RNA–Protein interactions for RNA: ENST00000635556.1

LINC01646-203, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 5

Gene LINC01646, Length 914 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-203ENST00000635556 POLRMTO00411 1230 aaKnown RBP12.17□□□□□ -0.46
LINC01646-203ENST00000635556 RFX5P48382 616 aaPredicted RBP12.17□□□□□ -0.46
LINC01646-203ENST00000635556 ERFEQ4G0M1 354 aa12.17□□□□□ -0.46
LINC01646-203ENST00000635556 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
LINC01646-203ENST00000635556 LMBR1LQ6UX01 489 aa12.17□□□□□ -0.46
LINC01646-203ENST00000635556 ILDR2Q71H61 639 aa12.17□□□□□ -0.46
LINC01646-203ENST00000635556 NUTM1Q86Y26 1132 aa12.17□□□□□ -0.46
LINC01646-203ENST00000635556 CNBD1Q8NA66 436 aa12.17□□□□□ -0.46
LINC01646-203ENST00000635556 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
LINC01646-203ENST00000635556 FAM177BA6PVY3 158 aa12.16□□□□□ -0.46
LINC01646-203ENST00000635556 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
LINC01646-203ENST00000635556 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
LINC01646-203ENST00000635556 TPTE2Q6XPS3 522 aa12.16□□□□□ -0.46
LINC01646-203ENST00000635556 SLC16A10Q8TF71 515 aa12.16□□□□□ -0.46
LINC01646-203ENST00000635556 COPRSQ9NQ92 184 aa12.16□□□□□ -0.46
LINC01646-203ENST00000635556 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
LINC01646-203ENST00000635556 SERPINB2P05120 415 aa12.15□□□□□ -0.46
LINC01646-203ENST00000635556 HCLS1P14317 486 aaPredicted RBP12.15□□□□□ -0.46
LINC01646-203ENST00000635556 TTLL11Q8NHH1 800 aa12.15□□□□□ -0.46
LINC01646-203ENST00000635556 MMP10P09238 476 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 GTF2E1P29083 439 aaPredicted RBP12.14□□□□□ -0.47
LINC01646-203ENST00000635556 ST5P78524 1137 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 NUCB1Q02818 461 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 PTPN12Q05209 780 aaKnown RBP12.14□□□□□ -0.47
LINC01646-203ENST00000635556 SF3B3Q15393 1217 aaKnown RBP12.14□□□□□ -0.47
LINC01646-203ENST00000635556 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 GREM2Q9H772 168 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
LINC01646-203ENST00000635556 RAB11FIP3O75154 756 aa12.13□□□□□ -0.47
LINC01646-203ENST00000635556 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
LINC01646-203ENST00000635556 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
LINC01646-203ENST00000635556 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
LINC01646-203ENST00000635556 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
LINC01646-203ENST00000635556 COL4A1P02462 1669 aa12.13□□□□□ -0.47
LINC01646-203ENST00000635556 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 NPHP1O15259 732 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
LINC01646-203ENST00000635556 CIAO1O76071 339 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 ITGA6P23229 1130 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
LINC01646-203ENST00000635556 CCDC57Q2TAC2 916 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 CHD1LQ86WJ1 897 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 PDGFDQ9GZP0 370 aaPredicted RBP12.12□□□□□ -0.47
LINC01646-203ENST00000635556 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
LINC01646-203ENST00000635556 A0A1B0GUL6 1792 aa12.11□□□□□ -0.47
LINC01646-203ENST00000635556 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
LINC01646-203ENST00000635556 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
LINC01646-203ENST00000635556 KLHDC4Q8TBB5 520 aa12.11□□□□□ -0.47
LINC01646-203ENST00000635556 KIF1BPQ96EK5 621 aa12.11□□□□□ -0.47
LINC01646-203ENST00000635556 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
LINC01646-203ENST00000635556 CCDC85AQ96PX6 553 aaPredicted RBP12.11□□□□□ -0.47
LINC01646-203ENST00000635556 LRRCC1Q9C099 1032 aa12.11□□□□□ -0.47
LINC01646-203ENST00000635556 KIF13BQ9NQT8 1826 aa12.11□□□□□ -0.47
LINC01646-203ENST00000635556 SPEF2Q9C093 1822 aa12.1□□□□□ -0.47
LINC01646-203ENST00000635556 EYA2O00167 538 aa12.1□□□□□ -0.47
LINC01646-203ENST00000635556 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
LINC01646-203ENST00000635556 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC01646-203ENST00000635556 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
LINC01646-203ENST00000635556 RHPN1Q8TCX5 695 aa12.1□□□□□ -0.47
LINC01646-203ENST00000635556 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
LINC01646-203ENST00000635556 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
LINC01646-203ENST00000635556 LRRC37AA6NMS7 1700 aa12.1□□□□□ -0.47
LINC01646-203ENST00000635556 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
LINC01646-203ENST00000635556 R3HDM1Q15032 1099 aaKnown RBP12.09□□□□□ -0.47
LINC01646-203ENST00000635556 TAF7LQ5H9L4 462 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 ATG9AQ7Z3C6 839 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 CCDC24Q8N4L8 307 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 ZNF594Q96JF6 807 aaPredicted RBP12.09□□□□□ -0.47
LINC01646-203ENST00000635556 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 LNPKQ9C0E8 428 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 SIL1Q9H173 461 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 ZNF609O15014 1411 aa12.09□□□□□ -0.47
LINC01646-203ENST00000635556 ARAP2Q8WZ64 1704 aa12.08□□□□□ -0.47
LINC01646-203ENST00000635556 SASH1O94885 1247 aa12.08□□□□□ -0.48
LINC01646-203ENST00000635556 PDE4AP27815 886 aa12.08□□□□□ -0.48
LINC01646-203ENST00000635556 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
LINC01646-203ENST00000635556 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
LINC01646-203ENST00000635556 SALL3Q9BXA9 1300 aa12.08□□□□□ -0.48
LINC01646-203ENST00000635556 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
LINC01646-203ENST00000635556 HOXA10P31260 410 aaPredicted RBP12.07□□□□□ -0.48
LINC01646-203ENST00000635556 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
LINC01646-203ENST00000635556 LRRC24Q50LG9 513 aa12.07□□□□□ -0.48
LINC01646-203ENST00000635556 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
LINC01646-203ENST00000635556 APBB1O00213 710 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 ZBTB7AO95365 584 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 PDE6BP35913 854 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 GRAPQ13588 217 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 LDHAL6AQ6ZMR3 332 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 DDX46Q7L014 1031 aaKnown RBP12.06□□□□□ -0.48
LINC01646-203ENST00000635556 SKAP1Q86WV1 359 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 VGLL2Q8N8G2 317 aa12.06□□□□□ -0.48
LINC01646-203ENST00000635556 GRAPLQ8TC17 118 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms