RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 RABL6Q3YEC7 729 aaPredicted RBP13.32□□□□□ -0.28
CLN5-213ENST00000636681 TPTE2Q6XPS3 522 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 SEC31BQ9NQW1 1179 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
CLN5-213ENST00000636681 NPHP1O15259 732 aa13.31□□□□□ -0.28
CLN5-213ENST00000636681 RFX5P48382 616 aaPredicted RBP13.31□□□□□ -0.28
CLN5-213ENST00000636681 CTSWP56202 376 aa13.31□□□□□ -0.28
CLN5-213ENST00000636681 POLA2Q14181 598 aa13.31□□□□□ -0.28
CLN5-213ENST00000636681 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
CLN5-213ENST00000636681 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
CLN5-213ENST00000636681 EXOC6BQ9Y2D4 811 aa13.31□□□□□ -0.28
CLN5-213ENST00000636681 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.31□□□□□ -0.28
CLN5-213ENST00000636681 CSF1RP07333 972 aa13.3□□□□□ -0.28
CLN5-213ENST00000636681 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
CLN5-213ENST00000636681 SSH3Q8TE77 659 aa13.3□□□□□ -0.28
CLN5-213ENST00000636681 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
CLN5-213ENST00000636681 SIL1Q9H173 461 aa13.3□□□□□ -0.28
CLN5-213ENST00000636681 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
CLN5-213ENST00000636681 MTX1Q13505 466 aa13.3□□□□□ -0.28
CLN5-213ENST00000636681 SLC10A5Q5PT55 438 aa13.3□□□□□ -0.28
CLN5-213ENST00000636681 PUS3Q9BZE2 481 aaKnown RBP13.3□□□□□ -0.28
CLN5-213ENST00000636681 PTPN12Q05209 780 aaKnown RBP13.29□□□□□ -0.28
CLN5-213ENST00000636681 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
CLN5-213ENST00000636681 AAMPQ13685 434 aa13.29□□□□□ -0.28
CLN5-213ENST00000636681 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
CLN5-213ENST00000636681 SMARCA5O60264 1052 aaPredicted RBP13.28□□□□□ -0.28
CLN5-213ENST00000636681 ITGA6P23229 1130 aa13.27□□□□□ -0.28
CLN5-213ENST00000636681 LRRC24Q50LG9 513 aa13.27□□□□□ -0.28
CLN5-213ENST00000636681 SLC16A10Q8TF71 515 aa13.27□□□□□ -0.28
CLN5-213ENST00000636681 RWDD1Q9H446 243 aaPredicted RBP13.27□□□□□ -0.28
CLN5-213ENST00000636681 KIF13BQ9NQT8 1826 aa13.27□□□□□ -0.29
CLN5-213ENST00000636681 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.29
CLN5-213ENST00000636681 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.29
CLN5-213ENST00000636681 CELF1Q92879 486 aaKnown RBP13.27□□□□□ -0.29
CLN5-213ENST00000636681 CHRNA5P30532 468 aa13.26□□□□□ -0.29
CLN5-213ENST00000636681 PTGER2P43116 358 aa13.26□□□□□ -0.29
CLN5-213ENST00000636681 ST5P78524 1137 aa13.26□□□□□ -0.29
CLN5-213ENST00000636681 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
CLN5-213ENST00000636681 SGIP1Q9BQI5 828 aa13.26□□□□□ -0.29
CLN5-213ENST00000636681 MTFR1LQ9H019 292 aa13.26□□□□□ -0.29
CLN5-213ENST00000636681 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
CLN5-213ENST00000636681 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
CLN5-213ENST00000636681 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
CLN5-213ENST00000636681 SMC5Q8IY18 1101 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 SLX4Q8IY92 1834 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 HMMRO75330 724 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 SASH1O94885 1247 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
CLN5-213ENST00000636681 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
CLN5-213ENST00000636681 IL1RAPL2Q9NP60 686 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
CLN5-213ENST00000636681 LRP5O75197 1615 aa13.24□□□□□ -0.29
CLN5-213ENST00000636681 SNAP23O00161 211 aa13.24□□□□□ -0.29
CLN5-213ENST00000636681 SOCS7O14512 581 aa13.24□□□□□ -0.29
CLN5-213ENST00000636681 OTUD7AQ8TE49 926 aaPredicted RBP13.24□□□□□ -0.29
CLN5-213ENST00000636681 COPRSQ9NQ92 184 aa13.24□□□□□ -0.29
CLN5-213ENST00000636681 HDAC5Q9UQL6 1122 aa13.24□□□□□ -0.29
CLN5-213ENST00000636681 C10orf71Q711Q0 1435 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 ANKRD18BA2A2Z9 1011 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 OLFM4Q6UX06 510 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 CENPQQ7L2Z9 268 aaPredicted RBP13.23□□□□□ -0.29
CLN5-213ENST00000636681 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
CLN5-213ENST00000636681 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 NOP58Q9Y2X3 529 aaKnown RBP13.23□□□□□ -0.29
CLN5-213ENST00000636681 DLEC1Q9Y238 1755 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
CLN5-213ENST00000636681 PDE4AP27815 886 aa13.22□□□□□ -0.29
CLN5-213ENST00000636681 CRY2Q49AN0 593 aa13.22□□□□□ -0.29
CLN5-213ENST00000636681 PPP1R1BQ9UD71 204 aaPredicted RBP13.22□□□□□ -0.29
CLN5-213ENST00000636681 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
CLN5-213ENST00000636681 KLRG2A4D1S0 409 aaPredicted RBP13.22□□□□□ -0.29
CLN5-213ENST00000636681 TFCP2Q12800 502 aa13.22□□□□□ -0.29
CLN5-213ENST00000636681 OS9Q13438 667 aaPredicted RBP13.22□□□□□ -0.29
CLN5-213ENST00000636681 TAF7LQ5H9L4 462 aa13.22□□□□□ -0.29
CLN5-213ENST00000636681 C2CD5Q86YS7 1000 aa13.22□□□□□ -0.29
CLN5-213ENST00000636681 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
CLN5-213ENST00000636681 BRCA1P38398 1863 aaKnown RBP13.21□□□□□ -0.29
CLN5-213ENST00000636681 EYA2O00167 538 aa13.21□□□□□ -0.29
CLN5-213ENST00000636681 SRGNP10124 158 aa13.21□□□□□ -0.29
CLN5-213ENST00000636681 LDHAL6AQ6ZMR3 332 aa13.21□□□□□ -0.29
CLN5-213ENST00000636681 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
CLN5-213ENST00000636681 UTRNP46939 3433 aa13.21□□□□□ -0.3
CLN5-213ENST00000636681 TAF5LO75529 589 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 POLD1P28340 1107 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 NUCB1Q02818 461 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLN5-213ENST00000636681 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
CLN5-213ENST00000636681 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 GCC1Q96CN9 775 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
CLN5-213ENST00000636681 RIPOR2Q9Y4F9 1068 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 DPEP1P16444 411 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms