RNA–Protein interactions for RNA: ENST00000636830.1

CLCN2-216, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 2

Gene CLCN2, Length 3,236 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-216ENST00000636830 RUFY3Q7L099 469 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
CLCN2-216ENST00000636830 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 LRP6O75581 1613 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 SLC27A2O14975 620 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 MBD3O95983 291 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 NCLP19338 710 aaKnown RBP11.14□□□□□ -0.63
CLCN2-216ENST00000636830 SMC3Q9UQE7 1217 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 JCADQ9P266 1359 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 AHDC1Q5TGY3 1603 aaPredicted RBP11.14□□□□□ -0.63
CLCN2-216ENST00000636830 EXOC5O00471 708 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 FOXD4L5Q5VV16 416 aaPredicted RBP11.14□□□□□ -0.63
CLCN2-216ENST00000636830 ATG9AQ7Z3C6 839 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 FOXD4L4Q8WXT5 416 aaPredicted RBP11.14□□□□□ -0.63
CLCN2-216ENST00000636830 NEUROD6Q96NK8 337 aa11.14□□□□□ -0.63
CLCN2-216ENST00000636830 COL22A1Q8NFW1 1626 aaPredicted RBP11.14□□□□□ -0.63
CLCN2-216ENST00000636830 ROBO1Q9Y6N7 1651 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 RPAP1Q9BWH6 1393 aaPredicted RBP11.13□□□□□ -0.63
CLCN2-216ENST00000636830 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
CLCN2-216ENST00000636830 ANKRD1Q15327 319 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 ADCK5Q3MIX3 580 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 KRT32Q14532 448 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 KBTBD3Q8NAB2 608 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 EDC3Q96F86 508 aaKnown RBP11.13□□□□□ -0.63
CLCN2-216ENST00000636830 BCL9O00512 1426 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 TAF5LO75529 589 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
CLCN2-216ENST00000636830 CEP126Q9P2H0 1117 aa11.13□□□□□ -0.63
CLCN2-216ENST00000636830 MAP3K15Q6ZN16 1313 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 ZNF609O15014 1411 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 CPA1P15085 419 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
CLCN2-216ENST00000636830 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
CLCN2-216ENST00000636830 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 ZNF445P59923 1031 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 TSGA10IPQ3SY00 556 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 MCMDC2Q4G0Z9 681 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
CLCN2-216ENST00000636830 ZNF589Q86UQ0 364 aaPredicted RBP11.12□□□□□ -0.63
CLCN2-216ENST00000636830 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
CLCN2-216ENST00000636830 PDIA4P13667 645 aaKnown RBP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 TAF7LQ5H9L4 462 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 ZBTB38Q8NAP3 1195 aaPredicted RBP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 DDX46Q7L014 1031 aaKnown RBP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 GAS2L3Q86XJ1 694 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 CCDC83Q8IWF9 413 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 PAG1Q9NWQ8 432 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 SPEF2Q9C093 1822 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 SH3TC1Q8TE82 1336 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 COL16A1Q07092 1604 aaPredicted RBP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 A0A1B0GUL7 405 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 STX6O43752 255 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 TIMM10P62072 90 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
CLCN2-216ENST00000636830 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
CLCN2-216ENST00000636830 CDHR2Q9BYE9 1310 aa11.1□□□□□ -0.63
CLCN2-216ENST00000636830 IFIT1P09914 478 aaKnown RBP11.1□□□□□ -0.63
CLCN2-216ENST00000636830 ZSCAN22P10073 491 aaPredicted RBP11.1□□□□□ -0.63
CLCN2-216ENST00000636830 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
CLCN2-216ENST00000636830 HELLSQ9NRZ9 838 aa11.1□□□□□ -0.63
CLCN2-216ENST00000636830 CCDC9Q9Y3X0 531 aaKnown RBP11.1□□□□□ -0.63
CLCN2-216ENST00000636830 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
CLCN2-216ENST00000636830 GOLIM4O00461 696 aa11.1□□□□□ -0.63
CLCN2-216ENST00000636830 RPS6KB1P23443 525 aa11.1□□□□□ -0.63
CLCN2-216ENST00000636830 IFIT5Q13325 482 aaKnown RBP11.1□□□□□ -0.63
CLCN2-216ENST00000636830 ZSCAN23Q3MJ62 389 aa11.1□□□□□ -0.63
CLCN2-216ENST00000636830 SYTL4Q96C24 671 aaPredicted RBP11.1□□□□□ -0.63
CLCN2-216ENST00000636830 LARGE1O95461 756 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 CYP19A1P11511 503 aaPredicted RBP11.09□□□□□ -0.63
CLCN2-216ENST00000636830 SYT1P21579 422 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 CCDC158Q5M9N0 1113 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 GORABQ5T7V8 394 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 GPT2Q8TD30 523 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 SYAP1Q96A49 352 aaPredicted RBP11.09□□□□□ -0.63
CLCN2-216ENST00000636830 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 CSF1RP07333 972 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 ANP32BQ92688 251 aaKnown RBP11.09□□□□□ -0.63
CLCN2-216ENST00000636830 FAM89AQ96GI7 184 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 ANKRD36CQ5JPF3 1778 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 GJB2P29033 226 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 ME3Q16798 604 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
CLCN2-216ENST00000636830 IL6STP40189 918 aaPredicted RBP11.08□□□□□ -0.64
CLCN2-216ENST00000636830 NLRP10Q86W26 655 aa11.08□□□□□ -0.64
CLCN2-216ENST00000636830 PUS3Q9BZE2 481 aaKnown RBP11.08□□□□□ -0.64
CLCN2-216ENST00000636830 TPCN1Q9ULQ1 816 aa11.08□□□□□ -0.64
CLCN2-216ENST00000636830 THRAP3Q9Y2W1 955 aaKnown RBP11.08□□□□□ -0.64
CLCN2-216ENST00000636830 TCHHQ07283 1943 aa11.08□□□□□ -0.64
CLCN2-216ENST00000636830 PDCP20941 246 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms