RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 RFC4P35249 363 aa14.53□□□□□ -0.08
LINC00963-220ENST00000625171 G3BP1Q13283 466 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC00963-220ENST00000625171 BMP2KLQ5H9B9 411 aa14.53□□□□□ -0.08
LINC00963-220ENST00000625171 TTLL11Q8NHH1 800 aa14.53□□□□□ -0.08
LINC00963-220ENST00000625171 NYXQ9GZU5 481 aa14.53□□□□□ -0.08
LINC00963-220ENST00000625171 EXOC6BQ9Y2D4 811 aa14.53□□□□□ -0.08
LINC00963-220ENST00000625171 CEP350Q5VT06 3117 aa14.52□□□□□ -0.08
LINC00963-220ENST00000625171 SCN7AQ01118 1682 aa14.52□□□□□ -0.08
LINC00963-220ENST00000625171 RGS3P49796 1198 aa14.52□□□□□ -0.09
LINC00963-220ENST00000625171 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.09
LINC00963-220ENST00000625171 GPR108Q9NPR9 543 aa14.52□□□□□ -0.09
LINC00963-220ENST00000625171 UBR3Q6ZT12 1888 aa14.51□□□□□ -0.09
LINC00963-220ENST00000625171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
LINC00963-220ENST00000625171 CTSWP56202 376 aa14.51□□□□□ -0.09
LINC00963-220ENST00000625171 SF3B3Q15393 1217 aaKnown RBP14.51□□□□□ -0.09
LINC00963-220ENST00000625171 FAM161AQ3B820 660 aa14.51□□□□□ -0.09
LINC00963-220ENST00000625171 AMIGO3Q86WK7 504 aa14.51□□□□□ -0.09
LINC00963-220ENST00000625171 SETDB2Q96T68 719 aa14.51□□□□□ -0.09
LINC00963-220ENST00000625171 BACH2Q9BYV9 841 aa14.51□□□□□ -0.09
LINC00963-220ENST00000625171 PNPLA7Q6ZV29 1317 aa14.5□□□□□ -0.09
LINC00963-220ENST00000625171 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
LINC00963-220ENST00000625171 SASH1O94885 1247 aa14.5□□□□□ -0.09
LINC00963-220ENST00000625171 IL15P40933 162 aaPredicted RBP14.5□□□□□ -0.09
LINC00963-220ENST00000625171 CCDC57Q2TAC2 916 aa14.5□□□□□ -0.09
LINC00963-220ENST00000625171 TBC1D9BQ66K14 1250 aa14.5□□□□□ -0.09
LINC00963-220ENST00000625171 TPTE2Q6XPS3 522 aa14.5□□□□□ -0.09
LINC00963-220ENST00000625171 SKAP1Q86WV1 359 aa14.5□□□□□ -0.09
LINC00963-220ENST00000625171 CLASRPQ8N2M8 674 aaKnown RBP14.5□□□□□ -0.09
LINC00963-220ENST00000625171 JARID2Q92833 1246 aaPredicted RBP14.5□□□□□ -0.09
LINC00963-220ENST00000625171 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
LINC00963-220ENST00000625171 GYS1P13807 737 aa14.49□□□□□ -0.09
LINC00963-220ENST00000625171 TM4SF1P30408 202 aa14.49□□□□□ -0.09
LINC00963-220ENST00000625171 PDE1AP54750 535 aa14.49□□□□□ -0.09
LINC00963-220ENST00000625171 IFIT5Q13325 482 aaKnown RBP14.49□□□□□ -0.09
LINC00963-220ENST00000625171 TFCP2L1Q9NZI6 479 aa14.49□□□□□ -0.09
LINC00963-220ENST00000625171 TTC41PQ6P2S7 1318 aa14.48□□□□□ -0.09
LINC00963-220ENST00000625171 EYA2O00167 538 aa14.48□□□□□ -0.09
LINC00963-220ENST00000625171 ATG9AQ7Z3C6 839 aa14.48□□□□□ -0.09
LINC00963-220ENST00000625171 SRP68Q9UHB9 627 aaKnown RBP14.48□□□□□ -0.09
LINC00963-220ENST00000625171 PA2G4Q9UQ80 394 aaKnown RBP14.48□□□□□ -0.09
LINC00963-220ENST00000625171 SMARCA5O60264 1052 aaPredicted RBP14.47□□□□□ -0.09
LINC00963-220ENST00000625171 EIF5BO60841 1220 aaKnown RBP14.47□□□□□ -0.09
LINC00963-220ENST00000625171 C8orf34Q49A92 452 aa14.47□□□□□ -0.09
LINC00963-220ENST00000625171 CCDC152Q4G0S7 254 aa14.47□□□□□ -0.09
LINC00963-220ENST00000625171 C16orf71Q8IYS4 520 aaPredicted RBP14.47□□□□□ -0.09
LINC00963-220ENST00000625171 SYNE4Q8N205 404 aa14.47□□□□□ -0.09
LINC00963-220ENST00000625171 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
LINC00963-220ENST00000625171 NLGN1Q8N2Q7 840 aa14.47□□□□□ -0.09
LINC00963-220ENST00000625171 TSHZ2Q9NRE2 1034 aa14.47□□□□□ -0.09
LINC00963-220ENST00000625171 CARMIL3Q8ND23 1372 aa14.47□□□□□ -0.09
LINC00963-220ENST00000625171 C4AP0C0L4 1744 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 ANKRD18BA2A2Z9 1011 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 MX1P20591 662 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 OS9Q13438 667 aaPredicted RBP14.46□□□□□ -0.09
LINC00963-220ENST00000625171 NFIXQ14938 502 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
LINC00963-220ENST00000625171 TTC22Q5TAA0 569 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 TICAM2Q86XR7 235 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 NLGN2Q8NFZ4 835 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 RIPOR2Q9Y4F9 1068 aa14.46□□□□□ -0.09
LINC00963-220ENST00000625171 ITGA6P23229 1130 aa14.45□□□□□ -0.1
LINC00963-220ENST00000625171 LAMB2P55268 1798 aa14.45□□□□□ -0.1
LINC00963-220ENST00000625171 KLRG2A4D1S0 409 aaPredicted RBP14.44□□□□□ -0.1
LINC00963-220ENST00000625171 NBPF5PQ86XG9 351 aaPredicted RBP14.44□□□□□ -0.1
LINC00963-220ENST00000625171 EAF2Q96CJ1 260 aaPredicted RBP14.44□□□□□ -0.1
LINC00963-220ENST00000625171 GREM2Q9H772 168 aa14.44□□□□□ -0.1
LINC00963-220ENST00000625171 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 MYH3P11055 1940 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 ERC2O15083 957 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 PHF14O94880 888 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 HCLS1P14317 486 aaPredicted RBP14.43□□□□□ -0.1
LINC00963-220ENST00000625171 YBX3P16989 372 aaKnown RBP eCLIP14.43□□□□□ -0.1
LINC00963-220ENST00000625171 ERFEQ4G0M1 354 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 COL23A1Q86Y22 540 aaPredicted RBP14.43□□□□□ -0.1
LINC00963-220ENST00000625171 KLHDC4Q8TBB5 520 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 PI4K2BQ8TCG2 481 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 OTUD7AQ8TE49 926 aaPredicted RBP14.43□□□□□ -0.1
LINC00963-220ENST00000625171 NLRP3Q96P20 1036 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 IL1RAPL2Q9NP60 686 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 CEP126Q9P2H0 1117 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 AKAP2Q9Y2D5 859 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
LINC00963-220ENST00000625171 APBB1O00213 710 aa14.42□□□□□ -0.1
LINC00963-220ENST00000625171 ZBTB22O15209 634 aa14.42□□□□□ -0.1
LINC00963-220ENST00000625171 GLRX3O76003 335 aaKnown RBP14.42□□□□□ -0.1
LINC00963-220ENST00000625171 IFIT2P09913 472 aaKnown RBP14.42□□□□□ -0.1
LINC00963-220ENST00000625171 GSPT1P15170 499 aaKnown RBP14.42□□□□□ -0.1
LINC00963-220ENST00000625171 TFCP2Q12800 502 aa14.42□□□□□ -0.1
LINC00963-220ENST00000625171 LDHAL6AQ6ZMR3 332 aa14.42□□□□□ -0.1
LINC00963-220ENST00000625171 GPATCH3Q96I76 525 aa14.42□□□□□ -0.1
LINC00963-220ENST00000625171 CDC5LQ99459 802 aaKnown RBP14.42□□□□□ -0.1
LINC00963-220ENST00000625171 CHMP3Q9Y3E7 222 aa14.42□□□□□ -0.1
LINC00963-220ENST00000625171 MROH5Q6ZUA9 1318 aa14.41□□□□□ -0.1
LINC00963-220ENST00000625171 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
LINC00963-220ENST00000625171 GTF2E1P29083 439 aaPredicted RBP14.41□□□□□ -0.1
LINC00963-220ENST00000625171 LRRC24Q50LG9 513 aa14.41□□□□□ -0.1
LINC00963-220ENST00000625171 NUTM1Q86Y26 1132 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms