RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 LAMB2P55268 1798 aa9.84□□□□□ -0.83
NR1I3-235ENST00000628566 H7C1W4 665 aa9.84□□□□□ -0.83
NR1I3-235ENST00000628566 MS4A1P11836 297 aa9.84□□□□□ -0.83
NR1I3-235ENST00000628566 LMNB1P20700 586 aa9.84□□□□□ -0.83
NR1I3-235ENST00000628566 CTSWP56202 376 aa9.84□□□□□ -0.83
NR1I3-235ENST00000628566 SUPT20HQ8NEM7 779 aa9.84□□□□□ -0.83
NR1I3-235ENST00000628566 FRAT1Q92837 279 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-235ENST00000628566 NOB1Q9ULX3 412 aaKnown RBP9.84□□□□□ -0.83
NR1I3-235ENST00000628566 ABCC4O15439 1325 aa9.83□□□□□ -0.84
NR1I3-235ENST00000628566 LTBP3Q9NS15 1303 aa9.83□□□□□ -0.84
NR1I3-235ENST00000628566 ANKRD18AQ8IVF6 992 aa9.83□□□□□ -0.84
NR1I3-235ENST00000628566 SYNE4Q8N205 404 aa9.83□□□□□ -0.84
NR1I3-235ENST00000628566 ATP6V0A2Q9Y487 856 aa9.83□□□□□ -0.84
NR1I3-235ENST00000628566 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
NR1I3-235ENST00000628566 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
NR1I3-235ENST00000628566 DDX60Q8IY21 1712 aaKnown RBP9.82□□□□□ -0.84
NR1I3-235ENST00000628566 IGHMBP2P38935 993 aaKnown RBP9.82□□□□□ -0.84
NR1I3-235ENST00000628566 RPS8P62241 208 aaKnown RBP9.82□□□□□ -0.84
NR1I3-235ENST00000628566 FKBP4Q02790 459 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-235ENST00000628566 ZKSCAN2Q63HK3 967 aa9.82□□□□□ -0.84
NR1I3-235ENST00000628566 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
NR1I3-235ENST00000628566 FTSJ3Q8IY81 847 aaKnown RBP9.82□□□□□ -0.84
NR1I3-235ENST00000628566 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-235ENST00000628566 PLA2G12BQ9BX93 195 aa9.82□□□□□ -0.84
NR1I3-235ENST00000628566 RNF181Q9P0P0 153 aa9.82□□□□□ -0.84
NR1I3-235ENST00000628566 CHMP3Q9Y3E7 222 aa9.82□□□□□ -0.84
NR1I3-235ENST00000628566 SLX4Q8IY92 1834 aa9.82□□□□□ -0.84
NR1I3-235ENST00000628566 RTL9Q8NET4 1388 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 ANKRD18BA2A2Z9 1011 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 IFIT5Q13325 482 aaKnown RBP9.81□□□□□ -0.84
NR1I3-235ENST00000628566 CCDC57Q2TAC2 916 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 TAF7LQ5H9L4 462 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 C9orf131Q5VYM1 1079 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 DPP8Q6V1X1 898 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-235ENST00000628566 ATF7IPQ6VMQ6 1270 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 C3orf67Q6ZVT6 689 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 MPNDQ8N594 471 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 JDP2Q8WYK2 163 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 JARID2Q92833 1246 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-235ENST00000628566 YTHDC1Q96MU7 727 aaKnown RBP9.81□□□□□ -0.84
NR1I3-235ENST00000628566 PSMD1Q99460 953 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 MPHOSPH8Q99549 860 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 VPS33BQ9H267 617 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 KDM2BQ8NHM5 1336 aa9.81□□□□□ -0.84
NR1I3-235ENST00000628566 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
NR1I3-235ENST00000628566 NFKBIEO00221 500 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 BCAR3O75815 825 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 GNAI3P08754 354 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 UBTFL1P0CB47 393 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-235ENST00000628566 DPY19L2Q6NUT2 758 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 TTLL11Q8NHH1 800 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 CCDC85AQ96PX6 553 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-235ENST00000628566 EYA3Q99504 573 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 MYH3P11055 1940 aa9.8□□□□□ -0.84
NR1I3-235ENST00000628566 G3V3G9 751 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 ITGA6P23229 1130 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 RASSF7Q02833 373 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 CELF1Q92879 486 aaKnown RBP9.79□□□□□ -0.84
NR1I3-235ENST00000628566 CHMP4BQ9H444 224 aaKnown RBP9.79□□□□□ -0.84
NR1I3-235ENST00000628566 ANKIB1Q9P2G1 1089 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 RCAN3Q9UKA8 241 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 NSFL1CQ9UNZ2 370 aaKnown RBP9.79□□□□□ -0.84
NR1I3-235ENST00000628566 UTYO14607 1347 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 FER1L6Q2WGJ9 1857 aa9.79□□□□□ -0.84
NR1I3-235ENST00000628566 CSF1RP07333 972 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 TRIM27P14373 513 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
NR1I3-235ENST00000628566 CASP7P55210 303 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
NR1I3-235ENST00000628566 LMBR1LQ6UX01 489 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 NIM1KQ8IY84 436 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
NR1I3-235ENST00000628566 LARGE2Q8N3Y3 721 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 ANKRD2Q9GZV1 360 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 GREM2Q9H772 168 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 GPBP1L1Q9HC44 474 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-235ENST00000628566 SEC31BQ9NQW1 1179 aa9.78□□□□□ -0.84
NR1I3-235ENST00000628566 BSDC1Q9NW68 430 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-235ENST00000628566 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
NR1I3-235ENST00000628566 PPIP5K2O43314 1243 aa9.77□□□□□ -0.85
NR1I3-235ENST00000628566 NBPF7P0C2Y1 421 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-235ENST00000628566 EIF6P56537 245 aaKnown RBP9.77□□□□□ -0.85
NR1I3-235ENST00000628566 FAM161AQ3B820 660 aa9.77□□□□□ -0.85
NR1I3-235ENST00000628566 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
NR1I3-235ENST00000628566 RTFDC1Q9BY42 306 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-235ENST00000628566 USP44Q9H0E7 712 aa9.77□□□□□ -0.85
NR1I3-235ENST00000628566 ZNF277Q9NRM2 450 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-235ENST00000628566 GGA1Q9UJY5 639 aa9.77□□□□□ -0.85
NR1I3-235ENST00000628566 XDHP47989 1333 aa9.77□□□□□ -0.85
NR1I3-235ENST00000628566 ATP2B4P23634 1241 aa9.76□□□□□ -0.85
NR1I3-235ENST00000628566 KCNJ4P48050 445 aa9.76□□□□□ -0.85
NR1I3-235ENST00000628566 FOXO4P98177 505 aa9.76□□□□□ -0.85
NR1I3-235ENST00000628566 WASHC4Q2M389 1173 aa9.76□□□□□ -0.85
NR1I3-235ENST00000628566 SUCLG2Q96I99 432 aa9.76□□□□□ -0.85
NR1I3-235ENST00000628566 ZC3H12CQ9C0D7 883 aaKnown RBP9.76□□□□□ -0.85
NR1I3-235ENST00000628566 CNNM1Q9NRU3 951 aa9.76□□□□□ -0.85
NR1I3-235ENST00000628566 PODXL2Q9NZ53 605 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms