RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 UTRNP46939 3433 aa19.57■□□□□ 0.72
CLN6-211ENST00000635754 ABCC4O15439 1325 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 TAF1P21675 1872 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 C21orf2O43822 256 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 CCT4P50991 539 aaKnown RBP19.56■□□□□ 0.72
CLN6-211ENST00000635754 CASP7P55210 303 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 CCDC152Q4G0S7 254 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 SOGA3Q5TF21 947 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 ATF7IPQ6VMQ6 1270 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 ARHGAP27Q6ZUM4 889 aa19.56■□□□□ 0.72
CLN6-211ENST00000635754 CTSWP56202 376 aa19.55■□□□□ 0.72
CLN6-211ENST00000635754 ZKSCAN2Q63HK3 967 aa19.55■□□□□ 0.72
CLN6-211ENST00000635754 FER1L6Q2WGJ9 1857 aa19.54■□□□□ 0.72
CLN6-211ENST00000635754 PPEF1O14829 653 aaPredicted RBP19.54■□□□□ 0.72
CLN6-211ENST00000635754 TRIM27P14373 513 aa19.54■□□□□ 0.72
CLN6-211ENST00000635754 PLA2G12BQ9BX93 195 aa19.54■□□□□ 0.72
CLN6-211ENST00000635754 RCAN3Q9UKA8 241 aa19.54■□□□□ 0.72
CLN6-211ENST00000635754 GRAPQ13588 217 aa19.53■□□□□ 0.72
CLN6-211ENST00000635754 GRAPLQ8TC17 118 aaPredicted RBP19.53■□□□□ 0.72
CLN6-211ENST00000635754 CCDC93Q567U6 631 aa19.52■□□□□ 0.72
CLN6-211ENST00000635754 TTLL11Q8NHH1 800 aa19.52■□□□□ 0.72
CLN6-211ENST00000635754 C7orf43Q8WVR3 580 aa19.52■□□□□ 0.72
CLN6-211ENST00000635754 UTYO14607 1347 aa19.52■□□□□ 0.72
CLN6-211ENST00000635754 BBOX1O75936 387 aa19.51■□□□□ 0.71
CLN6-211ENST00000635754 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
CLN6-211ENST00000635754 CCDC85AQ96PX6 553 aaPredicted RBP19.51■□□□□ 0.71
CLN6-211ENST00000635754 TMX4Q9H1E5 349 aaPredicted RBP19.51■□□□□ 0.71
CLN6-211ENST00000635754 RTL9Q8NET4 1388 aa19.51■□□□□ 0.71
CLN6-211ENST00000635754 NBPF7P0C2Y1 421 aaPredicted RBP19.51■□□□□ 0.71
CLN6-211ENST00000635754 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
CLN6-211ENST00000635754 CC2D2BQ6DHV5 1058 aa19.51■□□□□ 0.71
CLN6-211ENST00000635754 TMC4Q7Z404 712 aa19.51■□□□□ 0.71
CLN6-211ENST00000635754 LRRC37AA6NMS7 1700 aa19.5■□□□□ 0.71
CLN6-211ENST00000635754 SBF1O95248 1867 aa19.5■□□□□ 0.71
CLN6-211ENST00000635754 FTSJ3Q8IY81 847 aaKnown RBP19.5■□□□□ 0.71
CLN6-211ENST00000635754 USP44Q9H0E7 712 aa19.5■□□□□ 0.71
CLN6-211ENST00000635754 TNNQ9UQP3 1299 aa19.5■□□□□ 0.71
CLN6-211ENST00000635754 COL4A1P02462 1669 aa19.49■□□□□ 0.71
CLN6-211ENST00000635754 SPEF2Q9C093 1822 aa19.49■□□□□ 0.71
CLN6-211ENST00000635754 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
CLN6-211ENST00000635754 RTKN2Q8IZC4 609 aa19.49■□□□□ 0.71
CLN6-211ENST00000635754 CELF1Q92879 486 aaKnown RBP19.49■□□□□ 0.71
CLN6-211ENST00000635754 GREM2Q9H772 168 aa19.49■□□□□ 0.71
CLN6-211ENST00000635754 SEC31BQ9NQW1 1179 aa19.49■□□□□ 0.71
CLN6-211ENST00000635754 ATP6V0A2Q9Y487 856 aa19.49■□□□□ 0.71
CLN6-211ENST00000635754 CCDC88AQ3V6T2 1871 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 NFKBIEO00221 500 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 CSF1RP07333 972 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 RPS8P62241 208 aaKnown RBP19.48■□□□□ 0.71
CLN6-211ENST00000635754 FOXO4P98177 505 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 RASSF7Q02833 373 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 DZIP1LQ8IYY4 767 aaKnown RBP19.48■□□□□ 0.71
CLN6-211ENST00000635754 SUCLG2Q96I99 432 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 CDC5LQ99459 802 aaKnown RBP19.48■□□□□ 0.71
CLN6-211ENST00000635754 TAOK3Q9H2K8 898 aa19.48■□□□□ 0.71
CLN6-211ENST00000635754 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
CLN6-211ENST00000635754 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
CLN6-211ENST00000635754 ANKRD18AQ8IVF6 992 aa19.47■□□□□ 0.71
CLN6-211ENST00000635754 SP8Q8IXZ3 490 aa19.47■□□□□ 0.71
CLN6-211ENST00000635754 CHMP3Q9Y3E7 222 aa19.47■□□□□ 0.71
CLN6-211ENST00000635754 LTBP3Q9NS15 1303 aa19.47■□□□□ 0.71
CLN6-211ENST00000635754 SNED1Q8TER0 1413 aa19.46■□□□□ 0.71
CLN6-211ENST00000635754 ITGA6P23229 1130 aa19.46■□□□□ 0.71
CLN6-211ENST00000635754 EPHA10Q5JZY3 1008 aa19.46■□□□□ 0.71
CLN6-211ENST00000635754 LMBR1LQ6UX01 489 aa19.46■□□□□ 0.71
CLN6-211ENST00000635754 MS4A1P11836 297 aa19.45■□□□□ 0.7
CLN6-211ENST00000635754 FKBP4Q02790 459 aaKnown RBP eCLIP19.45■□□□□ 0.7
CLN6-211ENST00000635754 TMEM57Q8N5G2 664 aa19.45■□□□□ 0.7
CLN6-211ENST00000635754 HDAC5Q9UQL6 1122 aa19.45■□□□□ 0.7
CLN6-211ENST00000635754 DICER1Q9UPY3 1922 aaKnown RBP19.44■□□□□ 0.7
CLN6-211ENST00000635754 ANKRD18BA2A2Z9 1011 aa19.44■□□□□ 0.7
CLN6-211ENST00000635754 LMNB1P20700 586 aa19.44■□□□□ 0.7
CLN6-211ENST00000635754 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.44■□□□□ 0.7
CLN6-211ENST00000635754 KAZALD1Q96I82 304 aa19.44■□□□□ 0.7
CLN6-211ENST00000635754 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
CLN6-211ENST00000635754 TIAM2Q8IVF5 1701 aa19.44■□□□□ 0.7
CLN6-211ENST00000635754 GNAI3P08754 354 aa19.43■□□□□ 0.7
CLN6-211ENST00000635754 YY1P25490 414 aa19.43■□□□□ 0.7
CLN6-211ENST00000635754 IGHMBP2P38935 993 aaKnown RBP19.43■□□□□ 0.7
CLN6-211ENST00000635754 IFIT5Q13325 482 aaKnown RBP19.43■□□□□ 0.7
CLN6-211ENST00000635754 C9orf131Q5VYM1 1079 aa19.43■□□□□ 0.7
CLN6-211ENST00000635754 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
CLN6-211ENST00000635754 PSMD1Q99460 953 aa19.43■□□□□ 0.7
CLN6-211ENST00000635754 MEIS3Q99687 375 aa19.43■□□□□ 0.7
CLN6-211ENST00000635754 RNF181Q9P0P0 153 aa19.43■□□□□ 0.7
CLN6-211ENST00000635754 RLBP1P12271 317 aa19.42■□□□□ 0.7
CLN6-211ENST00000635754 CCDC57Q2TAC2 916 aa19.42■□□□□ 0.7
CLN6-211ENST00000635754 DPP8Q6V1X1 898 aaPredicted RBP19.42■□□□□ 0.7
CLN6-211ENST00000635754 RABL6Q3YEC7 729 aaPredicted RBP19.42■□□□□ 0.7
CLN6-211ENST00000635754 ITPRIPQ8IWB1 547 aa19.42■□□□□ 0.7
CLN6-211ENST00000635754 MPNDQ8N594 471 aa19.42■□□□□ 0.7
CLN6-211ENST00000635754 MPHOSPH8Q99549 860 aa19.42■□□□□ 0.7
CLN6-211ENST00000635754 BSDC1Q9NW68 430 aaPredicted RBP19.42■□□□□ 0.7
CLN6-211ENST00000635754 LTBP1Q14766 1721 aa19.41■□□□□ 0.7
CLN6-211ENST00000635754 PLIN1O60240 522 aa19.41■□□□□ 0.7
CLN6-211ENST00000635754 TAF7LQ5H9L4 462 aa19.41■□□□□ 0.7
CLN6-211ENST00000635754 ANKRD44Q8N8A2 993 aa19.41■□□□□ 0.7
CLN6-211ENST00000635754 PRELPP51888 382 aa19.4■□□□□ 0.7
CLN6-211ENST00000635754 SUPT20HQ8NEM7 779 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms