RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 MBIPQ9NS73 344 aa2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 TSPYL4Q9UJ04 414 aa2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 NUDCQ9Y266 331 aa2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 ZBTB12Q9Y330 459 aaPredicted RBP2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 DOCK1Q14185 1865 aa2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 GBF1Q92538 1859 aa2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 PLXNA1Q9UIW2 1896 aa2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 AOX1Q06278 1338 aa2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 KIAA0100Q14667 2235 aaKnown RBP2.13□□□□□ -2.07
SYNGAP1-216ENST00000636640 CNTNAP1P78357 1384 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 RTL9Q8NET4 1388 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 CENPFP49454 3210 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 NAV1Q8NEY1 1877 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 ERVV-1B6SEH8 477 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 SNAP23O00161 211 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 PPEF1O14829 653 aaPredicted RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 NPHP1O15259 732 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 IGKV5-2P06315 115 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 ZNF853P0CG23 659 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 HSPA8P11142 646 aaKnown RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 HMGB2P26583 209 aaKnown RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 KLRK1P26718 216 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 EPHX2P34913 555 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 GMPSP49915 693 aaPredicted RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 LBX1P52954 281 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 GPSM2P81274 684 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 GRM1Q13255 1194 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 TCIRG1Q13488 830 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 DOK7Q18PE1 504 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 SLC10A5Q5PT55 438 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 DUSP27Q5VZP5 1158 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 CYP4F22Q6NT55 531 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 DPY19L2Q6NUT2 758 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 TPTE2Q6XPS3 522 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 MOB2Q70IA6 237 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 SAMD7Q7Z3H4 446 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 TXNRD3Q86VQ6 643 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 TNS4Q8IZW8 715 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 CNTROBQ8N137 903 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 FAM89AQ96GI7 184 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 L3MBTL3Q96JM7 780 aaPredicted RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 CRAMP1Q96RY5 1269 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 ISCA1Q9BUE6 129 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 GLIS2Q9BZE0 524 aaPredicted RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 PRKRIP1Q9H875 184 aaPredicted RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 DBNDD1Q9H9R9 158 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 SPINK5Q9NQ38 1064 aaPredicted RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 DDX21Q9NR30 783 aaKnown RBP eCLIP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 POLLQ9UGP5 575 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 HACL1Q9UJ83 578 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 FZD1Q9UP38 647 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 CLEC11AQ9Y240 323 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 SALL2Q9Y467 1007 aaPredicted RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 PCDHAC2Q9Y5I4 1007 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 MYH6P13533 1939 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 MYH4Q9Y623 1939 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 HTTP42858 3142 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 MYBBP1AQ9BQG0 1328 aaKnown RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 MAPK8IP3Q9UPT6 1336 aa2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 ZC3H4Q9UPT8 1303 aaKnown RBP2.12□□□□□ -2.07
SYNGAP1-216ENST00000636640 IBTKQ9P2D0 1353 aaPredicted RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 RLFQ13129 1914 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 CEP290O15078 2479 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 RASSF10A6NK89 507 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 TMEM88BA6NKF7 163 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 ADM5C9JUS6 153 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 PSMD14O00487 310 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 PPIP5K2O43314 1243 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 GTF2E1P29083 439 aaPredicted RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 ALDH1B1P30837 517 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 CWF19L2Q2TBE0 894 aaKnown RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 DEFB115Q30KQ5 88 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 TBC1D10BQ4KMP7 808 aaPredicted RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 EPHA10Q5JZY3 1008 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 RBM26Q5T8P6 1007 aaKnown RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 PRAMEF18Q5VWM3 479 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 KIF6Q6ZMV9 814 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 ANKRD13DQ6ZTN6 518 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 USP48Q86UV5 1035 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 LDHDQ86WU2 507 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 SP8Q8IXZ3 490 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 GPC2Q8N158 579 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 LARGE2Q8N3Y3 721 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 MPNDQ8N594 471 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 PLBD2Q8NHP8 589 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 TBC1D16Q8TBP0 767 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 PNISRQ8TF01 805 aaKnown RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 RPGRQ92834 1020 aaKnown RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 RUNDC1Q96C34 613 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 RBM17Q96I25 401 aaKnown RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 CAPNS2Q96L46 248 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 NLRP3Q96P20 1036 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 PSMD1Q99460 953 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 MYD88Q99836 296 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 UTP14AQ9BVJ6 771 aaKnown RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 RTFDC1Q9BY42 306 aaPredicted RBP2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 NYXQ9GZU5 481 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 R3HDMLQ9H3Y0 253 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 CREBZFQ9NS37 354 aa2.11□□□□□ -2.07
SYNGAP1-216ENST00000636640 WBP1LQ9NX94 342 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms