RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 DNAJC10Q8IXB1 793 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 IL17RAQ96F46 866 aa22.65■■□□□ 1.22
CLN5-216ENST00000636780 PCDH11XQ9BZA7 1347 aa22.64■■□□□ 1.22
CLN5-216ENST00000636780 PCDH11YQ9BZA8 1340 aa22.64■■□□□ 1.22
CLN5-216ENST00000636780 STX6O43752 255 aa22.64■■□□□ 1.21
CLN5-216ENST00000636780 GPTP24298 496 aa22.64■■□□□ 1.21
CLN5-216ENST00000636780 RABL6Q3YEC7 729 aaPredicted RBP22.64■■□□□ 1.21
CLN5-216ENST00000636780 ZKSCAN1P17029 563 aaPredicted RBP22.64■■□□□ 1.21
CLN5-216ENST00000636780 TCHHQ07283 1943 aa22.64■■□□□ 1.21
CLN5-216ENST00000636780 HSP90AB3PQ58FF7 597 aa22.63■■□□□ 1.21
CLN5-216ENST00000636780 BTG4Q9NY30 223 aa22.63■■□□□ 1.21
CLN5-216ENST00000636780 TAF5LO75529 589 aa22.63■■□□□ 1.21
CLN5-216ENST00000636780 CWC25Q9NXE8 425 aaPredicted RBP22.63■■□□□ 1.21
CLN5-216ENST00000636780 H7C1W4 665 aa22.62■■□□□ 1.21
CLN5-216ENST00000636780 ZNF445P59923 1031 aa22.62■■□□□ 1.21
CLN5-216ENST00000636780 DNM1Q05193 864 aaKnown RBP22.62■■□□□ 1.21
CLN5-216ENST00000636780 CPDO75976 1380 aa22.62■■□□□ 1.21
CLN5-216ENST00000636780 ZSCAN22P10073 491 aaPredicted RBP22.62■■□□□ 1.21
CLN5-216ENST00000636780 FOSBP53539 338 aa22.62■■□□□ 1.21
CLN5-216ENST00000636780 KDM4FA0A1W2PPD8 638 aa22.61■■□□□ 1.21
CLN5-216ENST00000636780 PIGBQ92521 554 aa22.61■■□□□ 1.21
CLN5-216ENST00000636780 TRIM44Q96DX7 344 aaPredicted RBP22.61■■□□□ 1.21
CLN5-216ENST00000636780 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
CLN5-216ENST00000636780 WDR33Q9C0J8 1336 aaKnown RBP22.61■■□□□ 1.21
CLN5-216ENST00000636780 CRYBG1Q9Y4K1 1723 aa22.61■■□□□ 1.21
CLN5-216ENST00000636780 SOS2Q07890 1332 aaPredicted RBP22.61■■□□□ 1.21
CLN5-216ENST00000636780 ATP5JP18859 108 aa22.6■■□□□ 1.21
CLN5-216ENST00000636780 COL5A2P05997 1499 aaPredicted RBP22.6■■□□□ 1.21
CLN5-216ENST00000636780 CHST3Q7LGC8 479 aa22.6■■□□□ 1.21
CLN5-216ENST00000636780 PI16Q6UXB8 463 aa22.59■■□□□ 1.21
CLN5-216ENST00000636780 ZNF609O15014 1411 aa22.59■■□□□ 1.21
CLN5-216ENST00000636780 DCCP43146 1447 aa22.59■■□□□ 1.21
CLN5-216ENST00000636780 ADORA1P30542 326 aa22.59■■□□□ 1.21
CLN5-216ENST00000636780 HLFQ16534 295 aa22.59■■□□□ 1.21
CLN5-216ENST00000636780 TMOD3Q9NYL9 352 aa22.59■■□□□ 1.21
CLN5-216ENST00000636780 TOB2Q14106 344 aaPredicted RBP22.58■■□□□ 1.21
CLN5-216ENST00000636780 BLOC1S2Q6QNY1 142 aa22.58■■□□□ 1.21
CLN5-216ENST00000636780 CARD10Q9BWT7 1032 aa22.58■■□□□ 1.2
CLN5-216ENST00000636780 ESPNB1AK53 854 aa22.57■■□□□ 1.2
CLN5-216ENST00000636780 JAK2O60674 1132 aa22.57■■□□□ 1.2
CLN5-216ENST00000636780 F13A1P00488 732 aa22.57■■□□□ 1.2
CLN5-216ENST00000636780 FKBP4Q02790 459 aaKnown RBP eCLIP22.57■■□□□ 1.2
CLN5-216ENST00000636780 DDX11Q96FC9 970 aa22.57■■□□□ 1.2
CLN5-216ENST00000636780 MTMR6Q9Y217 621 aa22.57■■□□□ 1.2
CLN5-216ENST00000636780 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.57■■□□□ 1.2
CLN5-216ENST00000636780 ERVV-2B6SEH9 535 aa22.57■■□□□ 1.2
CLN5-216ENST00000636780 CDC37L1Q7L3B6 337 aa22.57■■□□□ 1.2
CLN5-216ENST00000636780 FAM177BA6PVY3 158 aa22.56■■□□□ 1.2
CLN5-216ENST00000636780 CYP21A2P08686 494 aa22.56■■□□□ 1.2
CLN5-216ENST00000636780 MED23Q9ULK4 1368 aa22.56■■□□□ 1.2
CLN5-216ENST00000636780 LRSAM1Q6UWE0 723 aa22.56■■□□□ 1.2
CLN5-216ENST00000636780 AFDNP55196 1824 aaKnown RBP22.56■■□□□ 1.2
CLN5-216ENST00000636780 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
CLN5-216ENST00000636780 A0A1B0GUL7 405 aa22.55■■□□□ 1.2
CLN5-216ENST00000636780 TTLL5Q6EMB2 1281 aa22.55■■□□□ 1.2
CLN5-216ENST00000636780 KCNB2Q92953 911 aa22.55■■□□□ 1.2
CLN5-216ENST00000636780 SLC4A9Q96Q91 983 aa22.55■■□□□ 1.2
CLN5-216ENST00000636780 TFIP11Q9UBB9 837 aaKnown RBP22.55■■□□□ 1.2
CLN5-216ENST00000636780 STOX1Q6ZVD7 989 aa22.55■■□□□ 1.2
CLN5-216ENST00000636780 HAUS7Q99871 368 aa22.55■■□□□ 1.2
CLN5-216ENST00000636780 MRC1P22897 1456 aa22.55■■□□□ 1.2
CLN5-216ENST00000636780 EPB41L2O43491 1005 aaKnown RBP22.54■■□□□ 1.2
CLN5-216ENST00000636780 RPS6KB1P23443 525 aa22.54■■□□□ 1.2
CLN5-216ENST00000636780 SCARF1Q14162 830 aa22.54■■□□□ 1.2
CLN5-216ENST00000636780 LARP1BQ659C4 914 aaKnown RBP22.54■■□□□ 1.2
CLN5-216ENST00000636780 GLI3P10071 1580 aa22.54■■□□□ 1.2
CLN5-216ENST00000636780 ATG3Q9NT62 314 aa22.54■■□□□ 1.2
CLN5-216ENST00000636780 TAOK2Q9UL54 1235 aa22.54■■□□□ 1.2
CLN5-216ENST00000636780 ISY1Q9ULR0 285 aaKnown RBP22.54■■□□□ 1.2
CLN5-216ENST00000636780 ARFGEF2Q9Y6D5 1785 aa22.53■■□□□ 1.2
CLN5-216ENST00000636780 HIP1O00291 1037 aa22.53■■□□□ 1.2
CLN5-216ENST00000636780 NAP1L2Q9ULW6 460 aaPredicted RBP22.53■■□□□ 1.2
CLN5-216ENST00000636780 TM6SF1Q9BZW5 370 aa22.53■■□□□ 1.2
CLN5-216ENST00000636780 PAG1Q9NWQ8 432 aa22.53■■□□□ 1.2
CLN5-216ENST00000636780 TBC1D2BQ9UPU7 963 aa22.53■■□□□ 1.2
CLN5-216ENST00000636780 SNAP23O00161 211 aa22.52■■□□□ 1.2
CLN5-216ENST00000636780 Q6ZUG5 572 aa22.52■■□□□ 1.2
CLN5-216ENST00000636780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.52■■□□□ 1.2
CLN5-216ENST00000636780 EYA2O00167 538 aa22.52■■□□□ 1.2
CLN5-216ENST00000636780 NKX1-1Q15270 411 aaPredicted RBP22.51■■□□□ 1.19
CLN5-216ENST00000636780 MCMDC2Q4G0Z9 681 aa22.51■■□□□ 1.19
CLN5-216ENST00000636780 GPHNQ9NQX3 736 aaPredicted RBP22.51■■□□□ 1.19
CLN5-216ENST00000636780 IFIT1P09914 478 aaKnown RBP22.51■■□□□ 1.19
CLN5-216ENST00000636780 GIMAP6Q6P9H5 292 aa22.51■■□□□ 1.19
CLN5-216ENST00000636780 HSP90B1P14625 803 aaKnown RBP22.5■■□□□ 1.19
CLN5-216ENST00000636780 HAND2P61296 217 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 RAB11FIP4Q86YS3 637 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 KBTBD3Q8NAB2 608 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 CCDC191Q8NCU4 936 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 BRF1Q92994 677 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 NEK1Q96PY6 1258 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 KCPQ6ZWJ8 1503 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 MBD3O95983 291 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 TCIRG1Q13488 830 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 RNF20Q5VTR2 975 aa22.5■■□□□ 1.19
CLN5-216ENST00000636780 PKD1L3Q7Z443 1732 aa22.49■■□□□ 1.19
CLN5-216ENST00000636780 PSMA5P28066 241 aa22.49■■□□□ 1.19
CLN5-216ENST00000636780 CCDC57Q2TAC2 916 aa22.49■■□□□ 1.19
CLN5-216ENST00000636780 CCT2P78371 535 aaKnown RBP22.49■■□□□ 1.19
CLN5-216ENST00000636780 CCDC173Q0VFZ6 552 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms