RNA–Protein interactions for RNA: ENST00000636803.1

AMT-238, Transcript of aminomethyltransferase, human

TSL 5

Gene AMT, Length 1,945 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-238	ENST00000636803	SH2B1	Q9NRF2	756 aa	Predicted RBP	20.78	■□□□□ 0.92
AMT-238	ENST00000636803	EYA2	O00167	538 aa		20.78	■□□□□ 0.92
AMT-238	ENST00000636803	HMG20B	Q9P0W2	317 aa		20.78	■□□□□ 0.92
AMT-238	ENST00000636803	ROBO1	Q9Y6N7	1651 aa		20.77	■□□□□ 0.92
AMT-238	ENST00000636803	CPA1	P15085	419 aa		20.77	■□□□□ 0.92
AMT-238	ENST00000636803	GAS2L3	Q86XJ1	694 aa		20.77	■□□□□ 0.92
AMT-238	ENST00000636803	EDC3	Q96F86	508 aa	Known RBP	20.77	■□□□□ 0.92
AMT-238	ENST00000636803	TAF5L	O75529	589 aa		20.76	■□□□□ 0.91
AMT-238	ENST00000636803	TSGA10IP	Q3SY00	556 aa		20.76	■□□□□ 0.91
AMT-238	ENST00000636803	FOXD4L5	Q5VV16	416 aa	Predicted RBP	20.76	■□□□□ 0.91
AMT-238	ENST00000636803	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	20.76	■□□□□ 0.91
AMT-238	ENST00000636803	COL16A1	Q07092	1604 aa	Predicted RBP	20.76	■□□□□ 0.91
AMT-238	ENST00000636803	BCL9	O00512	1426 aa		20.76	■□□□□ 0.91
AMT-238	ENST00000636803	ZNF445	P59923	1031 aa		20.76	■□□□□ 0.91
AMT-238	ENST00000636803	USPL1	Q5W0Q7	1092 aa		20.76	■□□□□ 0.91
AMT-238	ENST00000636803	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	20.76	■□□□□ 0.91
AMT-238	ENST00000636803	FBXO3	Q9UK99	471 aa		20.76	■□□□□ 0.91
AMT-238	ENST00000636803	PCCA	P05165	728 aa	Predicted RBP	20.75	■□□□□ 0.91
AMT-238	ENST00000636803	ZNF589	Q86UQ0	364 aa	Predicted RBP	20.75	■□□□□ 0.91
AMT-238	ENST00000636803	DNAJC2	Q99543	621 aa	Known RBP	20.75	■□□□□ 0.91
AMT-238	ENST00000636803	PLA2G12B	Q9BX93	195 aa		20.75	■□□□□ 0.91
AMT-238	ENST00000636803	ZNF609	O15014	1411 aa		20.75	■□□□□ 0.91
AMT-238	ENST00000636803	PANK2	Q9BZ23	570 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	SMC3	Q9UQE7	1217 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	WNK3	Q9BYP7	1800 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	MAP3K15	Q6ZN16	1313 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	MBD3	O95983	291 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	NCL	P19338	710 aa	Known RBP	20.74	■□□□□ 0.91
AMT-238	ENST00000636803	KBTBD3	Q8NAB2	608 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	GPT2	Q8TD30	523 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	NEUROD6	Q96NK8	337 aa		20.74	■□□□□ 0.91
AMT-238	ENST00000636803	PALLD	Q8WX93	1383 aa		20.73	■□□□□ 0.91
AMT-238	ENST00000636803	EXOC5	O00471	708 aa		20.73	■□□□□ 0.91
AMT-238	ENST00000636803	MCMDC2	Q4G0Z9	681 aa		20.73	■□□□□ 0.91
AMT-238	ENST00000636803	CAVIN1	Q6NZI2	390 aa	Known RBP	20.73	■□□□□ 0.91
AMT-238	ENST00000636803	LARGE1	O95461	756 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	ANKRD1	Q15327	319 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	CCDC57	Q2TAC2	916 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	LRRC24	Q50LG9	513 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	BLOC1S2	Q6QNY1	142 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	20.72	■□□□□ 0.91
AMT-238	ENST00000636803	ZNF594	Q96JF6	807 aa	Predicted RBP	20.72	■□□□□ 0.91
AMT-238	ENST00000636803	LARP6	Q9BRS8	491 aa	Known RBP	20.72	■□□□□ 0.91
AMT-238	ENST00000636803	ZNF330	Q9Y3S2	320 aa	Predicted RBP	20.72	■□□□□ 0.91
AMT-238	ENST00000636803	SPEF2	Q9C093	1822 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	KRT32	Q14532	448 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	ZSCAN23	Q3MJ62	389 aa		20.72	■□□□□ 0.91
AMT-238	ENST00000636803	GIGYF2	Q6Y7W6	1299 aa	Known RBP	20.72	■□□□□ 0.91
AMT-238	ENST00000636803	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	20.72	■□□□□ 0.91
AMT-238	ENST00000636803		U3KPZ7	1027 aa	Predicted RBP	20.72	■□□□□ 0.91
AMT-238	ENST00000636803	SH3TC1	Q8TE82	1336 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	CYP19A1	P11511	503 aa	Predicted RBP	20.71	■□□□□ 0.91
AMT-238	ENST00000636803	TIMM10	P62072	90 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	HSP90AB3P	Q58FF7	597 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	DDX46	Q7L014	1031 aa	Known RBP	20.71	■□□□□ 0.91
AMT-238	ENST00000636803	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	20.71	■□□□□ 0.91
AMT-238	ENST00000636803	CHAMP1	Q96JM3	812 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	PAG1	Q9NWQ8	432 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	CEP126	Q9P2H0	1117 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	NDUFB9	Q9Y6M9	179 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	CDHR2	Q9BYE9	1310 aa		20.71	■□□□□ 0.91
AMT-238	ENST00000636803	CSF1R	P07333	972 aa		20.7	■□□□□ 0.91
AMT-238	ENST00000636803	ZSCAN22	P10073	491 aa	Predicted RBP	20.7	■□□□□ 0.91
AMT-238	ENST00000636803	RPS6KB1	P23443	525 aa		20.7	■□□□□ 0.91
AMT-238	ENST00000636803	STX6	O43752	255 aa		20.7	■□□□□ 0.9
AMT-238	ENST00000636803	CCDC83	Q8IWF9	413 aa		20.7	■□□□□ 0.9
AMT-238	ENST00000636803	HELLS	Q9NRZ9	838 aa		20.7	■□□□□ 0.9
AMT-238	ENST00000636803		A0A1B0GUL7	405 aa		20.69	■□□□□ 0.9
AMT-238	ENST00000636803	SYT1	P21579	422 aa		20.69	■□□□□ 0.9
AMT-238	ENST00000636803	ME3	Q16798	604 aa		20.69	■□□□□ 0.9
AMT-238	ENST00000636803	FAM43A	Q8N2R8	423 aa		20.69	■□□□□ 0.9
AMT-238	ENST00000636803	CDCA7	Q9BWT1	371 aa	Predicted RBP	20.69	■□□□□ 0.9
AMT-238	ENST00000636803	PUS3	Q9BZE2	481 aa	Known RBP	20.69	■□□□□ 0.9
AMT-238	ENST00000636803	AKAP2	Q9Y2D5	859 aa		20.69	■□□□□ 0.9
AMT-238	ENST00000636803	ANKRD36C	Q5JPF3	1778 aa		20.69	■□□□□ 0.9
AMT-238	ENST00000636803	SLC4A9	Q96Q91	983 aa		20.68	■□□□□ 0.9
AMT-238	ENST00000636803	TPCN1	Q9ULQ1	816 aa		20.68	■□□□□ 0.9
AMT-238	ENST00000636803	GOLIM4	O00461	696 aa		20.68	■□□□□ 0.9
AMT-238	ENST00000636803	PDIA4	P13667	645 aa	Known RBP	20.68	■□□□□ 0.9
AMT-238	ENST00000636803	FAM89A	Q96GI7	184 aa		20.68	■□□□□ 0.9
AMT-238	ENST00000636803	IFIT1	P09914	478 aa	Known RBP	20.67	■□□□□ 0.9
AMT-238	ENST00000636803	GJB2	P29033	226 aa		20.67	■□□□□ 0.9
AMT-238	ENST00000636803	NLRP10	Q86W26	655 aa		20.67	■□□□□ 0.9
AMT-238	ENST00000636803	TMEM87A	Q8NBN3	555 aa		20.67	■□□□□ 0.9
AMT-238	ENST00000636803	CCDC9	Q9Y3X0	531 aa	Known RBP	20.67	■□□□□ 0.9
AMT-238	ENST00000636803	ATP6V1D	Q9Y5K8	247 aa		20.67	■□□□□ 0.9
AMT-238	ENST00000636803	ST3GAL1	Q11201	340 aa		20.66	■□□□□ 0.9
AMT-238	ENST00000636803	IFIT5	Q13325	482 aa	Known RBP	20.66	■□□□□ 0.9
AMT-238	ENST00000636803	SEC62	Q99442	399 aa	Known RBP	20.66	■□□□□ 0.9
AMT-238	ENST00000636803	TAF6L	Q9Y6J9	622 aa		20.66	■□□□□ 0.9
AMT-238	ENST00000636803	HLF	Q16534	295 aa		20.66	■□□□□ 0.9
AMT-238	ENST00000636803	ZMYM1	Q5SVZ6	1142 aa		20.66	■□□□□ 0.9
AMT-238	ENST00000636803	CCDC129	Q6ZRS4	1044 aa		20.66	■□□□□ 0.9
AMT-238	ENST00000636803	RTN4	Q9NQC3	1192 aa	Known RBP	20.66	■□□□□ 0.9
AMT-238	ENST00000636803	F13A1	P00488	732 aa		20.65	■□□□□ 0.9
AMT-238	ENST00000636803	TAF7L	Q5H9L4	462 aa		20.65	■□□□□ 0.9
AMT-238	ENST00000636803	RBM27	Q9P2N5	1060 aa	Known RBP	20.65	■□□□□ 0.9
AMT-238	ENST00000636803	DOT1L	Q8TEK3	1739 aa		20.65	■□□□□ 0.9
AMT-238	ENST00000636803	ERVV-1	B6SEH8	477 aa		20.65	■□□□□ 0.9
AMT-238	ENST00000636803	TOB2	Q14106	344 aa	Predicted RBP	20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms