RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 CCDC30Q5VVM6 783 aa20.84■□□□□ 0.93
CACNA1A-229ENST00000636670 TTLL7Q6ZT98 887 aa20.84■□□□□ 0.93
CACNA1A-229ENST00000636670 TSPYL6Q8N831 410 aa20.84■□□□□ 0.93
CACNA1A-229ENST00000636670 JDP2Q8WYK2 163 aa20.84■□□□□ 0.93
CACNA1A-229ENST00000636670 IBTKQ9P2D0 1353 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-229ENST00000636670 TRPM7Q96QT4 1865 aa20.84■□□□□ 0.93
CACNA1A-229ENST00000636670 TRAF5O00463 557 aa20.83■□□□□ 0.93
CACNA1A-229ENST00000636670 USP50Q70EL3 339 aaPredicted RBP20.83■□□□□ 0.93
CACNA1A-229ENST00000636670 SYNE4Q8N205 404 aa20.83■□□□□ 0.93
CACNA1A-229ENST00000636670 HYPKQ9NX55 129 aa20.83■□□□□ 0.93
CACNA1A-229ENST00000636670 EIF6P56537 245 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-229ENST00000636670 GJA3Q9Y6H8 435 aa20.82■□□□□ 0.92
CACNA1A-229ENST00000636670 EXOSC9Q06265 439 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-229ENST00000636670 XAGE3Q8WTP9 111 aa20.81■□□□□ 0.92
CACNA1A-229ENST00000636670 ZBTB3Q9H5J0 574 aa20.81■□□□□ 0.92
CACNA1A-229ENST00000636670 EPS15P42566 896 aa20.8■□□□□ 0.92
CACNA1A-229ENST00000636670 HLFQ16534 295 aa20.8■□□□□ 0.92
CACNA1A-229ENST00000636670 CIAPIN1Q6FI81 312 aa20.8■□□□□ 0.92
CACNA1A-229ENST00000636670 OLFM4Q6UX06 510 aa20.8■□□□□ 0.92
CACNA1A-229ENST00000636670 GIGYF2Q6Y7W6 1299 aaKnown RBP20.8■□□□□ 0.92
CACNA1A-229ENST00000636670 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
CACNA1A-229ENST00000636670 KLRG2A4D1S0 409 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-229ENST00000636670 SCNN1DP51172 638 aa20.79■□□□□ 0.92
CACNA1A-229ENST00000636670 STK31Q9BXU1 1019 aa20.79■□□□□ 0.92
CACNA1A-229ENST00000636670 CELF2O95319 508 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 ALDH1B1P30837 517 aa20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 SLFN5Q08AF3 891 aa20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 HSP90AB3PQ58FF7 597 aa20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 PSMD1Q99460 953 aa20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 DDX60Q8IY21 1712 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
CACNA1A-229ENST00000636670 HNRNPUQ00839 825 aaKnown RBP eCLIP20.77■□□□□ 0.92
CACNA1A-229ENST00000636670 AIMP1Q12904 312 aaKnown RBP20.77■□□□□ 0.92
CACNA1A-229ENST00000636670 NBPF5PQ86XG9 351 aaPredicted RBP20.77■□□□□ 0.92
CACNA1A-229ENST00000636670 VAMP4O75379 141 aa20.76■□□□□ 0.91
CACNA1A-229ENST00000636670 NOGQ13253 232 aa20.76■□□□□ 0.91
CACNA1A-229ENST00000636670 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
CACNA1A-229ENST00000636670 GCC1Q96CN9 775 aa20.76■□□□□ 0.91
CACNA1A-229ENST00000636670 UBN2Q6ZU65 1347 aa20.76■□□□□ 0.91
CACNA1A-229ENST00000636670 PARP10Q53GL7 1025 aa20.74■□□□□ 0.91
CACNA1A-229ENST00000636670 ZNF34Q8IZ26 560 aa20.74■□□□□ 0.91
CACNA1A-229ENST00000636670 TRMT2AQ8IZ69 625 aaKnown RBP20.74■□□□□ 0.91
CACNA1A-229ENST00000636670 PHAXQ9H814 394 aaKnown RBP20.74■□□□□ 0.91
CACNA1A-229ENST00000636670 MYH3P11055 1940 aa20.74■□□□□ 0.91
CACNA1A-229ENST00000636670 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
CACNA1A-229ENST00000636670 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
CACNA1A-229ENST00000636670 TPTE2Q6XPS3 522 aa20.73■□□□□ 0.91
CACNA1A-229ENST00000636670 ANKRD13DQ6ZTN6 518 aa20.73■□□□□ 0.91
CACNA1A-229ENST00000636670 CDCA7LQ96GN5 454 aa20.73■□□□□ 0.91
CACNA1A-229ENST00000636670 NYXQ9GZU5 481 aa20.73■□□□□ 0.91
CACNA1A-229ENST00000636670 CC2D2BQ6DHV5 1058 aa20.72■□□□□ 0.91
CACNA1A-229ENST00000636670 ADARB2Q9NS39 739 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-229ENST00000636670 GPTP24298 496 aa20.71■□□□□ 0.91
CACNA1A-229ENST00000636670 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
CACNA1A-229ENST00000636670 SAGE1Q9NXZ1 904 aa20.71■□□□□ 0.91
CACNA1A-229ENST00000636670 ABCC12Q96J65 1359 aa20.71■□□□□ 0.91
CACNA1A-229ENST00000636670 NTSR2O95665 410 aa20.7■□□□□ 0.9
CACNA1A-229ENST00000636670 TCIRG1Q13488 830 aa20.7■□□□□ 0.9
CACNA1A-229ENST00000636670 LARGE2Q8N3Y3 721 aa20.7■□□□□ 0.9
CACNA1A-229ENST00000636670 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
CACNA1A-229ENST00000636670 SNED1Q8TER0 1413 aa20.7■□□□□ 0.9
CACNA1A-229ENST00000636670 TCERG1O14776 1098 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-229ENST00000636670 SLC4A2P04920 1241 aa20.69■□□□□ 0.9
CACNA1A-229ENST00000636670 CT47B1P0C2W7 299 aaPredicted RBP20.69■□□□□ 0.9
CACNA1A-229ENST00000636670 FLIIQ13045 1269 aa20.69■□□□□ 0.9
CACNA1A-229ENST00000636670 PPP1R42Q7Z4L9 355 aa20.69■□□□□ 0.9
CACNA1A-229ENST00000636670 RIC3Q7Z5B4 369 aa20.69■□□□□ 0.9
CACNA1A-229ENST00000636670 GLIS2Q9BZE0 524 aaPredicted RBP20.69■□□□□ 0.9
CACNA1A-229ENST00000636670 COL4A5P29400 1685 aa20.68■□□□□ 0.9
CACNA1A-229ENST00000636670 GRIPAP1Q4V328 841 aa20.68■□□□□ 0.9
CACNA1A-229ENST00000636670 NLRP10Q86W26 655 aa20.68■□□□□ 0.9
CACNA1A-229ENST00000636670 ISCA1Q9BUE6 129 aa20.68■□□□□ 0.9
CACNA1A-229ENST00000636670 ZNF408Q9H9D4 720 aa20.68■□□□□ 0.9
CACNA1A-229ENST00000636670 GPRC5DQ9NZD1 345 aa20.68■□□□□ 0.9
CACNA1A-229ENST00000636670 PGAP2Q9UHJ9 254 aa20.68■□□□□ 0.9
CACNA1A-229ENST00000636670 SUSD4Q5VX71 490 aa20.67■□□□□ 0.9
CACNA1A-229ENST00000636670 FAM177BA6PVY3 158 aa20.66■□□□□ 0.9
CACNA1A-229ENST00000636670 KSR2Q6VAB6 950 aa20.66■□□□□ 0.9
CACNA1A-229ENST00000636670 G2E3Q7L622 706 aa20.66■□□□□ 0.9
CACNA1A-229ENST00000636670 CTU1Q7Z7A3 348 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-229ENST00000636670 ZC3H15Q8WU90 426 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-229ENST00000636670 GTF2E1P29083 439 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-229ENST00000636670 TRIM28Q13263 835 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-229ENST00000636670 CDC37L1Q7L3B6 337 aa20.65■□□□□ 0.9
CACNA1A-229ENST00000636670 METTL22Q9BUU2 404 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-229ENST00000636670 UTP14AQ9BVJ6 771 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-229ENST00000636670 PI4KAP2A4QPH2 592 aa20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 HUNKP57058 714 aa20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 FKBP5Q13451 457 aaPredicted RBP20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 NIM1KQ8IY84 436 aa20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 PI4KAP1Q8N8J0 262 aa20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 MAP3K2Q9Y2U5 619 aa20.64■□□□□ 0.89
CACNA1A-229ENST00000636670 HABP4Q5JVS0 413 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-229ENST00000636670 MYD88Q99836 296 aa20.63■□□□□ 0.89
CACNA1A-229ENST00000636670 RNF186Q9NXI6 227 aa20.63■□□□□ 0.89
CACNA1A-229ENST00000636670 SH3TC1Q8TE82 1336 aa20.62■□□□□ 0.89
CACNA1A-229ENST00000636670 TRPA1O75762 1119 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms