RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZBTB1Q9Y2K1 713 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 SNX14Q9Y5W7 946 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 DOT1LQ8TEK3 1739 aa6.72□□□□□ -1.33
NEK3-211ENST00000629912 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.72□□□□□ -1.33
NEK3-211ENST00000629912 LOC102724428A0A0B4J2F2 783 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 PDE8AO60658 829 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 CYP2E1P05181 493 aaPredicted RBP6.71□□□□□ -1.34
NEK3-211ENST00000629912 SIK1P57059 783 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 TIMM10P62072 90 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 PTH1RQ03431 593 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 NMIQ13287 307 aaPredicted RBP6.71□□□□□ -1.34
NEK3-211ENST00000629912 LRRC24Q50LG9 513 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 USPL1Q5W0Q7 1092 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 DZIP3Q86Y13 1208 aaKnown RBP6.71□□□□□ -1.34
NEK3-211ENST00000629912 TTLL11Q8NHH1 800 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 TNPO1Q92973 898 aaKnown RBP6.71□□□□□ -1.34
NEK3-211ENST00000629912 SYTL4Q96C24 671 aaPredicted RBP6.71□□□□□ -1.34
NEK3-211ENST00000629912 FAM89AQ96GI7 184 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 TMX3Q96JJ7 454 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 TTC14Q96N46 770 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 GBP4Q96PP9 640 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 DBNDD2Q9BQY9 259 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 ALDH8A1Q9H2A2 487 aaPredicted RBP6.71□□□□□ -1.34
NEK3-211ENST00000629912 ZSWIM6Q9HCJ5 1215 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 CHMP3Q9Y3E7 222 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 RIPOR2Q9Y4F9 1068 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 MYH3P11055 1940 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 BCL9LQ86UU0 1499 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 SPATA31A6Q5VVP1 1343 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 CCDC171Q6TFL3 1326 aa6.71□□□□□ -1.34
NEK3-211ENST00000629912 MYH14Q7Z406 1995 aaKnown RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 DDX11L8A8MPP1 907 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 TAF5LO75529 589 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 HSP90B1P14625 803 aaKnown RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 ATP6V1AP38606 617 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 IFIT5Q13325 482 aaKnown RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 SKOR2Q2VWA4 1001 aaPredicted RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 PARP10Q53GL7 1025 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 RASEFQ8IZ41 740 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 KBTBD3Q8NAB2 608 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 NGLY1Q96IV0 654 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 ZNF594Q96JF6 807 aaPredicted RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 ZNF512BQ96KM6 892 aaPredicted RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 FAM227BQ96M60 508 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 FSD1Q9BTV5 496 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 PUS3Q9BZE2 481 aaKnown RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 HELLSQ9NRZ9 838 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 CCDC9Q9Y3X0 531 aaKnown RBP6.7□□□□□ -1.34
NEK3-211ENST00000629912 SPEF2Q9C093 1822 aa6.7□□□□□ -1.34
NEK3-211ENST00000629912 MED23Q9ULK4 1368 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 A0A1B0GUL7 405 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ANKRD18BA2A2Z9 1011 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 IRS4O14654 1257 aaPredicted RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 CAMTA2O94983 1202 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ZKSCAN1P17029 563 aaPredicted RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 PSMA5P28066 241 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 SSFA2P28290 1259 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 CRKLP46109 303 aaKnown RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 CTSWP56202 376 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ITPK1Q13572 414 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 MCMDC2Q4G0Z9 681 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 CCDC158Q5M9N0 1113 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 RC3H1Q5TC82 1133 aaKnown RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 VPS53Q5VIR6 699 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 RNF20Q5VTR2 975 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 CREB3L3Q68CJ9 461 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 CLEC4GQ6UXB4 293 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ACSBG1Q96GR2 724 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ZSCAN31Q96LW9 406 aaPredicted RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 NEUROD6Q96NK8 337 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ARXQ96QS3 562 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 HMG20BQ9P0W2 317 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 TRMT112Q9UI30 125 aaKnown RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 LIMCH1Q9UPQ0 1083 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 TBC1D2BQ9UPU7 963 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ZNF330Q9Y3S2 320 aaPredicted RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 RBM8AQ9Y5S9 174 aaKnown RBP6.69□□□□□ -1.34
NEK3-211ENST00000629912 PALLDQ8WX93 1383 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ABCC12Q96J65 1359 aa6.69□□□□□ -1.34
NEK3-211ENST00000629912 ZNF609O15014 1411 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 A0A0D9SFI3 127 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 SLC27A2O14975 620 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 TRAK2O60296 914 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 ONECUT3O60422 494 aaPredicted RBP6.68□□□□□ -1.34
NEK3-211ENST00000629912 BAG4O95429 457 aaKnown RBP6.68□□□□□ -1.34
NEK3-211ENST00000629912 IFIT1P09914 478 aaKnown RBP6.68□□□□□ -1.34
NEK3-211ENST00000629912 ITGA6P23229 1130 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 GPTP24298 496 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 FAM98CQ17RN3 349 aaKnown RBP6.68□□□□□ -1.34
NEK3-211ENST00000629912 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
NEK3-211ENST00000629912 TAF7LQ5H9L4 462 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 ZMYM1Q5SVZ6 1142 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 SUSD4Q5VX71 490 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 PRPF40BQ6NWY9 871 aaKnown RBP6.68□□□□□ -1.34
NEK3-211ENST00000629912 LDHAL6AQ6ZMR3 332 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 RUFY3Q7L099 469 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 SYNE4Q8N205 404 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 UTP14AQ9BVJ6 771 aaKnown RBP6.68□□□□□ -1.34
NEK3-211ENST00000629912 GREM2Q9H772 168 aa6.68□□□□□ -1.34
NEK3-211ENST00000629912 FOXD4L1Q9NU39 408 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms