RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ADH6P28332 368 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 SPEM2Q0P670 501 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 TREML1Q86YW5 311 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 SPOCK3Q9BQ16 436 aa5.91□□□□□ -1.46
CDKL5-208ENST00000624953 TRIP4Q15650 581 aaPredicted RBP5.9□□□□□ -1.46
CDKL5-208ENST00000624953 XP32Q5T750 250 aa5.9□□□□□ -1.46
CDKL5-208ENST00000624953 TRAIPQ9BWF2 469 aa5.9□□□□□ -1.46
CDKL5-208ENST00000624953 GGA1Q9UJY5 639 aa5.9□□□□□ -1.46
CDKL5-208ENST00000624953 FANCD2Q9BXW9 1451 aa5.9□□□□□ -1.47
CDKL5-208ENST00000624953 ADAM23O75077 832 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 PROCP04070 461 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 PDE4CQ08493 712 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 COL9A3Q14050 684 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-208ENST00000624953 NAA30Q147X3 362 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-208ENST00000624953 B4GALNT3Q6L9W6 998 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 ABTB2Q8N961 1025 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 NEDD1Q8NHV4 660 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 GTF3C2Q8WUA4 911 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-208ENST00000624953 ZFATQ9P243 1243 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 RTCBQ9Y3I0 505 aaKnown RBP5.89□□□□□ -1.47
CDKL5-208ENST00000624953 STARD13Q9Y3M8 1113 aa5.89□□□□□ -1.47
CDKL5-208ENST00000624953 MSTNO14793 375 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 BRD1O95696 1058 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 DGKGP49619 791 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 SNRPNP63162 240 aaKnown RBP5.88□□□□□ -1.47
CDKL5-208ENST00000624953 LINC00114Q6XXX2 140 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 C20orf204Q6ZNR8 217 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 SYT9Q86SS6 491 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 EDARADDQ8WWZ3 215 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 NEUROD4Q9HD90 331 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 PRDM6Q9NQX0 595 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 ENAMQ9NRM1 1142 aa5.88□□□□□ -1.47
CDKL5-208ENST00000624953 ZNF608Q9ULD9 1512 aaPredicted RBP5.88□□□□□ -1.47
CDKL5-208ENST00000624953 EIF4G3O43432 1585 aaKnown RBP5.88□□□□□ -1.47
CDKL5-208ENST00000624953 ELOA3CA0A087WX78 387 aaPredicted RBP5.87□□□□□ -1.47
CDKL5-208ENST00000624953 ELOA3DA6NLF2 546 aaPredicted RBP5.87□□□□□ -1.47
CDKL5-208ENST00000624953 NEURL1BA8MQ27 555 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 ICMTO60725 284 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 IGHA2P01877 340 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 ARID4AP29374 1257 aaPredicted RBP5.87□□□□□ -1.47
CDKL5-208ENST00000624953 ZAP70P43403 619 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 PCBP4P57723 403 aaKnown RBP5.87□□□□□ -1.47
CDKL5-208ENST00000624953 SF3B2Q13435 895 aaKnown RBP5.87□□□□□ -1.47
CDKL5-208ENST00000624953 CCINQ13939 588 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 ELOA3BQ3SY89 546 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 XKR5Q6UX68 686 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 ELOA3Q8NG57 546 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 BTBD6Q96KE9 485 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 CFTRP13569 1480 aa5.87□□□□□ -1.47
CDKL5-208ENST00000624953 EPB42P16452 691 aa5.86□□□□□ -1.47
CDKL5-208ENST00000624953 MPSTP25325 297 aa5.86□□□□□ -1.47
CDKL5-208ENST00000624953 ARHGAP4P98171 946 aa5.86□□□□□ -1.47
CDKL5-208ENST00000624953 TRPM4Q8TD43 1214 aa5.86□□□□□ -1.47
CDKL5-208ENST00000624953 ARAP1Q96P48 1450 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 PHF20L1A8MW92 1017 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 ZBTB42B2RXF5 422 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 FZD6O60353 706 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 SOX18P35713 384 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 EIF1AXP47813 144 aaKnown RBP5.85□□□□□ -1.47
CDKL5-208ENST00000624953 SERPINB4P48594 390 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 FKBP4Q02790 459 aaKnown RBP eCLIP5.85□□□□□ -1.47
CDKL5-208ENST00000624953 MTMR3Q13615 1198 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 BEND7Q8N7W2 519 aaPredicted RBP5.85□□□□□ -1.47
CDKL5-208ENST00000624953 GALNT6Q8NCL4 622 aa5.85□□□□□ -1.47
CDKL5-208ENST00000624953 KRBA1A5PL33 1030 aa5.84□□□□□ -1.47
CDKL5-208ENST00000624953 PDGFAP04085 211 aa5.84□□□□□ -1.47
CDKL5-208ENST00000624953 GPLD1P80108 840 aa5.84□□□□□ -1.47
CDKL5-208ENST00000624953 CHSY3Q70JA7 882 aa5.84□□□□□ -1.47
CDKL5-208ENST00000624953 RAB44Q7Z6P3 723 aaPredicted RBP5.84□□□□□ -1.47
CDKL5-208ENST00000624953 GJD3Q8N144 294 aa5.84□□□□□ -1.47
CDKL5-208ENST00000624953 NAGPAQ9UK23 515 aa5.84□□□□□ -1.47
CDKL5-208ENST00000624953 USP20Q9Y2K6 914 aa5.84□□□□□ -1.47
CDKL5-208ENST00000624953 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.84□□□□□ -1.47
CDKL5-208ENST00000624953 TARBP1Q13395 1621 aaKnown RBP5.84□□□□□ -1.47
CDKL5-208ENST00000624953 XYLBO75191 536 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 NFKB1P19838 968 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 MZF1P28698 734 aaPredicted RBP5.83□□□□□ -1.48
CDKL5-208ENST00000624953 NRLP54845 237 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 NOM1Q5C9Z4 860 aaKnown RBP5.83□□□□□ -1.48
CDKL5-208ENST00000624953 PODNQ7Z5L7 613 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 ATCAYQ86WG3 371 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 RGL4Q8IZJ4 473 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 FAM13BQ9NYF5 915 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 TLR7Q9NYK1 1049 aaKnown RBP5.83□□□□□ -1.48
CDKL5-208ENST00000624953 MTMR7Q9Y216 660 aa5.83□□□□□ -1.48
CDKL5-208ENST00000624953 FAM13AO94988 1023 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 KIF4AO95239 1232 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 TARSP26639 723 aaKnown RBP5.82□□□□□ -1.48
CDKL5-208ENST00000624953 COL8A1P27658 744 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 ADH7P40394 386 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 ZNF211Q13398 564 aaPredicted RBP5.82□□□□□ -1.48
CDKL5-208ENST00000624953 GRIK5Q16478 980 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 PDE12Q6L8Q7 609 aaKnown RBP5.82□□□□□ -1.48
CDKL5-208ENST00000624953 ALKBH2Q6NS38 261 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 OR13H1Q8NG92 308 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 PIK3R5Q8WYR1 880 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 TTC9Q92623 222 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 BHMTQ93088 406 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 PRR12Q9ULL5 1215 aa5.82□□□□□ -1.48
CDKL5-208ENST00000624953 SLC6A14Q9UN76 642 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms