RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 IFIT2P09913 472 aaKnown RBP15.41■□□□□ 0.06
PSME3-217ENST00000622892 AKAP4Q5JQC9 854 aa15.41■□□□□ 0.06
PSME3-217ENST00000622892 CREB3L3Q68CJ9 461 aa15.41■□□□□ 0.06
PSME3-217ENST00000622892 DNAAF4Q8WXU2 420 aa15.41■□□□□ 0.06
PSME3-217ENST00000622892 ZSCAN31Q96LW9 406 aaPredicted RBP15.41■□□□□ 0.06
PSME3-217ENST00000622892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
PSME3-217ENST00000622892 SLIT3O75094 1523 aa15.41■□□□□ 0.06
PSME3-217ENST00000622892 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
PSME3-217ENST00000622892 RNMTO43148 476 aaKnown RBP15.41■□□□□ 0.06
PSME3-217ENST00000622892 BEND3Q5T5X7 828 aa15.41■□□□□ 0.06
PSME3-217ENST00000622892 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
PSME3-217ENST00000622892 DDX11Q96FC9 970 aa15.41■□□□□ 0.06
PSME3-217ENST00000622892 NECTIN1Q15223 517 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 AACSQ86V21 672 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 SPATA32Q96LK8 384 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 CCDC8Q9H0W5 538 aaPredicted RBP15.4■□□□□ 0.06
PSME3-217ENST00000622892 DNAJC25Q9H1X3 360 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 ECHDC1Q9NTX5 307 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 TPM3P06753 285 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
PSME3-217ENST00000622892 MEGF6O75095 1541 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 NR1I2O75469 434 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 TNNT1P13805 278 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
PSME3-217ENST00000622892 ANKRD7Q92527 254 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 CCDC171Q6TFL3 1326 aa15.4■□□□□ 0.06
PSME3-217ENST00000622892 NCBP1Q09161 790 aaKnown RBP15.39■□□□□ 0.05
PSME3-217ENST00000622892 NMIQ13287 307 aaPredicted RBP15.39■□□□□ 0.05
PSME3-217ENST00000622892 C9orf78Q9NZ63 289 aaPredicted RBP15.39■□□□□ 0.05
PSME3-217ENST00000622892 A0A087WWV3 80 aa15.39■□□□□ 0.05
PSME3-217ENST00000622892 BICD2Q8TD16 824 aa15.39■□□□□ 0.05
PSME3-217ENST00000622892 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
PSME3-217ENST00000622892 CYP27B1O15528 508 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 CTIFO43310 598 aaKnown RBP15.38■□□□□ 0.05
PSME3-217ENST00000622892 FOSBP53539 338 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 ARID5BQ14865 1188 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 AMOTQ4VCS5 1084 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 SYTL4Q96C24 671 aaPredicted RBP15.38■□□□□ 0.05
PSME3-217ENST00000622892 BOLA2Q9H3K6 86 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
PSME3-217ENST00000622892 ZNF165P49910 485 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 SIL1Q9H173 461 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 ZNF330Q9Y3S2 320 aaPredicted RBP15.38■□□□□ 0.05
PSME3-217ENST00000622892 CWF19L2Q2TBE0 894 aaKnown RBP15.38■□□□□ 0.05
PSME3-217ENST00000622892 HSP90AB4PQ58FF6 505 aa15.38■□□□□ 0.05
PSME3-217ENST00000622892 CACTINQ8WUQ7 758 aaKnown RBP15.38■□□□□ 0.05
PSME3-217ENST00000622892 SLC27A2O14975 620 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 MYL6BP14649 208 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 ZNF75DP51815 510 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 TPD52L1Q16890 204 aaPredicted RBP15.37■□□□□ 0.05
PSME3-217ENST00000622892 CCDC144BQ3MJ40 725 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 TM6SF1Q9BZW5 370 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.37■□□□□ 0.05
PSME3-217ENST00000622892 V9GYY5 206 aaPredicted RBP15.37■□□□□ 0.05
PSME3-217ENST00000622892 TTC41PQ6P2S7 1318 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 JAK2O60674 1132 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 PTCD1O75127 700 aaKnown RBP15.37■□□□□ 0.05
PSME3-217ENST00000622892 PPFIA3O75145 1194 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 BLOC1S2Q6QNY1 142 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 LEO1Q8WVC0 666 aaPredicted RBP15.37■□□□□ 0.05
PSME3-217ENST00000622892 GTPBP4Q9BZE4 634 aaKnown RBP15.37■□□□□ 0.05
PSME3-217ENST00000622892 CLIP2Q9UDT6 1046 aa15.37■□□□□ 0.05
PSME3-217ENST00000622892 A0A0D9SFI3 127 aa15.36■□□□□ 0.05
PSME3-217ENST00000622892 EDC3Q96F86 508 aaKnown RBP15.36■□□□□ 0.05
PSME3-217ENST00000622892 TLR7Q9NYK1 1049 aaKnown RBP15.36■□□□□ 0.05
PSME3-217ENST00000622892 FBXW7Q969H0 707 aa15.36■□□□□ 0.05
PSME3-217ENST00000622892 PGBD1Q96JS3 809 aa15.36■□□□□ 0.05
PSME3-217ENST00000622892 CAMTA1Q9Y6Y1 1673 aa15.36■□□□□ 0.05
PSME3-217ENST00000622892 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
PSME3-217ENST00000622892 PHKG2P15735 406 aa15.36■□□□□ 0.05
PSME3-217ENST00000622892 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
PSME3-217ENST00000622892 EVI5LQ96CN4 794 aa15.36■□□□□ 0.05
PSME3-217ENST00000622892 KLHDC4Q8TBB5 520 aa15.35■□□□□ 0.05
PSME3-217ENST00000622892 MAP4K1Q92918 833 aa15.35■□□□□ 0.05
PSME3-217ENST00000622892 EAF2Q96CJ1 260 aaPredicted RBP15.35■□□□□ 0.05
PSME3-217ENST00000622892 PROSER3Q2NL68 480 aa15.35■□□□□ 0.05
PSME3-217ENST00000622892 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
PSME3-217ENST00000622892 FSD1Q9BTV5 496 aa15.35■□□□□ 0.05
PSME3-217ENST00000622892 SCAND2PQ9GZW5 306 aaPredicted RBP15.35■□□□□ 0.05
PSME3-217ENST00000622892 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
PSME3-217ENST00000622892 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 PDCP20941 246 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 CCDC112Q8NEF3 446 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 NDUFB9Q9Y6M9 179 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 CABP4P57796 275 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 LRRC2Q9BYS8 371 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 USP27XA6NNY8 438 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 CHGBP05060 677 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 TOB2Q14106 344 aaPredicted RBP15.34■□□□□ 0.05
PSME3-217ENST00000622892 ZNF589Q86UQ0 364 aaPredicted RBP15.34■□□□□ 0.05
PSME3-217ENST00000622892 PLA2G4DQ86XP0 818 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 ERCC4Q92889 916 aaPredicted RBP15.34■□□□□ 0.05
PSME3-217ENST00000622892 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
PSME3-217ENST00000622892 TRMT1Q9NXH9 659 aaKnown RBP15.34■□□□□ 0.05
PSME3-217ENST00000622892 ROBO1Q9Y6N7 1651 aa15.33■□□□□ 0.05
PSME3-217ENST00000622892 NPHP1O15259 732 aa15.33■□□□□ 0.04
PSME3-217ENST00000622892 PSMA5P28066 241 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms