RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 FOXO4P98177 505 aa23.65■■□□□ 1.38
MECP2-216ENST00000627864 SF3B3Q15393 1217 aaKnown RBP23.65■■□□□ 1.38
MECP2-216ENST00000627864 CRY2Q49AN0 593 aa23.65■■□□□ 1.38
MECP2-216ENST00000627864 EPHA10Q5JZY3 1008 aa23.65■■□□□ 1.38
MECP2-216ENST00000627864 CCDC85AQ96PX6 553 aaPredicted RBP23.65■■□□□ 1.38
MECP2-216ENST00000627864 HDAC5Q9UQL6 1122 aa23.65■■□□□ 1.38
MECP2-216ENST00000627864 SPEF2Q9C093 1822 aa23.64■■□□□ 1.38
MECP2-216ENST00000627864 NPR1P16066 1061 aa23.64■■□□□ 1.37
MECP2-216ENST00000627864 TTLL11Q8NHH1 800 aa23.64■■□□□ 1.37
MECP2-216ENST00000627864 MASTLQ96GX5 879 aa23.64■■□□□ 1.37
MECP2-216ENST00000627864 KAZALD1Q96I82 304 aa23.64■■□□□ 1.37
MECP2-216ENST00000627864 LRRFIP2Q9Y608 721 aaKnown RBP23.64■■□□□ 1.37
MECP2-216ENST00000627864 KCNA3P22001 575 aa23.63■■□□□ 1.37
MECP2-216ENST00000627864 CCDC152Q4G0S7 254 aa23.63■■□□□ 1.37
MECP2-216ENST00000627864 STYK1Q6J9G0 422 aa23.63■■□□□ 1.37
MECP2-216ENST00000627864 RBM17Q96I25 401 aaKnown RBP23.63■■□□□ 1.37
MECP2-216ENST00000627864 BICC1Q9H694 974 aaKnown RBP23.63■■□□□ 1.37
MECP2-216ENST00000627864 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
MECP2-216ENST00000627864 LMBR1LQ6UX01 489 aa23.62■■□□□ 1.37
MECP2-216ENST00000627864 DDX46Q7L014 1031 aaKnown RBP23.62■■□□□ 1.37
MECP2-216ENST00000627864 PIM2Q9P1W9 311 aa23.62■■□□□ 1.37
MECP2-216ENST00000627864 WWC3Q9ULE0 1092 aa23.62■■□□□ 1.37
MECP2-216ENST00000627864 CHMP3Q9Y3E7 222 aa23.62■■□□□ 1.37
MECP2-216ENST00000627864 GNAI2P04899 355 aa23.61■■□□□ 1.37
MECP2-216ENST00000627864 CSF1RP07333 972 aa23.61■■□□□ 1.37
MECP2-216ENST00000627864 CRBNQ96SW2 442 aa23.61■■□□□ 1.37
MECP2-216ENST00000627864 CHMP4BQ9H444 224 aaKnown RBP23.61■■□□□ 1.37
MECP2-216ENST00000627864 HOXA10P31260 410 aaPredicted RBP23.6■■□□□ 1.37
MECP2-216ENST00000627864 ANKRD44Q8N8A2 993 aa23.6■■□□□ 1.37
MECP2-216ENST00000627864 CRAMP1Q96RY5 1269 aa23.6■■□□□ 1.37
MECP2-216ENST00000627864 GREM2Q9H772 168 aa23.6■■□□□ 1.37
MECP2-216ENST00000627864 ALDH1B1P30837 517 aa23.59■■□□□ 1.37
MECP2-216ENST00000627864 CNKSR1Q969H4 720 aa23.59■■□□□ 1.37
MECP2-216ENST00000627864 C1orf115Q9H7X2 142 aa23.59■■□□□ 1.37
MECP2-216ENST00000627864 SEC31BQ9NQW1 1179 aa23.59■■□□□ 1.37
MECP2-216ENST00000627864 IRX6P78412 446 aaPredicted RBP23.58■■□□□ 1.37
MECP2-216ENST00000627864 FAM161AQ3B820 660 aa23.58■■□□□ 1.37
MECP2-216ENST00000627864 TTLL6Q8N841 843 aa23.58■■□□□ 1.37
MECP2-216ENST00000627864 ARFGEF1Q9Y6D6 1849 aa23.58■■□□□ 1.37
MECP2-216ENST00000627864 RABL6Q3YEC7 729 aaPredicted RBP23.57■■□□□ 1.36
MECP2-216ENST00000627864 ZBTB40Q9NUA8 1239 aa23.57■■□□□ 1.36
MECP2-216ENST00000627864 RTL9Q8NET4 1388 aa23.56■■□□□ 1.36
MECP2-216ENST00000627864 ITGA6P23229 1130 aa23.56■■□□□ 1.36
MECP2-216ENST00000627864 DALRD3Q5D0E6 543 aaKnown RBP23.56■■□□□ 1.36
MECP2-216ENST00000627864 COL4A1P02462 1669 aa23.56■■□□□ 1.36
MECP2-216ENST00000627864 ANKRD18BA2A2Z9 1011 aa23.55■■□□□ 1.36
MECP2-216ENST00000627864 IFIT5Q13325 482 aaKnown RBP23.55■■□□□ 1.36
MECP2-216ENST00000627864 GRAPQ13588 217 aa23.55■■□□□ 1.36
MECP2-216ENST00000627864 CCDC57Q2TAC2 916 aa23.55■■□□□ 1.36
MECP2-216ENST00000627864 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
MECP2-216ENST00000627864 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
MECP2-216ENST00000627864 CELF1Q92879 486 aaKnown RBP23.55■■□□□ 1.36
MECP2-216ENST00000627864 ZNF219Q9P2Y4 722 aaPredicted RBP23.55■■□□□ 1.36
MECP2-216ENST00000627864 BCS1LQ9Y276 419 aa23.55■■□□□ 1.36
MECP2-216ENST00000627864 PRPF40BQ6NWY9 871 aaKnown RBP23.54■■□□□ 1.36
MECP2-216ENST00000627864 CDC5LQ99459 802 aaKnown RBP23.54■■□□□ 1.36
MECP2-216ENST00000627864 RPS8P62241 208 aaKnown RBP23.53■■□□□ 1.36
MECP2-216ENST00000627864 ANKRD18AQ8IVF6 992 aa23.53■■□□□ 1.36
MECP2-216ENST00000627864 PPEF1O14829 653 aaPredicted RBP23.52■■□□□ 1.36
MECP2-216ENST00000627864 BBOX1O75936 387 aa23.52■■□□□ 1.36
MECP2-216ENST00000627864 TAF7LQ5H9L4 462 aa23.52■■□□□ 1.36
MECP2-216ENST00000627864 EXOC6Q8TAG9 804 aa23.52■■□□□ 1.36
MECP2-216ENST00000627864 ZNF594Q96JF6 807 aaPredicted RBP23.52■■□□□ 1.36
MECP2-216ENST00000627864 SRGAP3O43295 1099 aa23.5■■□□□ 1.35
MECP2-216ENST00000627864 C21orf2O43822 256 aa23.5■■□□□ 1.35
MECP2-216ENST00000627864 IGHMBP2P38935 993 aaKnown RBP23.5■■□□□ 1.35
MECP2-216ENST00000627864 ATP8B2P98198 1209 aa23.5■■□□□ 1.35
MECP2-216ENST00000627864 MTX1Q13505 466 aa23.5■■□□□ 1.35
MECP2-216ENST00000627864 GPR162Q16538 588 aa23.49■■□□□ 1.35
MECP2-216ENST00000627864 PNMA6EA0A0J9YXQ4 647 aa23.48■■□□□ 1.35
MECP2-216ENST00000627864 RFX5P48382 616 aaPredicted RBP23.48■■□□□ 1.35
MECP2-216ENST00000627864 CEP85Q6P2H3 762 aa23.48■■□□□ 1.35
MECP2-216ENST00000627864 TMC4Q7Z404 712 aa23.48■■□□□ 1.35
MECP2-216ENST00000627864 KLHDC4Q8TBB5 520 aa23.48■■□□□ 1.35
MECP2-216ENST00000627864 MPHOSPH8Q99549 860 aa23.48■■□□□ 1.35
MECP2-216ENST00000627864 LRRC37AA6NMS7 1700 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 CCDC88AQ3V6T2 1871 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 YBX3P16989 372 aaKnown RBP eCLIP23.47■■□□□ 1.35
MECP2-216ENST00000627864 OLFM4Q6UX06 510 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 SLC51AQ86UW1 340 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 SP8Q8IXZ3 490 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 C7orf43Q8WVR3 580 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 TMX4Q9H1E5 349 aaPredicted RBP23.47■■□□□ 1.35
MECP2-216ENST00000627864 ATP6V0A2Q9Y487 856 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 FER1L6Q2WGJ9 1857 aa23.47■■□□□ 1.35
MECP2-216ENST00000627864 A0A1B0GUL6 1792 aa23.46■■□□□ 1.35
MECP2-216ENST00000627864 LDHAL6AQ6ZMR3 332 aa23.46■■□□□ 1.35
MECP2-216ENST00000627864 RPAP2Q8IXW5 612 aaPredicted RBP23.46■■□□□ 1.35
MECP2-216ENST00000627864 BSDC1Q9NW68 430 aaPredicted RBP23.46■■□□□ 1.35
MECP2-216ENST00000627864 CNNM1Q9NRU3 951 aa23.45■■□□□ 1.34
MECP2-216ENST00000627864 PTPN12Q05209 780 aaKnown RBP23.44■■□□□ 1.34
MECP2-216ENST00000627864 POLA2Q14181 598 aa23.44■■□□□ 1.34
MECP2-216ENST00000627864 SSH3Q8TE77 659 aa23.44■■□□□ 1.34
MECP2-216ENST00000627864 PUS3Q9BZE2 481 aaKnown RBP23.44■■□□□ 1.34
MECP2-216ENST00000627864 PA2G4Q9UQ80 394 aaKnown RBP23.44■■□□□ 1.34
MECP2-216ENST00000627864 AAMPQ13685 434 aa23.43■■□□□ 1.34
MECP2-216ENST00000627864 CCDC93Q567U6 631 aa23.43■■□□□ 1.34
MECP2-216ENST00000627864 SOGA3Q5TF21 947 aa23.43■■□□□ 1.34
MECP2-216ENST00000627864 CC2D2BQ6DHV5 1058 aa23.43■■□□□ 1.34
MECP2-216ENST00000627864 SIL1Q9H173 461 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms