RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 CSF1RP07333 972 aa20.76■□□□□ 0.91
CCNA1-203ENST00000625767 KIF13BQ9NQT8 1826 aa20.76■□□□□ 0.91
CCNA1-203ENST00000625767 CACNA1SQ13698 1873 aa20.75■□□□□ 0.91
CCNA1-203ENST00000625767 SRGAP3O43295 1099 aa20.75■□□□□ 0.91
CCNA1-203ENST00000625767 IGHDP01880 384 aa20.75■□□□□ 0.91
CCNA1-203ENST00000625767 ATP8B2P98198 1209 aa20.75■□□□□ 0.91
CCNA1-203ENST00000625767 SEC31BQ9NQW1 1179 aa20.75■□□□□ 0.91
CCNA1-203ENST00000625767 C10orf71Q711Q0 1435 aa20.75■□□□□ 0.91
CCNA1-203ENST00000625767 UTRNP46939 3433 aa20.75■□□□□ 0.91
CCNA1-203ENST00000625767 MTX1Q13505 466 aa20.74■□□□□ 0.91
CCNA1-203ENST00000625767 B4GALNT3Q6L9W6 998 aa20.74■□□□□ 0.91
CCNA1-203ENST00000625767 RIC1Q4ADV7 1423 aa20.74■□□□□ 0.91
CCNA1-203ENST00000625767 POLD1P28340 1107 aa20.73■□□□□ 0.91
CCNA1-203ENST00000625767 AAMPQ13685 434 aa20.73■□□□□ 0.91
CCNA1-203ENST00000625767 ZNF594Q96JF6 807 aaPredicted RBP20.73■□□□□ 0.91
CCNA1-203ENST00000625767 NLRP3Q96P20 1036 aa20.73■□□□□ 0.91
CCNA1-203ENST00000625767 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
CCNA1-203ENST00000625767 RFX5P48382 616 aaPredicted RBP20.73■□□□□ 0.91
CCNA1-203ENST00000625767 RPAP2Q8IXW5 612 aaPredicted RBP20.73■□□□□ 0.91
CCNA1-203ENST00000625767 KIAA1551Q9HCM1 1747 aa20.73■□□□□ 0.91
CCNA1-203ENST00000625767 POLA2Q14181 598 aa20.72■□□□□ 0.91
CCNA1-203ENST00000625767 SF3B3Q15393 1217 aaKnown RBP20.72■□□□□ 0.91
CCNA1-203ENST00000625767 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
CCNA1-203ENST00000625767 SSH3Q8TE77 659 aa20.72■□□□□ 0.91
CCNA1-203ENST00000625767 BRIP1Q9BX63 1249 aa20.72■□□□□ 0.91
CCNA1-203ENST00000625767 ITGA6P23229 1130 aa20.71■□□□□ 0.91
CCNA1-203ENST00000625767 SPON1Q9HCB6 807 aa20.71■□□□□ 0.91
CCNA1-203ENST00000625767 HDAC5Q9UQL6 1122 aa20.71■□□□□ 0.91
CCNA1-203ENST00000625767 CRY2Q49AN0 593 aa20.7■□□□□ 0.91
CCNA1-203ENST00000625767 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.91
CCNA1-203ENST00000625767 CHRNA5P30532 468 aa20.7■□□□□ 0.9
CCNA1-203ENST00000625767 PTPN12Q05209 780 aaKnown RBP20.7■□□□□ 0.9
CCNA1-203ENST00000625767 CCDC152Q4G0S7 254 aa20.7■□□□□ 0.9
CCNA1-203ENST00000625767 PPP4R2Q9NY27 417 aa20.7■□□□□ 0.9
CCNA1-203ENST00000625767 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
CCNA1-203ENST00000625767 SIL1Q9H173 461 aa20.69■□□□□ 0.9
CCNA1-203ENST00000625767 DLEC1Q9Y238 1755 aa20.68■□□□□ 0.9
CCNA1-203ENST00000625767 IFIT5Q13325 482 aaKnown RBP20.68■□□□□ 0.9
CCNA1-203ENST00000625767 HDAC1Q13547 482 aaPredicted RBP20.68■□□□□ 0.9
CCNA1-203ENST00000625767 CCDC57Q2TAC2 916 aa20.68■□□□□ 0.9
CCNA1-203ENST00000625767 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
CCNA1-203ENST00000625767 CELF1Q92879 486 aaKnown RBP20.68■□□□□ 0.9
CCNA1-203ENST00000625767 CCDC136Q96JN2 1154 aa20.68■□□□□ 0.9
CCNA1-203ENST00000625767 PPP1R1BQ9UD71 204 aaPredicted RBP20.68■□□□□ 0.9
CCNA1-203ENST00000625767 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
CCNA1-203ENST00000625767 PUS3Q9BZE2 481 aaKnown RBP20.67■□□□□ 0.9
CCNA1-203ENST00000625767 EXOC6BQ9Y2D4 811 aa20.67■□□□□ 0.9
CCNA1-203ENST00000625767 LRP5O75197 1615 aa20.67■□□□□ 0.9
CCNA1-203ENST00000625767 RTL9Q8NET4 1388 aa20.67■□□□□ 0.9
CCNA1-203ENST00000625767 SRGNP10124 158 aa20.67■□□□□ 0.9
CCNA1-203ENST00000625767 PDE6BP35913 854 aa20.67■□□□□ 0.9
CCNA1-203ENST00000625767 ANKRD18BA2A2Z9 1011 aa20.66■□□□□ 0.9
CCNA1-203ENST00000625767 LRRC24Q50LG9 513 aa20.66■□□□□ 0.9
CCNA1-203ENST00000625767 C2CD5Q86YS7 1000 aa20.66■□□□□ 0.9
CCNA1-203ENST00000625767 RPGRQ92834 1020 aaKnown RBP20.66■□□□□ 0.9
CCNA1-203ENST00000625767 A0A1B0GUL6 1792 aa20.65■□□□□ 0.9
CCNA1-203ENST00000625767 HMMRO75330 724 aa20.65■□□□□ 0.9
CCNA1-203ENST00000625767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.65■□□□□ 0.9
CCNA1-203ENST00000625767 SLX4Q8IY92 1834 aa20.65■□□□□ 0.9
CCNA1-203ENST00000625767 A0A0G2JLW4 131 aa20.64■□□□□ 0.9
CCNA1-203ENST00000625767 APBB1O00213 710 aa20.64■□□□□ 0.9
CCNA1-203ENST00000625767 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.9
CCNA1-203ENST00000625767 RWDD1Q9H446 243 aaPredicted RBP20.64■□□□□ 0.9
CCNA1-203ENST00000625767 COPRSQ9NQ92 184 aa20.64■□□□□ 0.9
CCNA1-203ENST00000625767 WWC3Q9ULE0 1092 aa20.64■□□□□ 0.9
CCNA1-203ENST00000625767 KDM2BQ8NHM5 1336 aa20.64■□□□□ 0.89
CCNA1-203ENST00000625767 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.89
CCNA1-203ENST00000625767 SURF6O75683 361 aaKnown RBP20.64■□□□□ 0.89
CCNA1-203ENST00000625767 TAF7LQ5H9L4 462 aa20.64■□□□□ 0.89
CCNA1-203ENST00000625767 DPEP1P16444 411 aa20.63■□□□□ 0.89
CCNA1-203ENST00000625767 ZNF622Q969S3 477 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCNA1-203ENST00000625767 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
CCNA1-203ENST00000625767 H0YIN7 160 aa20.62■□□□□ 0.89
CCNA1-203ENST00000625767 KCNA3P22001 575 aa20.62■□□□□ 0.89
CCNA1-203ENST00000625767 HOXA10P31260 410 aaPredicted RBP20.62■□□□□ 0.89
CCNA1-203ENST00000625767 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
CCNA1-203ENST00000625767 NLGN2Q8NFZ4 835 aa20.62■□□□□ 0.89
CCNA1-203ENST00000625767 BCL11AQ9H165 835 aa20.62■□□□□ 0.89
CCNA1-203ENST00000625767 NPR1P16066 1061 aa20.61■□□□□ 0.89
CCNA1-203ENST00000625767 GRAPQ13588 217 aa20.61■□□□□ 0.89
CCNA1-203ENST00000625767 GRAPLQ8TC17 118 aaPredicted RBP20.61■□□□□ 0.89
CCNA1-203ENST00000625767 MASTLQ96GX5 879 aa20.61■□□□□ 0.89
CCNA1-203ENST00000625767 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
CCNA1-203ENST00000625767 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
CCNA1-203ENST00000625767 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
CCNA1-203ENST00000625767 CDC5LQ99459 802 aaKnown RBP20.61■□□□□ 0.89
CCNA1-203ENST00000625767 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
CCNA1-203ENST00000625767 EYA2O00167 538 aa20.6■□□□□ 0.89
CCNA1-203ENST00000625767 SMARCA5O60264 1052 aaPredicted RBP20.6■□□□□ 0.89
CCNA1-203ENST00000625767 SASH1O94885 1247 aa20.6■□□□□ 0.89
CCNA1-203ENST00000625767 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
CCNA1-203ENST00000625767 OLFM4Q6UX06 510 aa20.6■□□□□ 0.89
CCNA1-203ENST00000625767 SKAP1Q86WV1 359 aa20.6■□□□□ 0.89
CCNA1-203ENST00000625767 SMC5Q8IY18 1101 aa20.6■□□□□ 0.89
CCNA1-203ENST00000625767 CRAMP1Q96RY5 1269 aa20.59■□□□□ 0.89
CCNA1-203ENST00000625767 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
CCNA1-203ENST00000625767 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
CCNA1-203ENST00000625767 RIPOR2Q9Y4F9 1068 aa20.59■□□□□ 0.89
CCNA1-203ENST00000625767 IGHMBP2P38935 993 aaKnown RBP20.58■□□□□ 0.89
CCNA1-203ENST00000625767 OS9Q13438 667 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms