RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 CHMP3Q9Y3E7 222 aa13.92□□□□□ -0.18
SMARCA2-230ENST00000634925 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
SMARCA2-230ENST00000634925 KDM2BQ8NHM5 1336 aa13.91□□□□□ -0.18
SMARCA2-230ENST00000634925 HMMRO75330 724 aa13.91□□□□□ -0.18
SMARCA2-230ENST00000634925 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
SMARCA2-230ENST00000634925 RFX5P48382 616 aaPredicted RBP13.9□□□□□ -0.18
SMARCA2-230ENST00000634925 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
SMARCA2-230ENST00000634925 KLHDC4Q8TBB5 520 aa13.9□□□□□ -0.18
SMARCA2-230ENST00000634925 GREM2Q9H772 168 aa13.9□□□□□ -0.18
SMARCA2-230ENST00000634925 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
SMARCA2-230ENST00000634925 HSP90B1P14625 803 aaKnown RBP13.89□□□□□ -0.19
SMARCA2-230ENST00000634925 ST5P78524 1137 aa13.89□□□□□ -0.19
SMARCA2-230ENST00000634925 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
SMARCA2-230ENST00000634925 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
SMARCA2-230ENST00000634925 COL4A1P02462 1669 aa13.89□□□□□ -0.19
SMARCA2-230ENST00000634925 SF3B3Q15393 1217 aaKnown RBP13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 RIC1Q4ADV7 1423 aa13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 ITGA6P23229 1130 aa13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 CCDC152Q4G0S7 254 aa13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 CENPQQ7L2Z9 268 aaPredicted RBP13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 ZNF594Q96JF6 807 aaPredicted RBP13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 SEC31BQ9NQW1 1179 aa13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 EXOC6BQ9Y2D4 811 aa13.88□□□□□ -0.19
SMARCA2-230ENST00000634925 IFIT5Q13325 482 aaKnown RBP13.87□□□□□ -0.19
SMARCA2-230ENST00000634925 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
SMARCA2-230ENST00000634925 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
SMARCA2-230ENST00000634925 COL11A2P13942 1736 aaPredicted RBP13.86□□□□□ -0.19
SMARCA2-230ENST00000634925 SURF6O75683 361 aaKnown RBP13.86□□□□□ -0.19
SMARCA2-230ENST00000634925 GCC1Q96CN9 775 aa13.86□□□□□ -0.19
SMARCA2-230ENST00000634925 SIL1Q9H173 461 aa13.86□□□□□ -0.19
SMARCA2-230ENST00000634925 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
SMARCA2-230ENST00000634925 RTL9Q8NET4 1388 aa13.86□□□□□ -0.19
SMARCA2-230ENST00000634925 CACNA1SQ13698 1873 aa13.86□□□□□ -0.19
SMARCA2-230ENST00000634925 ANKRD18BA2A2Z9 1011 aa13.85□□□□□ -0.19
SMARCA2-230ENST00000634925 APBB1O00213 710 aa13.85□□□□□ -0.19
SMARCA2-230ENST00000634925 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
SMARCA2-230ENST00000634925 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
SMARCA2-230ENST00000634925 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
SMARCA2-230ENST00000634925 KLRG2A4D1S0 409 aaPredicted RBP13.84□□□□□ -0.19
SMARCA2-230ENST00000634925 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
SMARCA2-230ENST00000634925 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
SMARCA2-230ENST00000634925 PUS3Q9BZE2 481 aaKnown RBP13.84□□□□□ -0.19
SMARCA2-230ENST00000634925 LRRC24Q50LG9 513 aa13.83□□□□□ -0.19
SMARCA2-230ENST00000634925 LRP5O75197 1615 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 SOCS7O14512 581 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 SMARCA5O60264 1052 aaPredicted RBP13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 POLD1P28340 1107 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 PTGER2P43116 358 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 G3BP1Q13283 466 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 ANKRD45Q5TZF3 282 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 SKAP1Q86WV1 359 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 PDZRN3Q9UPQ7 1066 aa13.83□□□□□ -0.2
SMARCA2-230ENST00000634925 A0A1B0GUL6 1792 aa13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 C10orf71Q711Q0 1435 aa13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 EYA2O00167 538 aa13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 SASH1O94885 1247 aa13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 PDE6BP35913 854 aa13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 OS9Q13438 667 aaPredicted RBP13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 DDX46Q7L014 1031 aaKnown RBP13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.82□□□□□ -0.2
SMARCA2-230ENST00000634925 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 NUCB1Q02818 461 aa13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 LDHAL6AQ6ZMR3 332 aa13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 BCL11AQ9H165 835 aa13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 DLEC1Q9Y238 1755 aa13.81□□□□□ -0.2
SMARCA2-230ENST00000634925 SRGNP10124 158 aa13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 HOXA10P31260 410 aaPredicted RBP13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 RBM17Q96I25 401 aaKnown RBP13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 LRRCC1Q9C099 1032 aa13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 KIAA1551Q9HCM1 1747 aa13.8□□□□□ -0.2
SMARCA2-230ENST00000634925 CIAO1O76071 339 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 CHRNA5P30532 468 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 IGHMBP2P38935 993 aaKnown RBP13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 GRAPQ13588 217 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 C2CD5Q86YS7 1000 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 KIF1BPQ96EK5 621 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 MPHOSPH8Q99549 860 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 CNNM1Q9NRU3 951 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 SLX4Q8IY92 1834 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 NPR1P16066 1061 aa13.79□□□□□ -0.2
SMARCA2-230ENST00000634925 TFCP2Q12800 502 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms