RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 RRP1P56182 461 aaKnown RBP6.7□□□□□ -1.34
CHD2-224ENST00000636410 SF3B3Q15393 1217 aaKnown RBP6.7□□□□□ -1.34
CHD2-224ENST00000636410 CCDC152Q4G0S7 254 aa6.7□□□□□ -1.34
CHD2-224ENST00000636410 DALRD3Q5D0E6 543 aaKnown RBP6.7□□□□□ -1.34
CHD2-224ENST00000636410 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
CHD2-224ENST00000636410 ITPRIPQ8IWB1 547 aa6.7□□□□□ -1.34
CHD2-224ENST00000636410 TTLL6Q8N841 843 aa6.7□□□□□ -1.34
CHD2-224ENST00000636410 CNKSR1Q969H4 720 aa6.7□□□□□ -1.34
CHD2-224ENST00000636410 ZNF622Q969S3 477 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD2-224ENST00000636410 RBM17Q96I25 401 aaKnown RBP6.7□□□□□ -1.34
CHD2-224ENST00000636410 CRAMP1Q96RY5 1269 aa6.7□□□□□ -1.34
CHD2-224ENST00000636410 USP44Q9H0E7 712 aa6.7□□□□□ -1.34
CHD2-224ENST00000636410 TIAM2Q8IVF5 1701 aa6.7□□□□□ -1.34
CHD2-224ENST00000636410 GNAI3P08754 354 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 UBTFL1P0CB47 393 aaPredicted RBP6.69□□□□□ -1.34
CHD2-224ENST00000636410 FOXO4P98177 505 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 PDE3AQ14432 1141 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 MVPQ14764 893 aaKnown RBP6.69□□□□□ -1.34
CHD2-224ENST00000636410 PRPF40BQ6NWY9 871 aaKnown RBP6.69□□□□□ -1.34
CHD2-224ENST00000636410 TTLL11Q8NHH1 800 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 PANK1Q8TE04 598 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 SUCLG2Q96I99 432 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 MEIS3Q99687 375 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 DDX19BQ9UMR2 479 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 HDAC5Q9UQL6 1122 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 BCS1LQ9Y276 419 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 DUOX1Q9NRD9 1551 aa6.69□□□□□ -1.34
CHD2-224ENST00000636410 SNED1Q8TER0 1413 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 PPEF1O14829 653 aaPredicted RBP6.68□□□□□ -1.34
CHD2-224ENST00000636410 CSF1RP07333 972 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 YBX3P16989 372 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD2-224ENST00000636410 GRAPQ13588 217 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 FAM161AQ3B820 660 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 RABL6Q3YEC7 729 aaPredicted RBP6.68□□□□□ -1.34
CHD2-224ENST00000636410 EPHA10Q5JZY3 1008 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 C20orf194Q5TEA3 1177 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 SOGA3Q5TF21 947 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 LMBR1LQ6UX01 489 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 TMC4Q7Z404 712 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 PELP1Q8IZL8 1130 aaKnown RBP6.68□□□□□ -1.34
CHD2-224ENST00000636410 GRAPLQ8TC17 118 aaPredicted RBP6.68□□□□□ -1.34
CHD2-224ENST00000636410 KAZALD1Q96I82 304 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 CCDC85AQ96PX6 553 aaPredicted RBP6.68□□□□□ -1.34
CHD2-224ENST00000636410 BICC1Q9H694 974 aaKnown RBP6.68□□□□□ -1.34
CHD2-224ENST00000636410 WWC3Q9ULE0 1092 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 SBF1O95248 1867 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 CCDC88AQ3V6T2 1871 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 CHD4Q14839 1912 aa6.68□□□□□ -1.34
CHD2-224ENST00000636410 DICER1Q9UPY3 1922 aaKnown RBP6.68□□□□□ -1.34
CHD2-224ENST00000636410 ANKRD18BA2A2Z9 1011 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 DCAF8L1A6NGE4 600 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 ZBTB7BO15156 539 aaPredicted RBP6.67□□□□□ -1.34
CHD2-224ENST00000636410 BBOX1O75936 387 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 GNAI2P04899 355 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 ITGA6P23229 1130 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 IFIT5Q13325 482 aaKnown RBP6.67□□□□□ -1.34
CHD2-224ENST00000636410 GPR162Q16538 588 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 ANKRD44Q8N8A2 993 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 CELF1Q92879 486 aaKnown RBP6.67□□□□□ -1.34
CHD2-224ENST00000636410 CDC5LQ99459 802 aaKnown RBP6.67□□□□□ -1.34
CHD2-224ENST00000636410 CHMP4BQ9H444 224 aaKnown RBP6.67□□□□□ -1.34
CHD2-224ENST00000636410 GREM2Q9H772 168 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 SEC31BQ9NQW1 1179 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 COG6Q9Y2V7 657 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 CHMP3Q9Y3E7 222 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 LRRFIP2Q9Y608 721 aaKnown RBP6.67□□□□□ -1.34
CHD2-224ENST00000636410 ARAP2Q8WZ64 1704 aa6.67□□□□□ -1.34
CHD2-224ENST00000636410 C21orf2O43822 256 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 GRIN3BO60391 1043 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 IGHMBP2P38935 993 aaKnown RBP6.66□□□□□ -1.34
CHD2-224ENST00000636410 MTX1Q13505 466 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 CCDC57Q2TAC2 916 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 GRIPAP1Q4V328 841 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 CCDC93Q567U6 631 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 CC2D2BQ6DHV5 1058 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 ANKRD18AQ8IVF6 992 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 SP8Q8IXZ3 490 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 C7orf43Q8WVR3 580 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 TMX4Q9H1E5 349 aaPredicted RBP6.66□□□□□ -1.34
CHD2-224ENST00000636410 ZNF219Q9P2Y4 722 aaPredicted RBP6.66□□□□□ -1.34
CHD2-224ENST00000636410 ATP6V0A2Q9Y487 856 aa6.66□□□□□ -1.34
CHD2-224ENST00000636410 CENPBP07199 599 aaPredicted RBP6.65□□□□□ -1.34
CHD2-224ENST00000636410 RPS8P62241 208 aaKnown RBP6.65□□□□□ -1.34
CHD2-224ENST00000636410 TAF7LQ5H9L4 462 aa6.65□□□□□ -1.34
CHD2-224ENST00000636410 RTKN2Q8IZC4 609 aa6.65□□□□□ -1.34
CHD2-224ENST00000636410 MPHOSPH8Q99549 860 aa6.65□□□□□ -1.34
CHD2-224ENST00000636410 C1orf115Q9H7X2 142 aa6.65□□□□□ -1.34
CHD2-224ENST00000636410 BSDC1Q9NW68 430 aaPredicted RBP6.65□□□□□ -1.34
CHD2-224ENST00000636410 SUPT16HQ9Y5B9 1047 aaKnown RBP6.65□□□□□ -1.34
CHD2-224ENST00000636410 LTBP3Q9NS15 1303 aa6.65□□□□□ -1.35
CHD2-224ENST00000636410 PSME4Q14997 1843 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 NFKBIEO00221 500 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 SRGAP3O43295 1099 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 RFX5P48382 616 aaPredicted RBP6.64□□□□□ -1.35
CHD2-224ENST00000636410 FKBP4Q02790 459 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHD2-224ENST00000636410 OLFM4Q6UX06 510 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 ARHGAP27Q6ZUM4 889 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 SLC51AQ86UW1 340 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 ZNF594Q96JF6 807 aaPredicted RBP6.64□□□□□ -1.35
CHD2-224ENST00000636410 CRBNQ96SW2 442 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms