RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ATP5J2-PTCD1G3V325 749 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 GRM8O00222 908 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 HMMRO75330 724 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 IL6STP40189 918 aaPredicted RBP12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 DCTPP1Q9H773 170 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 NUP188Q5SRE5 1749 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 BTAF1O14981 1849 aa12.39□□□□□ -0.43
SOX2-OT-244ENST00000627738 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-244ENST00000627738 CRKLP46109 303 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-244ENST00000627738 GCKRQ14397 625 aa12.38□□□□□ -0.43
SOX2-OT-244ENST00000627738 ARXQ96QS3 562 aa12.38□□□□□ -0.43
SOX2-OT-244ENST00000627738 BRWD3Q6RI45 1802 aa12.38□□□□□ -0.43
SOX2-OT-244ENST00000627738 SBF2Q86WG5 1849 aa12.38□□□□□ -0.43
SOX2-OT-244ENST00000627738 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-244ENST00000627738 UTYO14607 1347 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 NUCB1Q02818 461 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 ANKRD45Q5TZF3 282 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 FAM196AQ6ZSG2 479 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 NPM2Q86SE8 214 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 LINC00116Q8NCU8 138 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 HDAC5Q9UQL6 1122 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 MAP3K15Q6ZN16 1313 aa12.37□□□□□ -0.43
SOX2-OT-244ENST00000627738 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 RXRBP28702 533 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 KCNQ4P56696 695 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 TCIRG1Q13488 830 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 DSG2Q14126 1118 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 CHD1LQ86WJ1 897 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 SUCLG2Q96I99 432 aa12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 AFDNP55196 1824 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-244ENST00000627738 RREB1Q92766 1687 aa12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 HLFQ16534 295 aa12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 SSH3Q8TE77 659 aa12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 CWC25Q9NXE8 425 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
SOX2-OT-244ENST00000627738 A0A087WZG4 1122 aa12.34□□□□□ -0.43
SOX2-OT-244ENST00000627738 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
SOX2-OT-244ENST00000627738 SRGAP3O43295 1099 aa12.34□□□□□ -0.43
SOX2-OT-244ENST00000627738 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
SOX2-OT-244ENST00000627738 CCDC191Q8NCU4 936 aa12.34□□□□□ -0.43
SOX2-OT-244ENST00000627738 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
SOX2-OT-244ENST00000627738 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
SOX2-OT-244ENST00000627738 ERVV-1B6SEH8 477 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 H7C1W4 665 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 TRIM37O94972 964 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 CASP7P55210 303 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 MTX1Q13505 466 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 HSP90AB3PQ58FF7 597 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 UBE3BQ7Z3V4 1068 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 BICC1Q9H694 974 aaKnown RBP12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 EXOC6BQ9Y2D4 811 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 CNTNAP4Q9C0A0 1308 aa12.33□□□□□ -0.44
SOX2-OT-244ENST00000627738 LY75O60449 1722 aa12.32□□□□□ -0.44
SOX2-OT-244ENST00000627738 APBB1O00213 710 aa12.32□□□□□ -0.44
SOX2-OT-244ENST00000627738 SEMA3EO15041 775 aa12.32□□□□□ -0.44
SOX2-OT-244ENST00000627738 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
SOX2-OT-244ENST00000627738 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
SOX2-OT-244ENST00000627738 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
SOX2-OT-244ENST00000627738 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
SOX2-OT-244ENST00000627738 COL15A1P39059 1388 aa12.31□□□□□ -0.44
SOX2-OT-244ENST00000627738 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-244ENST00000627738 GPTP24298 496 aa12.31□□□□□ -0.44
SOX2-OT-244ENST00000627738 FOXK1P85037 733 aa12.31□□□□□ -0.44
SOX2-OT-244ENST00000627738 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-244ENST00000627738 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-244ENST00000627738 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
SOX2-OT-244ENST00000627738 SURF6O75683 361 aaKnown RBP12.3□□□□□ -0.44
SOX2-OT-244ENST00000627738 CAMTA2O94983 1202 aa12.3□□□□□ -0.44
SOX2-OT-244ENST00000627738 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
SOX2-OT-244ENST00000627738 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
SOX2-OT-244ENST00000627738 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
SOX2-OT-244ENST00000627738 RPS6KA4O75676 772 aa12.29□□□□□ -0.44
SOX2-OT-244ENST00000627738 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
SOX2-OT-244ENST00000627738 C16orf71Q8IYS4 520 aaPredicted RBP12.29□□□□□ -0.44
SOX2-OT-244ENST00000627738 ZNF34Q8IZ26 560 aa12.29□□□□□ -0.44
SOX2-OT-244ENST00000627738 NUP98P52948 1817 aa12.29□□□□□ -0.44
SOX2-OT-244ENST00000627738 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 GNPATO15228 680 aa12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 FOXO4P98177 505 aa12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 FAM161AQ3B820 660 aa12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 SMIM5Q71RC9 77 aa12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 ZBTB38Q8NAP3 1195 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-244ENST00000627738 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms