RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 BBOX1O75936 387 aa26.29■■□□□ 1.8
CHRNA7-220ENST00000636850 IARSP41252 1262 aaKnown RBP26.29■■□□□ 1.8
CHRNA7-220ENST00000636850 CWF19L2Q2TBE0 894 aaKnown RBP26.29■■□□□ 1.8
CHRNA7-220ENST00000636850 SPEF2Q9C093 1822 aa26.29■■□□□ 1.8
CHRNA7-220ENST00000636850 NEURL1BA8MQ27 555 aa26.28■■□□□ 1.8
CHRNA7-220ENST00000636850 SLFN5Q08AF3 891 aa26.28■■□□□ 1.8
CHRNA7-220ENST00000636850 DNAAF4Q8WXU2 420 aa26.28■■□□□ 1.8
CHRNA7-220ENST00000636850 JARID2Q92833 1246 aaPredicted RBP26.28■■□□□ 1.8
CHRNA7-220ENST00000636850 CDHR2Q9BYE9 1310 aa26.27■■□□□ 1.8
CHRNA7-220ENST00000636850 COL4A5P29400 1685 aa26.26■■□□□ 1.79
CHRNA7-220ENST00000636850 DPY19L2Q6NUT2 758 aa26.26■■□□□ 1.79
CHRNA7-220ENST00000636850 RRAGCQ9HB90 399 aa26.26■■□□□ 1.79
CHRNA7-220ENST00000636850 PDE8AO60658 829 aa26.25■■□□□ 1.79
CHRNA7-220ENST00000636850 TMC4Q7Z404 712 aa26.25■■□□□ 1.79
CHRNA7-220ENST00000636850 SP8Q8IXZ3 490 aa26.25■■□□□ 1.79
CHRNA7-220ENST00000636850 C16orf71Q8IYS4 520 aaPredicted RBP26.25■■□□□ 1.79
CHRNA7-220ENST00000636850 CDCA7LQ96GN5 454 aa26.25■■□□□ 1.79
CHRNA7-220ENST00000636850 DUOX1Q9NRD9 1551 aa26.24■■□□□ 1.79
CHRNA7-220ENST00000636850 CELF1Q92879 486 aaKnown RBP26.24■■□□□ 1.79
CHRNA7-220ENST00000636850 LTBP1Q14766 1721 aa26.24■■□□□ 1.79
CHRNA7-220ENST00000636850 SCN4AP35499 1836 aa26.23■■□□□ 1.79
CHRNA7-220ENST00000636850 CCDC152Q4G0S7 254 aa26.23■■□□□ 1.79
CHRNA7-220ENST00000636850 LINS1Q8NG48 757 aa26.23■■□□□ 1.79
CHRNA7-220ENST00000636850 ZNF541Q9H0D2 1346 aa26.22■■□□□ 1.79
CHRNA7-220ENST00000636850 F6X3S4 739 aa26.22■■□□□ 1.79
CHRNA7-220ENST00000636850 TOMM70O94826 608 aa26.22■■□□□ 1.79
CHRNA7-220ENST00000636850 GCKRQ14397 625 aa26.22■■□□□ 1.79
CHRNA7-220ENST00000636850 DPP8Q6V1X1 898 aaPredicted RBP26.22■■□□□ 1.79
CHRNA7-220ENST00000636850 UBE3BQ7Z3V4 1068 aa26.22■■□□□ 1.79
CHRNA7-220ENST00000636850 CTSWP56202 376 aa26.21■■□□□ 1.79
CHRNA7-220ENST00000636850 LARGE2Q8N3Y3 721 aa26.21■■□□□ 1.79
CHRNA7-220ENST00000636850 MPNDQ8N594 471 aa26.21■■□□□ 1.79
CHRNA7-220ENST00000636850 JDP2Q8WYK2 163 aa26.21■■□□□ 1.79
CHRNA7-220ENST00000636850 DDNO94850 711 aaPredicted RBP26.2■■□□□ 1.78
CHRNA7-220ENST00000636850 VEGFAP15692 232 aaPredicted RBP26.2■■□□□ 1.78
CHRNA7-220ENST00000636850 SUPT20HQ8NEM7 779 aa26.2■■□□□ 1.78
CHRNA7-220ENST00000636850 CCDC85AQ96PX6 553 aaPredicted RBP26.2■■□□□ 1.78
CHRNA7-220ENST00000636850 H7C1W4 665 aa26.19■■□□□ 1.78
CHRNA7-220ENST00000636850 PPIP5K2O43314 1243 aa26.19■■□□□ 1.78
CHRNA7-220ENST00000636850 RTFDC1Q9BY42 306 aaPredicted RBP26.19■■□□□ 1.78
CHRNA7-220ENST00000636850 SEC31BQ9NQW1 1179 aa26.19■■□□□ 1.78
CHRNA7-220ENST00000636850 RPS8P62241 208 aaKnown RBP26.18■■□□□ 1.78
CHRNA7-220ENST00000636850 AOC3Q16853 763 aa26.18■■□□□ 1.78
CHRNA7-220ENST00000636850 TRMT2AQ8IZ69 625 aaKnown RBP26.18■■□□□ 1.78
CHRNA7-220ENST00000636850 FZD9O00144 591 aa26.17■■□□□ 1.78
CHRNA7-220ENST00000636850 RBM46Q8TBY0 533 aaKnown RBP26.17■■□□□ 1.78
CHRNA7-220ENST00000636850 BEND3Q5T5X7 828 aa26.16■■□□□ 1.78
CHRNA7-220ENST00000636850 NIM1KQ8IY84 436 aa26.16■■□□□ 1.78
CHRNA7-220ENST00000636850 MRPL50Q8N5N7 158 aaKnown RBP26.16■■□□□ 1.78
CHRNA7-220ENST00000636850 POTECB2RU33 542 aa26.15■■□□□ 1.78
CHRNA7-220ENST00000636850 SSH1Q8WYL5 1049 aa26.15■■□□□ 1.78
CHRNA7-220ENST00000636850 VPS33BQ9H267 617 aa26.15■■□□□ 1.78
CHRNA7-220ENST00000636850 RTL9Q8NET4 1388 aa26.15■■□□□ 1.78
CHRNA7-220ENST00000636850 CASP7P55210 303 aa26.14■■□□□ 1.78
CHRNA7-220ENST00000636850 EIF6P56537 245 aaKnown RBP26.14■■□□□ 1.78
CHRNA7-220ENST00000636850 SLC4A10Q6U841 1118 aa26.14■■□□□ 1.78
CHRNA7-220ENST00000636850 TTLL11Q8NHH1 800 aa26.14■■□□□ 1.78
CHRNA7-220ENST00000636850 L3MBTL3Q96JM7 780 aaPredicted RBP26.14■■□□□ 1.78
CHRNA7-220ENST00000636850 BCL2L13Q9BXK5 485 aa26.14■■□□□ 1.78
CHRNA7-220ENST00000636850 ANKRD18AQ8IVF6 992 aa26.13■■□□□ 1.77
CHRNA7-220ENST00000636850 CDC5LQ99459 802 aaKnown RBP26.13■■□□□ 1.77
CHRNA7-220ENST00000636850 PLA2G12BQ9BX93 195 aa26.13■■□□□ 1.77
CHRNA7-220ENST00000636850 GREM2Q9H772 168 aa26.13■■□□□ 1.77
CHRNA7-220ENST00000636850 NSFL1CQ9UNZ2 370 aaKnown RBP26.13■■□□□ 1.77
CHRNA7-220ENST00000636850 GPSM2P81274 684 aa26.12■■□□□ 1.77
CHRNA7-220ENST00000636850 KIAA2012Q0VF49 1180 aa26.12■■□□□ 1.77
CHRNA7-220ENST00000636850 GPC2Q8N158 579 aa26.12■■□□□ 1.77
CHRNA7-220ENST00000636850 PTPRCP08575 1304 aa26.12■■□□□ 1.77
CHRNA7-220ENST00000636850 IQCA1LA6NCM1 817 aa26.11■■□□□ 1.77
CHRNA7-220ENST00000636850 HSPA6P17066 643 aa26.11■■□□□ 1.77
CHRNA7-220ENST00000636850 ALDH1L2Q3SY69 923 aa26.11■■□□□ 1.77
CHRNA7-220ENST00000636850 SMC4Q9NTJ3 1288 aa26.11■■□□□ 1.77
CHRNA7-220ENST00000636850 CT47B1P0C2W7 299 aaPredicted RBP26.1■■□□□ 1.77
CHRNA7-220ENST00000636850 HNRNPUQ00839 825 aaKnown RBP eCLIP26.1■■□□□ 1.77
CHRNA7-220ENST00000636850 FSTL1Q12841 308 aa26.1■■□□□ 1.77
CHRNA7-220ENST00000636850 SMC1BQ8NDV3 1235 aa26.1■■□□□ 1.77
CHRNA7-220ENST00000636850 SRCIN1Q9C0H9 1055 aa26.1■■□□□ 1.77
CHRNA7-220ENST00000636850 C6orf229H3BNL8 230 aa26.09■■□□□ 1.77
CHRNA7-220ENST00000636850 GRM8O00222 908 aa26.09■■□□□ 1.77
CHRNA7-220ENST00000636850 ALDH1L1O75891 902 aa26.09■■□□□ 1.77
CHRNA7-220ENST00000636850 FAM161AQ3B820 660 aa26.09■■□□□ 1.77
CHRNA7-220ENST00000636850 GJA3Q9Y6H8 435 aa26.09■■□□□ 1.77
CHRNA7-220ENST00000636850 A0A1B0GUL6 1792 aa26.09■■□□□ 1.77
CHRNA7-220ENST00000636850 CEP350Q5VT06 3117 aa26.09■■□□□ 1.77
CHRNA7-220ENST00000636850 ANKIB1Q9P2G1 1089 aa26.08■■□□□ 1.77
CHRNA7-220ENST00000636850 POLLQ9UGP5 575 aa26.08■■□□□ 1.77
CHRNA7-220ENST00000636850 ZNRF3Q9ULT6 936 aa26.08■■□□□ 1.77
CHRNA7-220ENST00000636850 WASHC4Q2M389 1173 aa26.07■■□□□ 1.76
CHRNA7-220ENST00000636850 TBC1D16Q8TBP0 767 aa26.07■■□□□ 1.76
CHRNA7-220ENST00000636850 PODXL2Q9NZ53 605 aa26.07■■□□□ 1.76
CHRNA7-220ENST00000636850 C9orf78Q9NZ63 289 aaPredicted RBP26.07■■□□□ 1.76
CHRNA7-220ENST00000636850 ADAMTSL1Q8N6G6 1762 aa26.06■■□□□ 1.76
CHRNA7-220ENST00000636850 UFL1O94874 794 aa26.06■■□□□ 1.76
CHRNA7-220ENST00000636850 EYA3Q99504 573 aa26.06■■□□□ 1.76
CHRNA7-220ENST00000636850 TAF1DQ9H5J8 278 aaPredicted RBP26.06■■□□□ 1.76
CHRNA7-220ENST00000636850 HACL1Q9UJ83 578 aa26.06■■□□□ 1.76
CHRNA7-220ENST00000636850 SCN9AQ15858 1988 aa26.06■■□□□ 1.76
CHRNA7-220ENST00000636850 PSME4Q14997 1843 aa26.05■■□□□ 1.76
CHRNA7-220ENST00000636850 CSF1RP07333 972 aa26.05■■□□□ 1.76
CHRNA7-220ENST00000636850 ITGA6P23229 1130 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms