RNA–Protein interactions for RNA: ENST00000627144.2

SMIM7-221, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene SMIM7, Length 2,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-221ENST00000627144 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-221ENST00000627144 PTPN12Q05209 780 aaKnown RBP12.35□□□□□ -0.43
SMIM7-221ENST00000627144 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
SMIM7-221ENST00000627144 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
SMIM7-221ENST00000627144 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-221ENST00000627144 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-221ENST00000627144 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
SMIM7-221ENST00000627144 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
SMIM7-221ENST00000627144 RBM8AQ9Y5S9 174 aaKnown RBP12.35□□□□□ -0.43
SMIM7-221ENST00000627144 CYP46A1Q9Y6A2 500 aa12.35□□□□□ -0.43
SMIM7-221ENST00000627144 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 CLCN1P35523 988 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 CASP7P55210 303 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 BARGINQ6ZT62 677 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 UBE3BQ7Z3V4 1068 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 SH2B1Q9NRF2 756 aaPredicted RBP12.34□□□□□ -0.43
SMIM7-221ENST00000627144 PDRG1Q9NUG6 133 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
SMIM7-221ENST00000627144 A0A087WZG4 1122 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 DDB1Q16531 1140 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 NSFL1CQ9UNZ2 370 aaKnown RBP12.33□□□□□ -0.44
SMIM7-221ENST00000627144 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 ZSCAN22P10073 491 aaPredicted RBP12.33□□□□□ -0.44
SMIM7-221ENST00000627144 CPA1P15085 419 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 ATP5JP18859 108 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
SMIM7-221ENST00000627144 TNNI3KQ59H18 835 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 FPGT-TNNI3KV9GXZ4 949 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 NUP188Q5SRE5 1749 aa12.33□□□□□ -0.44
SMIM7-221ENST00000627144 ESPNB1AK53 854 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 STX6O43752 255 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 PSMA5P28066 241 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 KCNJ4P48050 445 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 CDCA7Q9BWT1 371 aaPredicted RBP12.32□□□□□ -0.44
SMIM7-221ENST00000627144 DBNLQ9UJU6 430 aaKnown RBP12.32□□□□□ -0.44
SMIM7-221ENST00000627144 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 NBPF26B4DH59 902 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 SLC27A2O14975 620 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 PTCD1O75127 700 aaKnown RBP12.32□□□□□ -0.44
SMIM7-221ENST00000627144 LARGE1O95461 756 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 SYT1P21579 422 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 TFCP2Q12800 502 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 RNF20Q5VTR2 975 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
SMIM7-221ENST00000627144 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 FBXO41Q8TF61 875 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
SMIM7-221ENST00000627144 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
SMIM7-221ENST00000627144 RBSNQ9H1K0 784 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
SMIM7-221ENST00000627144 SYCE3A1L190 88 aa12.31□□□□□ -0.44
SMIM7-221ENST00000627144 H7C1W4 665 aa12.31□□□□□ -0.44
SMIM7-221ENST00000627144 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
SMIM7-221ENST00000627144 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
SMIM7-221ENST00000627144 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
SMIM7-221ENST00000627144 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
SMIM7-221ENST00000627144 HMG20BQ9P0W2 317 aa12.31□□□□□ -0.44
SMIM7-221ENST00000627144 ATP6V1DQ9Y5K8 247 aa12.31□□□□□ -0.44
SMIM7-221ENST00000627144 TSGA10IPQ3SY00 556 aa12.3□□□□□ -0.44
SMIM7-221ENST00000627144 USP48Q86UV5 1035 aa12.3□□□□□ -0.44
SMIM7-221ENST00000627144 ALDH8A1Q9H2A2 487 aaPredicted RBP12.3□□□□□ -0.44
SMIM7-221ENST00000627144 QTRT2Q9H974 415 aaKnown RBP12.3□□□□□ -0.44
SMIM7-221ENST00000627144 TJP1Q07157 1748 aa12.3□□□□□ -0.44
SMIM7-221ENST00000627144 TNS2Q63HR2 1409 aa12.3□□□□□ -0.44
SMIM7-221ENST00000627144 F13A1P00488 732 aa12.3□□□□□ -0.44
SMIM7-221ENST00000627144 CCDC83Q8IWF9 413 aa12.3□□□□□ -0.44
SMIM7-221ENST00000627144 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 GJB2P29033 226 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 RBM10P98175 930 aaKnown RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 FOXO4P98177 505 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 ANKRD1Q15327 319 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 ME3Q16798 604 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 USPL1Q5W0Q7 1092 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 ZNF589Q86UQ0 364 aaPredicted RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 TRPC5Q9UL62 973 aaPredicted RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 TCHHQ07283 1943 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 A0A0G2JS52 829 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 PHF14O94880 888 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 ST3GAL1Q11201 340 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 FOXD4L6Q3SYB3 417 aaPredicted RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 FOXD4L3Q6VB84 417 aaPredicted RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 HAUS7Q99871 368 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
SMIM7-221ENST00000627144 GDPD2Q9HCC8 539 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 EP400Q96L91 3159 aa12.29□□□□□ -0.44
SMIM7-221ENST00000627144 GADD45BO75293 160 aaPredicted RBP12.28□□□□□ -0.44
SMIM7-221ENST00000627144 TAF5LO75529 589 aa12.28□□□□□ -0.44
SMIM7-221ENST00000627144 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
SMIM7-221ENST00000627144 BLOC1S2Q6QNY1 142 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms