 0.81
CLN6-216ENST00000636876 HOXA10P31260 410 aaPredicted RBP20.09■□□□□ 0.81
CLN6-216ENST00000636876 STYK1Q6J9G0 422 aa20.09■□□□□ 0.81
CLN6-216ENST00000636876 TTLL11Q8NHH1 800 aa20.09■□□□□ 0.81
CLN6-216ENST00000636876 RPGRQ92834 1020 aaKnown RBP20.09■□□□□ 0.81
CLN6-216ENST00000636876 MASTLQ96GX5 879 aa20.09■□□□□ 0.81
CLN6-216ENST00000636876 CSF1RP07333 972 aa20.08■□□□□ 0.81
CLN6-216ENST00000636876 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.81
CLN6-216ENST00000636876 LMBR1LQ6UX01 489 aa20.07■□□□□ 0.8
CLN6-216ENST00000636876 ANKRD44Q8N8A2 993 aa20.07■□□□□ 0.8
CLN6-216ENST00000636876 ZNF784Q8NCA9 323 aaPredicted RBP20.07■□□□□ 0.8
CLN6-216ENST00000636876 ZNF622Q969S3 477 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLN6-216ENST00000636876 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
CLN6-216ENST00000636876 BICC1Q9H694 974 aaKnown RBP20.07■□□□□ 0.8
CLN6-216ENST00000636876 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
CLN6-216ENST00000636876 RTL9Q8NET4 1388 aa20.07■□□□□ 0.8
CLN6-216ENST00000636876 GNAI2P04899 355 aa20.06■□□□□ 0.8
CLN6-216ENST00000636876 RABL6Q3YEC7 729 aaPredicted RBP20.06■□□□□ 0.8
CLN6-216ENST00000636876 DDX46Q7L014 1031 aaKnown RBP20.06■□□□□ 0.8
CLN6-216ENST00000636876 CCDC85AQ96PX6 553 aaPredicted RBP20.06■□□□□ 0.8
CLN6-216ENST00000636876 CRAMP1Q96RY5 1269 aa20.06■□□□□ 0.8
CLN6-216ENST00000636876 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
CLN6-216ENST00000636876 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
CLN6-216ENST00000636876 CNKSR1Q969H4 720 aa20.05■□□□□ 0.8
CLN6-216ENST00000636876 GREM2Q9H772 168 aa20.05■□□□□ 0.8
CLN6-216ENST00000636876 PIM2Q9P1W9 311 aa20.05■□□□□ 0.8
CLN6-216ENST00000636876 FAM161AQ3B820 660 aa20.04■□□□□ 0.8
CLN6-216ENST00000636876 TTLL6Q8N841 843 aa20.04■□□□□ 0.8
CLN6-216ENST00000636876 CRBNQ96SW2 442 aa20.04■□□□□ 0.8
CLN6-216ENST00000636876 ZBTB40Q9NUA8 1239 aa20.04■□□□□ 0.8
CLN6-216ENST00000636876 ALDH1B1P30837 517 aa20.03■□□□□ 0.8
CLN6-216ENST00000636876 GRAPQ13588 217 aa20.03■□□□□ 0.8
CLN6-216ENST00000636876 GRAPLQ8TC17 118 aaPredicted RBP20.03■□□□□ 0.8
CLN6-216ENST00000636876 SEC31BQ9NQW1 1179 aa20.03■□□□□ 0.8
CLN6-216ENST00000636876 CHMP3Q9Y3E7 222 aa20.03■□□□□ 0.8
CLN6-216ENST00000636876 GOLGB1Q14789 3259 aaKnown RBP20.02■□□□□ 0.8
CLN6-216ENST00000636876 DALRD3Q5D0E6 543 aaKnown RBP20.02■□□□□ 0.8
CLN6-216ENST00000636876 PRPF40BQ6NWY9 871 aaKnown RBP20.02■□□□□ 0.8
CLN6-216ENST00000636876 C1orf115Q9H7X2 142 aa20.02■□□□□ 0.8
CLN6-216ENST00000636876 TAF1P21675 1872 aa20.01■□□□□ 0.79
CLN6-216ENST00000636876 ITGA6P23229 1130 aa20.01■□□□□ 0.79
CLN6-216ENST00000636876 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
CLN6-216ENST00000636876 CDC5LQ99459 802 aaKnown RBP20.01■□□□□ 0.79
CLN6-216ENST00000636876 WWC3Q9ULE0 1092 aa20.01■□□□□ 0.79
CLN6-216ENST00000636876 COL4A1P02462 1669 aa20■□□□□ 0.79
CLN6-216ENST00000636876 SLX4Q8IY92 1834 aa20■□□□□ 0.79
CLN6-216ENST00000636876 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
CLN6-216ENST00000636876 MTX1Q13505 466 aa20■□□□□ 0.79
CLN6-216ENST00000636876 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
CLN6-216ENST00000636876 CELF1Q92879 486 aaKnown RBP20■□□□□ 0.79
CLN6-216ENST00000636876 CACNA1SQ13698 1873 aa20■□□□□ 0.79
CLN6-216ENST00000636876 BBOX1O75936 387 aa19.99■□□□□ 0.79
CLN6-216ENST00000636876 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
CLN6-216ENST00000636876 ANKRD18AQ8IVF6 992 aa19.99■□□□□ 0.79
CLN6-216ENST00000636876 BCS1LQ9Y276 419 aa19.99■□□□□ 0.79
CLN6-216ENST00000636876 PPEF1O14829 653 aaPredicted RBP19.98■□□□□ 0.79
CLN6-216ENST00000636876 IRX6P78412 446 aaPredicted RBP19.98■□□□□ 0.79
CLN6-216ENST00000636876 GPR162Q16538 588 aa19.98■□□□□ 0.79
CLN6-216ENST00000636876 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
CLN6-216ENST00000636876 TMC4Q7Z404 712 aa19.97■□□□□ 0.79
CLN6-216ENST00000636876 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
CLN6-216ENST00000636876 C7orf43Q8WVR3 580 aa19.97■□□□□ 0.79
CLN6-216ENST00000636876 SRGAP3O43295 1099 aa19.96■□□□□ 0.79
CLN6-216ENST00000636876 IGHMBP2P38935 993 aaKnown RBP19.96■□□□□ 0.79
CLN6-216ENST00000636876 RFX5P48382 616 aaPredicted RBP19.96■□□□□ 0.79
CLN6-216ENST00000636876 ATP8B2P98198 1209 aa19.96■□□□□ 0.79
CLN6-216ENST00000636876 TAF7LQ5H9L4 462 aa19.96■□□□□ 0.79
CLN6-216ENST00000636876 PELP1Q8IZL8 1130 aaKnown RBP19.96■□□□□ 0.79
CLN6-216ENST00000636876 ARFGEF1Q9Y6D6 1849 aa19.96■□□□□ 0.79
CLN6-216ENST00000636876 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
CLN6-216ENST00000636876 C21orf2O43822 256 aa19.95■□□□□ 0.78
CLN6-216ENST00000636876 ZNF594Q96JF6 807 aaPredicted RBP19.95■□□□□ 0.78
CLN6-216ENST00000636876 BSDC1Q9NW68 430 aaPredicted RBP19.95■□□□□ 0.78
CLN6-216ENST00000636876 ZNF219Q9P2Y4 722 aaPredicted RBP19.95■□□□□ 0.78
CLN6-216ENST00000636876 ATP6V0A2Q9Y487 856 aa19.95■□□□□ 0.78
CLN6-216ENST00000636876 YBX3P16989 372 aaKnown RBP eCLIP19.94■□□□□ 0.78
CLN6-216ENST00000636876 PTPN12Q05209 780 aaKnown RBP19.94■□□□□ 0.78
CLN6-216ENST00000636876 AAMPQ13685 434 aa19.94■□□□□ 0.78
CLN6-216ENST00000636876 SLC51AQ86UW1 340 aa19.94■□□□□ 0.78
CLN6-216ENST00000636876 SP8Q8IXZ3 490 aa19.94■□□□□ 0.78
CLN6-216ENST00000636876 MPHOSPH8Q99549 860 aa19.94■□□□□ 0.78
CLN6-216ENST00000636876 SPEF2Q9C093 1822 aa19.94■□□□□ 0.78
CLN6-216ENST00000636876 POLA2Q14181 598 aa19.93■□□□□ 0.78
CLN6-216ENST00000636876 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
CLN6-216ENST00000636876 OLFM4Q6UX06 510 aa19.93■□□□□ 0.78
CLN6-216ENST00000636876 RPAP2Q8IXW5 612 aaPredicted RBP19.93■□□□□ 0.78
CLN6-216ENST00000636876 KLHDC4Q8TBB5 520 aa19.93■□□□□ 0.78
CLN6-216ENST00000636876 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
CLN6-216ENST00000636876 LRRC37AA6NMS7 1700 aa19.93■□□□□ 0.78
CLN6-216ENST00000636876 CCDC93Q567U6 631 aa19.92■□□□□ 0.78
CLN6-216ENST00000636876 CC2D2BQ6DHV5 1058 aa19.92■□□□□ 0.78
CLN6-216ENST00000636876 LDHAL6AQ6ZMR3 332 aa19.92■□□□□ 0.78
CLN6-216ENST00000636876 SIRT2Q8IXJ6 389 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms