RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 RAD51AP2Q09MP3 1159 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 ZNF75DP51815 510 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 MSL1Q68DK7 614 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 ELP1O95163 1332 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 CCDC141Q6ZP82 1450 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 FGFR1OPO95684 399 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 GJB2P29033 226 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 MYZAPP0CAP1 466 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 CCDC121Q6ZUS5 278 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 ZGPATQ8N5A5 531 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 CAMSAP2Q08AD1 1489 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 TMCO5BA8MYB1 307 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 TRIM27P14373 513 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 FAM76AQ8TAV0 307 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 NCAPGQ9BPX3 1015 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 ANKRD50Q9ULJ7 1429 aa11.24□□□□□ -0.61
SPTAN1-228ENST00000635853 F13A1P00488 732 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 GPT2Q8TD30 523 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 NAPBQ9H115 298 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 CTAGE15A4D2H0 777 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 CTAGE8P0CG41 777 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 ST5P78524 1137 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 CTAGE6Q86UF2 777 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 CTAGE4Q8IX94 777 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 RFX1P22670 979 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 MAGEA9P43362 315 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 IFFO1Q0D2I5 559 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 CETN1Q12798 172 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 HSF2BPO75031 334 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 PPP2R3AQ06190 1150 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
SPTAN1-228ENST00000635853 MYO1CO00159 1063 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 MAP3K12Q12852 859 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 PDLIM2Q96JY6 352 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 RALGAPBQ86X10 1494 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 ARL1P40616 181 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 SYCP3Q8IZU3 236 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 MYD88Q99836 296 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 TRMT112Q9UI30 125 aaKnown RBP11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 HLA-DOAP06340 250 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 TTC21AQ8NDW8 1320 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■■■□□ 16
SPTAN1-228ENST00000635853 ARHGAP25P42331 645 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.22□□□□□ -0.611e-6■■■□□ 15.3
SPTAN1-228ENST00000635853 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 A6NNZ2 444 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 DAPK1P53355 1430 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 NLRP5P59047 1200 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 NCBP1Q09161 790 aaKnown RBP11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 TUBB8Q3ZCM7 444 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 SPTY2D1Q68D10 685 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 DNAJC25Q9H1X3 360 aa11.22□□□□□ -0.61
SPTAN1-228ENST00000635853 PPP2R5AQ15172 486 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 STXBP4Q6ZWJ1 553 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 KCNH5Q8NCM2 988 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 SSH1Q8WYL5 1049 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 SPATS2LQ9NUQ6 558 aaKnown RBP11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 ACTN2P35609 894 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 DNA2P51530 1060 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 CFAP70Q5T0N1 1121 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 BIN2Q9UBW5 565 aaPredicted RBP11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 PYCARDQ9ULZ3 195 aa11.21□□□□□ -0.61
SPTAN1-228ENST00000635853 CCDC194A0A1B0GVG4 234 aa11.21□□□□□ -0.62
SPTAN1-228ENST00000635853 IQCA1Q86XH1 822 aa11.21□□□□□ -0.62
SPTAN1-228ENST00000635853 CCDC114Q96M63 670 aa11.21□□□□□ -0.62
SPTAN1-228ENST00000635853 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.62
SPTAN1-228ENST00000635853 GPR161Q8N6U8 529 aaKnown RBP11.21□□□□□ -0.62
SPTAN1-228ENST00000635853 SUDS3Q9H7L9 328 aaPredicted RBP11.21□□□□□ -0.62
SPTAN1-228ENST00000635853 ZNF215Q9UL58 517 aaPredicted RBP11.21□□□□□ -0.62
SPTAN1-228ENST00000635853 A0A087WZG4 1122 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 PRC1O43663 620 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 RRS1Q15050 365 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 SYNCQ9H7C4 482 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 SSRP1Q08945 709 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 IFIT5Q13325 482 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 RFC4P35249 363 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 GCKP35557 465 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 CKAP4Q07065 602 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 TUBB2AQ13885 445 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 TAF12Q16514 161 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 FERMT3Q86UX7 667 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 RAB3IL1Q8TBN0 382 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 KIAA1524Q8TCG1 905 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 TUBB2BQ9BVA1 445 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 ZSWIM4Q9H7M6 989 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 IL1RAPL2Q9NP60 686 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 SLC12A7Q9Y666 1083 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 SLC20A2Q08357 652 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 MMS22LQ6ZRQ5 1243 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
SPTAN1-228ENST00000635853 U3KPZ7 1027 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms