RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 NLRP3Q96P20 1036 aa16.43■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 GREM2Q9H772 168 aa16.43■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 SEC31BQ9NQW1 1179 aa16.41■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 CHRNA5P30532 468 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 COL11A2P13942 1736 aaPredicted RBP16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 SRGNP10124 158 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 AAMPQ13685 434 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 KLHDC4Q8TBB5 520 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
TRIM39-RPP21-201ENST00000623385 SRCAPQ6ZRS2 3230 aa16.39■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 PDE6BP35913 854 aa16.39■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 POLA2Q14181 598 aa16.39■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 RPAP2Q8IXW5 612 aaPredicted RBP16.39■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 SSH3Q8TE77 659 aa16.39■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 CHMP3Q9Y3E7 222 aa16.39■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 KIAA1551Q9HCM1 1747 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 KCNA3P22001 575 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 ITGA6P23229 1130 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 SLC51AQ86UW1 340 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 MYH3P11055 1940 aa16.38■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 IGHDP01880 384 aa16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 A0A0G2JLW4 131 aa16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 DPEP1P16444 411 aa16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 PTPN12Q05209 780 aaKnown RBP16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 TAF1P21675 1872 aa16.36■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 FHDC1Q9C0D6 1143 aaPredicted RBP16.36■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 H0YIN7 160 aa16.35■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 ANKRD18BA2A2Z9 1011 aa16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 NPR1P16066 1061 aa16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 TGFB2P61812 414 aa16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 MASTLQ96GX5 879 aa16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 LRP5O75197 1615 aa16.33■□□□□ 0.21
TRIM39-RPP21-201ENST00000623385 GRAPQ13588 217 aa16.33■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 STYK1Q6J9G0 422 aa16.33■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 ZNF622Q969S3 477 aaKnown RBP eCLIP16.33■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 SIL1Q9H173 461 aa16.33■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 RPS8P62241 208 aaKnown RBP16.32■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 LRRC24Q50LG9 513 aa16.32■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 EXOC6BQ9Y2D4 811 aa16.32■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 DLEC1Q9Y238 1755 aa16.32■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 WWC3Q9ULE0 1092 aa16.31■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 HMMRO75330 724 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 SYT17Q9BSW7 474 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 EYA2O00167 538 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 PRPF40BQ6NWY9 871 aaKnown RBP16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 LDHAL6AQ6ZMR3 332 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 SASH1O94885 1247 aa16.29■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 SPEF2Q9C093 1822 aa16.29■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 SLX4Q8IY92 1834 aa16.28■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 KDM2BQ8NHM5 1336 aa16.28■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 BBOX1O75936 387 aa16.28■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 IGHMBP2P38935 993 aaKnown RBP16.28■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
TRIM39-RPP21-201ENST00000623385 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms