RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
PFDN5-220ENST00000628881 OLFM4Q6UX06 510 aa17.33■□□□□ 0.36
PFDN5-220ENST00000628881 TAOK3Q9H2K8 898 aa17.33■□□□□ 0.36
PFDN5-220ENST00000628881 SNED1Q8TER0 1413 aa17.32■□□□□ 0.36
PFDN5-220ENST00000628881 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
PFDN5-220ENST00000628881 BBOX1O75936 387 aa17.32■□□□□ 0.36
PFDN5-220ENST00000628881 LMNB1P20700 586 aa17.32■□□□□ 0.36
PFDN5-220ENST00000628881 CTSWP56202 376 aa17.32■□□□□ 0.36
PFDN5-220ENST00000628881 RTKN2Q8IZC4 609 aa17.32■□□□□ 0.36
PFDN5-220ENST00000628881 PLA2G12BQ9BX93 195 aa17.32■□□□□ 0.36
PFDN5-220ENST00000628881 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
PFDN5-220ENST00000628881 TAF1P21675 1872 aa17.31■□□□□ 0.36
PFDN5-220ENST00000628881 GRM8O00222 908 aa17.31■□□□□ 0.36
PFDN5-220ENST00000628881 PRELPP51888 382 aa17.31■□□□□ 0.36
PFDN5-220ENST00000628881 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
PFDN5-220ENST00000628881 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
PFDN5-220ENST00000628881 RNF181Q9P0P0 153 aa17.31■□□□□ 0.36
PFDN5-220ENST00000628881 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
PFDN5-220ENST00000628881 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
PFDN5-220ENST00000628881 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
PFDN5-220ENST00000628881 API5Q9BZZ5 524 aaKnown RBP17.3■□□□□ 0.36
PFDN5-220ENST00000628881 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
PFDN5-220ENST00000628881 CCDC88AQ3V6T2 1871 aa17.3■□□□□ 0.36
PFDN5-220ENST00000628881 SP8Q8IXZ3 490 aa17.29■□□□□ 0.36
PFDN5-220ENST00000628881 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
PFDN5-220ENST00000628881 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
PFDN5-220ENST00000628881 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
PFDN5-220ENST00000628881 LRRC37AA6NMS7 1700 aa17.29■□□□□ 0.36
PFDN5-220ENST00000628881 COL4A1P02462 1669 aa17.29■□□□□ 0.36
PFDN5-220ENST00000628881 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
PFDN5-220ENST00000628881 ZC3H4Q9UPT8 1303 aaKnown RBP17.28■□□□□ 0.36
PFDN5-220ENST00000628881 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
PFDN5-220ENST00000628881 DICER1Q9UPY3 1922 aaKnown RBP17.28■□□□□ 0.36
PFDN5-220ENST00000628881 BCAR3O75815 825 aa17.28■□□□□ 0.36
PFDN5-220ENST00000628881 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
PFDN5-220ENST00000628881 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
PFDN5-220ENST00000628881 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
PFDN5-220ENST00000628881 PSMD1Q99460 953 aa17.28■□□□□ 0.36
PFDN5-220ENST00000628881 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
PFDN5-220ENST00000628881 UTYO14607 1347 aa17.27■□□□□ 0.36
PFDN5-220ENST00000628881 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.36
PFDN5-220ENST00000628881 GREM2Q9H772 168 aa17.27■□□□□ 0.36
PFDN5-220ENST00000628881 IPO8O15397 1037 aaKnown RBP17.26■□□□□ 0.35
PFDN5-220ENST00000628881 CSF1RP07333 972 aa17.26■□□□□ 0.35
PFDN5-220ENST00000628881 CCT4P50991 539 aaKnown RBP17.26■□□□□ 0.35
PFDN5-220ENST00000628881 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
PFDN5-220ENST00000628881 FOXO4P98177 505 aa17.25■□□□□ 0.35
PFDN5-220ENST00000628881 ZNF277Q9NRM2 450 aaPredicted RBP17.25■□□□□ 0.35
PFDN5-220ENST00000628881 NBPF7P0C2Y1 421 aaPredicted RBP17.24■□□□□ 0.35
PFDN5-220ENST00000628881 IARSP41252 1262 aaKnown RBP17.24■□□□□ 0.35
PFDN5-220ENST00000628881 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
PFDN5-220ENST00000628881 DPP8Q6V1X1 898 aaPredicted RBP17.24■□□□□ 0.35
PFDN5-220ENST00000628881 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
PFDN5-220ENST00000628881 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
PFDN5-220ENST00000628881 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
PFDN5-220ENST00000628881 TRIM27P14373 513 aa17.23■□□□□ 0.35
PFDN5-220ENST00000628881 ITGA6P23229 1130 aa17.23■□□□□ 0.35
PFDN5-220ENST00000628881 MPNDQ8N594 471 aa17.23■□□□□ 0.35
PFDN5-220ENST00000628881 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
PFDN5-220ENST00000628881 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
PFDN5-220ENST00000628881 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
PFDN5-220ENST00000628881 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
PFDN5-220ENST00000628881 LTBP1Q14766 1721 aa17.22■□□□□ 0.35
PFDN5-220ENST00000628881 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
PFDN5-220ENST00000628881 EPHA10Q5JZY3 1008 aa17.22■□□□□ 0.35
PFDN5-220ENST00000628881 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
PFDN5-220ENST00000628881 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
PFDN5-220ENST00000628881 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
PFDN5-220ENST00000628881 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
PFDN5-220ENST00000628881 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
PFDN5-220ENST00000628881 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
PFDN5-220ENST00000628881 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
PFDN5-220ENST00000628881 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
PFDN5-220ENST00000628881 CHMP3Q9Y3E7 222 aa17.21■□□□□ 0.35
PFDN5-220ENST00000628881 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
PFDN5-220ENST00000628881 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
PFDN5-220ENST00000628881 GPSM2P81274 684 aa17.2■□□□□ 0.34
PFDN5-220ENST00000628881 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
PFDN5-220ENST00000628881 BSDC1Q9NW68 430 aaPredicted RBP17.2■□□□□ 0.34
PFDN5-220ENST00000628881 NSFL1CQ9UNZ2 370 aaKnown RBP17.2■□□□□ 0.34
PFDN5-220ENST00000628881 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
PFDN5-220ENST00000628881 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
PFDN5-220ENST00000628881 RABL6Q3YEC7 729 aaPredicted RBP17.19■□□□□ 0.34
PFDN5-220ENST00000628881 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
PFDN5-220ENST00000628881 BICC1Q9H694 974 aaKnown RBP17.19■□□□□ 0.34
PFDN5-220ENST00000628881 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
PFDN5-220ENST00000628881 COL4A5P29400 1685 aa17.19■□□□□ 0.34
PFDN5-220ENST00000628881 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
PFDN5-220ENST00000628881 GLTPD2A6NH11 291 aa17.18■□□□□ 0.34
PFDN5-220ENST00000628881 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
PFDN5-220ENST00000628881 AOC3Q16853 763 aa17.18■□□□□ 0.34
PFDN5-220ENST00000628881 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
PFDN5-220ENST00000628881 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
PFDN5-220ENST00000628881 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
PFDN5-220ENST00000628881 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
PFDN5-220ENST00000628881 MPHOSPH8Q99549 860 aa17.18■□□□□ 0.34
PFDN5-220ENST00000628881 XDHP47989 1333 aa17.18■□□□□ 0.34
PFDN5-220ENST00000628881 FZD9O00144 591 aa17.17■□□□□ 0.34
PFDN5-220ENST00000628881 KIAA2012Q0VF49 1180 aa17.17■□□□□ 0.34
PFDN5-220ENST00000628881 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms