RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 SLC4A1APQ9BWU0 796 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 STK31Q9BXU1 1019 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 USP26Q9BXU7 913 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 IRX2Q9BZI1 471 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 TRIM7Q9C029 511 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 FOXD4L1Q9NU39 408 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 CWC25Q9NXE8 425 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 LMCD1Q9NZU5 365 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.22□□□□□ -2.05
TCF4-264ENST00000628391 DNAI1Q9UI46 699 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 ADAM21Q9UKJ8 722 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 NSFL1CQ9UNZ2 370 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 COG6Q9Y2V7 657 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.22□□□□□ -2.05
TCF4-264ENST00000628391 U3KPZ7 1027 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 RGS12O14924 1447 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 PPIP5K1Q6PFW1 1433 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 YTHDC2Q9H6S0 1430 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 ADGRL3Q9HAR2 1447 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 PDS5BQ9NTI5 1447 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 INO80Q9ULG1 1556 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 CHD2O14647 1828 aaKnown RBP2.21□□□□□ -2.05
TCF4-264ENST00000628391 TTC21BQ7Z4L5 1316 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ADGRL2O95490 1459 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 CFTRP13569 1480 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ABCA6Q8N139 1617 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 RBM47A0AV96 593 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 EME2A4GXA9 379 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 CCDC151A5D8V7 595 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 PSDA5PKW4 1024 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 GOLGA6L9A6NEM1 432 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 GOLGA6L10A6NI86 522 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 H3BQF6 201 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 SMAPO00193 183 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 IPO5O00410 1097 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 MAP2K7O14733 419 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ERLIN1O75477 346 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 TADA3O75528 432 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 BCAR3O75815 825 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 SASH3O75995 380 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 KIAA0754O94854 1291 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 RTN3O95197 1032 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 FMNL1O95466 1100 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 CAVIN2O95810 425 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 OATP04181 439 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 MYL1P05976 194 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 PYGLP06737 847 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 NBPF7P0C2Y1 421 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 PYGBP11216 843 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 EZRP15311 586 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 FERP16591 822 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 NAT1P18440 290 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 PAX3P23760 479 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 YY1P25490 414 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 TPP2P29144 1249 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 ALDH1B1P30837 517 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 INPP5BP32019 993 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 SLC8A1P32418 973 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 PEX19P40855 299 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ARHGAP25P42331 645 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 GCLCP48506 637 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 LIG3P49916 1009 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 DAPK1P53355 1430 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 GSDMDP57764 484 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 UBE2HP62256 183 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ROR2Q01974 943 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 NEXNQ0ZGT2 675 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 NUP160Q12769 1436 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 LRMPQ12912 555 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 IFT88Q13099 833 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 PRPF4BQ13523 1007 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 SNW1Q13573 536 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 PKP1Q13835 747 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 BRD3Q15059 726 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 DBN1Q16643 649 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ERCC6LQ2NKX8 1250 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 TSNAXIP1Q2TAA8 658 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 FAM135BQ49AJ0 1406 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 CCDC38Q502W7 563 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 PLEKHO1Q53GL0 409 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 HSP90AB2PQ58FF8 381 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 CCDC178Q5BJE1 867 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 RRP12Q5JTH9 1297 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 CEP85LQ5SZL2 805 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 FBXW10Q5XX13 1052 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 KLHL10Q6JEL2 608 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ZNF280DQ6N043 979 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 SARM1Q6SZW1 724 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 MICALCLQ6ZW33 695 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ARHGAP22Q7Z5H3 698 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 YTHDF3Q7Z739 585 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 PLA2G4DQ86XP0 818 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 APLFQ8IW19 511 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 CCAR2Q8N163 923 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 NME8Q8N427 588 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 GPR161Q8N6U8 529 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 SPC24Q8NBT2 197 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 CCDC150Q8NCX0 1101 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 CNNM3Q8NE01 707 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 HELBQ8NG08 1087 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms