RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
FOXCUT-201ENST00000628509 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
FOXCUT-201ENST00000628509 CTSWP56202 376 aa12.49□□□□□ -0.41
FOXCUT-201ENST00000628509 KCNQ4P56696 695 aa12.49□□□□□ -0.41
FOXCUT-201ENST00000628509 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
FOXCUT-201ENST00000628509 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
FOXCUT-201ENST00000628509 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
FOXCUT-201ENST00000628509 CIAO1O76071 339 aa12.48□□□□□ -0.41
FOXCUT-201ENST00000628509 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
FOXCUT-201ENST00000628509 RGS3P49796 1198 aa12.48□□□□□ -0.41
FOXCUT-201ENST00000628509 SUSD4Q5VX71 490 aa12.48□□□□□ -0.41
FOXCUT-201ENST00000628509 LNPKQ9C0E8 428 aa12.48□□□□□ -0.41
FOXCUT-201ENST00000628509 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
FOXCUT-201ENST00000628509 RTL9Q8NET4 1388 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 AOX1Q06278 1338 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 ERC2O15083 957 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 CSF1RP07333 972 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 IGHMBP2P38935 993 aaKnown RBP12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 FOXO4P98177 505 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 CASC1Q6TDU7 716 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 CNBD1Q8NA66 436 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 EXOC6BQ9Y2D4 811 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 LAMB2P55268 1798 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 C4AP0C0L4 1744 aa12.47□□□□□ -0.41
FOXCUT-201ENST00000628509 QSER1Q2KHR3 1735 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 NTSR2O95665 410 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 EN1Q05925 392 aaPredicted RBP12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 PROM2Q8N271 834 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.41
FOXCUT-201ENST00000628509 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 APBB1O00213 710 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 TTLL11Q8NHH1 800 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 KAZALD1Q96I82 304 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
FOXCUT-201ENST00000628509 TTC41PQ6P2S7 1318 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 MROH5Q6ZUA9 1318 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 EYA2O00167 538 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 GYS1P13807 737 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 ITGA6P23229 1130 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 SF3B3Q15393 1217 aaKnown RBP12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 LDHAL6AQ6ZMR3 332 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 UPF2Q9HAU5 1272 aaKnown RBP12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 SRP68Q9UHB9 627 aaKnown RBP12.44□□□□□ -0.42
FOXCUT-201ENST00000628509 MX1P20591 662 aa12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 PTPN12Q05209 780 aaKnown RBP12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 NFIXQ14938 502 aa12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 FAM161AQ3B820 660 aa12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 OSBPL3Q9H4L5 887 aa12.43□□□□□ -0.42
FOXCUT-201ENST00000628509 GLRX3O76003 335 aaKnown RBP12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 SERPINB2P05120 415 aa12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 EPHA10Q5JZY3 1008 aa12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 JARID2Q92833 1246 aaPredicted RBP12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 SIL1Q9H173 461 aa12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
FOXCUT-201ENST00000628509 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 TM4SF1P30408 202 aa12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 PDE6BP35913 854 aa12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 RFX5P48382 616 aaPredicted RBP12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 LRRFIP1Q32MZ4 808 aaKnown RBP12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 ERFEQ4G0M1 354 aa12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 AACSQ86V21 672 aa12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 COL23A1Q86Y22 540 aaPredicted RBP12.41□□□□□ -0.42
FOXCUT-201ENST00000628509 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 METTL24Q5JXM2 366 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 GORABQ5T7V8 394 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 RBM17Q96I25 401 aaKnown RBP12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 ANKRD2Q9GZV1 360 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 GREM2Q9H772 168 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 ECHDC1Q9NTX5 307 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 STAP2Q9UGK3 403 aa12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 PA2G4Q9UQ80 394 aaKnown RBP12.4□□□□□ -0.42
FOXCUT-201ENST00000628509 PNPLA7Q6ZV29 1317 aa12.39□□□□□ -0.43
FOXCUT-201ENST00000628509 HIP1O00291 1037 aa12.39□□□□□ -0.43
FOXCUT-201ENST00000628509 PDE1AP54750 535 aa12.39□□□□□ -0.43
FOXCUT-201ENST00000628509 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms