RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 ZBTB39O15060 712 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 SIAH2O43255 324 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 ITGBL1O95965 494 aaPredicted RBP10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 HSPA2P54652 639 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 TLR1Q15399 786 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 ENOX2Q16206 610 aaKnown RBP10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 TMEM87AQ8NBN3 555 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 HRH3Q9Y5N1 445 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 USP3Q9Y6I4 520 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 CAMSAP1Q5T5Y3 1602 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 EML1O00423 815 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 CD2BP2O95400 341 aaKnown RBP10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 MZF1P28698 734 aaPredicted RBP10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 USP5P45974 858 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 RAD51AP2Q09MP3 1159 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 PSMD2Q13200 908 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 TEAD4Q15561 434 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 FAM26DQ5JW98 314 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 METTL16Q86W50 562 aaKnown RBP10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 PIK3R5Q8WYR1 880 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 PUS7Q96PZ0 661 aaKnown RBP10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 ESYT1Q9BSJ8 1104 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 POLIQ9UNA4 740 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 EMILIN1Q9Y6C2 1016 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 ABCC5O15440 1437 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 ABCC3O15438 1527 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 DUOX2Q9NRD8 1548 aa10.23□□□□□ -0.77
SMARCA2-244ENST00000635659 SERTM1A2A2V5 107 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 RTN1Q16799 776 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 C9orf131Q5VYM1 1079 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 ALG1LQ6GMV1 187 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 ATCAYQ86WG3 371 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 CNKSR1Q969H4 720 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 VTI1BQ9UEU0 232 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 WWC3Q9ULE0 1092 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 ZMYM3Q14202 1370 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 DAPK1P53355 1430 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 PZPP20742 1482 aa10.22□□□□□ -0.77
SMARCA2-244ENST00000635659 NR3C2P08235 984 aa10.21□□□□□ -0.77
SMARCA2-244ENST00000635659 NT5DC4Q86YG4 428 aa10.21□□□□□ -0.77
SMARCA2-244ENST00000635659 FAM177A1Q8N128 213 aaPredicted RBP10.21□□□□□ -0.77
SMARCA2-244ENST00000635659 NIF3L1Q9GZT8 377 aa10.21□□□□□ -0.77
SMARCA2-244ENST00000635659 RNF19AQ9NV58 838 aa10.21□□□□□ -0.77
SMARCA2-244ENST00000635659 NCOA1Q15788 1441 aa10.21□□□□□ -0.78
SMARCA2-244ENST00000635659 PNMA6FA0A0J9YX94 578 aa10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 ADH1AP07327 375 aa10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 FANCCQ00597 558 aa10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 C11orf91Q3C1V1 193 aa10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 ETFBKMTQ8IXQ9 262 aa10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 ALDH16A1Q8IZ83 802 aa10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 RNF166Q96A37 237 aaPredicted RBP10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
SMARCA2-244ENST00000635659 CFAP65Q6ZU64 1925 aaKnown RBP10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 SPATA31D1Q6ZQQ2 1576 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 ADGRL2O95490 1459 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 ERBINQ96RT1 1412 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 PDGFAP04085 211 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 HSP90B1P14625 803 aaKnown RBP10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 NOS2P35228 1153 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 CLN3Q13286 438 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 ZNF295-AS1Q8N0V1 137 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 FBF1Q8TES7 1133 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 ZDHHC1Q8WTX9 485 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 RNF34Q969K3 372 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 SETDB2Q96T68 719 aa10.19□□□□□ -0.78
SMARCA2-244ENST00000635659 VWDEQ8N2E2 1590 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 PLA2R1Q13018 1463 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 GNA15P30679 374 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 ZAP70P43403 619 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 DNM1Q05193 864 aaKnown RBP10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 DGKZQ13574 1117 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 SH3PXD2AQ5TCZ1 1133 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 EDEM1Q92611 657 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 PPP1R1BQ9UD71 204 aaPredicted RBP10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 ZNF232Q9UNY5 417 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 NEURL4Q96JN8 1562 aa10.18□□□□□ -0.78
SMARCA2-244ENST00000635659 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
SMARCA2-244ENST00000635659 KIF15Q9NS87 1388 aa10.17□□□□□ -0.78
SMARCA2-244ENST00000635659 GGT6Q6P531 493 aa10.17□□□□□ -0.78
SMARCA2-244ENST00000635659 CABP1Q9NZU7 370 aa10.17□□□□□ -0.78
SMARCA2-244ENST00000635659 WNT7AO00755 349 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 KIF3BO15066 747 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 ZNF76P36508 570 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 PPP1R18Q6NYC8 613 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 L3MBTL2Q969R5 705 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 IFT43Q96FT9 208 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 FRMD6Q96NE9 622 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 TINF2Q9BSI4 451 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 UBR1Q8IWV7 1749 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 PTPRTO14522 1441 aa10.16□□□□□ -0.78
SMARCA2-244ENST00000635659 LTBP4Q8N2S1 1624 aa10.15□□□□□ -0.78
SMARCA2-244ENST00000635659 TSPY4P0CV99 314 aa10.15□□□□□ -0.78
SMARCA2-244ENST00000635659 TSPY10P0CW01 314 aa10.15□□□□□ -0.78
SMARCA2-244ENST00000635659 PCSK2P16519 638 aa10.15□□□□□ -0.78
SMARCA2-244ENST00000635659 KDF1Q8NAX2 398 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms