RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 CCDC24Q8N4L8 307 aa18.91■□□□□ 0.62
CHRNA7-217ENST00000636603 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.91■□□□□ 0.62
CHRNA7-217ENST00000636603 SSFA2P28290 1259 aa18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 ZNF594Q96JF6 807 aaPredicted RBP18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 LRRCC1Q9C099 1032 aa18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 SH3TC1Q8TE82 1336 aa18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 CDHR2Q9BYE9 1310 aa18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 ADRA2BP18089 450 aa18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 PTPN12Q05209 780 aaKnown RBP18.9■□□□□ 0.62
CHRNA7-217ENST00000636603 BAG6P46379 1132 aa18.89■□□□□ 0.61
CHRNA7-217ENST00000636603 ERFEQ4G0M1 354 aa18.89■□□□□ 0.61
CHRNA7-217ENST00000636603 SETDB2Q96T68 719 aa18.89■□□□□ 0.61
CHRNA7-217ENST00000636603 PLA2G12BQ9BX93 195 aa18.89■□□□□ 0.61
CHRNA7-217ENST00000636603 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
CHRNA7-217ENST00000636603 GYS1P13807 737 aa18.88■□□□□ 0.61
CHRNA7-217ENST00000636603 COL23A1Q86Y22 540 aaPredicted RBP18.88■□□□□ 0.61
CHRNA7-217ENST00000636603 TTLL11Q8NHH1 800 aa18.88■□□□□ 0.61
CHRNA7-217ENST00000636603 RHPN1Q8TCX5 695 aa18.88■□□□□ 0.61
CHRNA7-217ENST00000636603 TUBGCP6Q96RT7 1819 aa18.88■□□□□ 0.61
CHRNA7-217ENST00000636603 CTSWP56202 376 aa18.88■□□□□ 0.61
CHRNA7-217ENST00000636603 NFIXQ14938 502 aa18.88■□□□□ 0.61
CHRNA7-217ENST00000636603 PDE8AO60658 829 aa18.87■□□□□ 0.61
CHRNA7-217ENST00000636603 CSF1RP07333 972 aa18.87■□□□□ 0.61
CHRNA7-217ENST00000636603 GREM2Q9H772 168 aa18.87■□□□□ 0.61
CHRNA7-217ENST00000636603 SASH1O94885 1247 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 RBM25P49756 843 aaKnown RBP18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 G3BP1Q13283 466 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 BMP2KLQ5H9B9 411 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 PLEKHM2Q8IWE5 1019 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 BRPF3Q9ULD4 1205 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 MYH3P11055 1940 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 SOCS7O14512 581 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 RAB11FIP3O75154 756 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 C3orf67Q6ZVT6 689 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 NBPF5PQ86XG9 351 aaPredicted RBP18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 COPRSQ9NQ92 184 aa18.86■□□□□ 0.61
CHRNA7-217ENST00000636603 KIF1BPQ96EK5 621 aa18.85■□□□□ 0.61
CHRNA7-217ENST00000636603 PUS3Q9BZE2 481 aaKnown RBP18.85■□□□□ 0.61
CHRNA7-217ENST00000636603 DDX60Q8IY21 1712 aaKnown RBP18.85■□□□□ 0.61
CHRNA7-217ENST00000636603 RGL2O15211 777 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 CCDC57Q2TAC2 916 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 PNPLA7Q6ZV29 1317 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 ABCC12Q96J65 1359 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 ITGA6P23229 1130 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 LRRC24Q50LG9 513 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 HSP90AB4PQ58FF6 505 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
CHRNA7-217ENST00000636603 IFIT5Q13325 482 aaKnown RBP18.83■□□□□ 0.6
CHRNA7-217ENST00000636603 KIF2CQ99661 725 aa18.83■□□□□ 0.6
CHRNA7-217ENST00000636603 SEC31BQ9NQW1 1179 aa18.83■□□□□ 0.6
CHRNA7-217ENST00000636603 ATG9AQ7Z3C6 839 aa18.82■□□□□ 0.6
CHRNA7-217ENST00000636603 COL24A1Q17RW2 1714 aa18.82■□□□□ 0.6
CHRNA7-217ENST00000636603 TFCP2Q12800 502 aa18.81■□□□□ 0.6
CHRNA7-217ENST00000636603 SLC15A2Q16348 729 aa18.81■□□□□ 0.6
CHRNA7-217ENST00000636603 NPHP1O15259 732 aa18.81■□□□□ 0.6
CHRNA7-217ENST00000636603 DDIT3P35638 169 aa18.81■□□□□ 0.6
CHRNA7-217ENST00000636603 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
CHRNA7-217ENST00000636603 MSL1Q68DK7 614 aa18.81■□□□□ 0.6
CHRNA7-217ENST00000636603 TPTE2Q6XPS3 522 aa18.81■□□□□ 0.6
CHRNA7-217ENST00000636603 HMGB2P26583 209 aaKnown RBP18.8■□□□□ 0.6
CHRNA7-217ENST00000636603 TM4SF1P30408 202 aa18.8■□□□□ 0.6
CHRNA7-217ENST00000636603 DDR1Q08345 913 aa18.8■□□□□ 0.6
CHRNA7-217ENST00000636603 ERC1Q8IUD2 1116 aa18.8■□□□□ 0.6
CHRNA7-217ENST00000636603 NYXQ9GZU5 481 aa18.8■□□□□ 0.6
CHRNA7-217ENST00000636603 TAF1P21675 1872 aa18.8■□□□□ 0.6
CHRNA7-217ENST00000636603 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 EAF2Q96CJ1 260 aaPredicted RBP18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 PDGFDQ9GZP0 370 aaPredicted RBP18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 CCDC8Q9H0W5 538 aaPredicted RBP18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 STK32BQ9NY57 414 aa18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 CARMIL3Q8ND23 1372 aa18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 EYA2O00167 538 aa18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 GSPT1P15170 499 aaKnown RBP18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 PDE1AP54750 535 aa18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 AACSQ86V21 672 aa18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
CHRNA7-217ENST00000636603 COL4A1P02462 1669 aa18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 SERPINB2P05120 415 aa18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 TBC1D9Q6ZT07 1266 aa18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 CLASRPQ8N2M8 674 aaKnown RBP18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 SNX21Q969T3 373 aa18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 CASZ1Q86V15 1759 aa18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 MX1P20591 662 aa18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 SLC10A5Q5PT55 438 aa18.78■□□□□ 0.6
CHRNA7-217ENST00000636603 LAMB2P55268 1798 aa18.77■□□□□ 0.6
CHRNA7-217ENST00000636603 POLRMTO00411 1230 aaKnown RBP18.77■□□□□ 0.6
CHRNA7-217ENST00000636603 CCDC152Q4G0S7 254 aa18.77■□□□□ 0.6
CHRNA7-217ENST00000636603 PRR5LQ6MZQ0 368 aa18.77■□□□□ 0.6
CHRNA7-217ENST00000636603 LDHAL6AQ6ZMR3 332 aa18.77■□□□□ 0.6
CHRNA7-217ENST00000636603 CNBD1Q8NA66 436 aa18.77■□□□□ 0.6
CHRNA7-217ENST00000636603 CHMP5Q9NZZ3 219 aa18.77■□□□□ 0.6
CHRNA7-217ENST00000636603 MCM4P33991 863 aa18.76■□□□□ 0.59
CHRNA7-217ENST00000636603 TTC22Q5TAA0 569 aa18.76■□□□□ 0.59
CHRNA7-217ENST00000636603 FLAD1Q8NFF5 587 aa18.76■□□□□ 0.59
CHRNA7-217ENST00000636603 IFIT2P09913 472 aaKnown RBP18.75■□□□□ 0.59
CHRNA7-217ENST00000636603 IL15P40933 162 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms