RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SH3TC1Q8TE82 1336 aa26.17■■□□□ 1.78
SPAST-204ENST00000621856 GNPATO15228 680 aa26.17■■□□□ 1.78
SPAST-204ENST00000621856 CHMLP26374 656 aa26.17■■□□□ 1.78
SPAST-204ENST00000621856 RBM6P78332 1123 aaKnown RBP26.17■■□□□ 1.78
SPAST-204ENST00000621856 REC8O95072 547 aa26.17■■□□□ 1.78
SPAST-204ENST00000621856 LRRC24Q50LG9 513 aa26.17■■□□□ 1.78
SPAST-204ENST00000621856 CLEC4GQ6UXB4 293 aa26.17■■□□□ 1.78
SPAST-204ENST00000621856 TTLL11Q8NHH1 800 aa26.17■■□□□ 1.78
SPAST-204ENST00000621856 SCN7AQ01118 1682 aa26.16■■□□□ 1.78
SPAST-204ENST00000621856 BECN1Q14457 450 aa26.16■■□□□ 1.78
SPAST-204ENST00000621856 AK7Q96M32 723 aa26.15■■□□□ 1.78
SPAST-204ENST00000621856 ESYT1Q9BSJ8 1104 aa26.15■■□□□ 1.78
SPAST-204ENST00000621856 FBXO3Q9UK99 471 aa26.15■■□□□ 1.78
SPAST-204ENST00000621856 RTCBQ9Y3I0 505 aaKnown RBP26.15■■□□□ 1.78
SPAST-204ENST00000621856 PUS3Q9BZE2 481 aaKnown RBP26.14■■□□□ 1.78
SPAST-204ENST00000621856 GREM2Q9H772 168 aa26.14■■□□□ 1.78
SPAST-204ENST00000621856 C4BP0C0L5 1744 aa26.14■■□□□ 1.78
SPAST-204ENST00000621856 ANKRD18BA2A2Z9 1011 aa26.14■■□□□ 1.77
SPAST-204ENST00000621856 ITGA6P23229 1130 aa26.14■■□□□ 1.77
SPAST-204ENST00000621856 SLC4A3P48751 1232 aa26.14■■□□□ 1.77
SPAST-204ENST00000621856 SMIM5Q71RC9 77 aa26.14■■□□□ 1.77
SPAST-204ENST00000621856 GPR108Q9NPR9 543 aa26.14■■□□□ 1.77
SPAST-204ENST00000621856 DBNLQ9UJU6 430 aaKnown RBP26.14■■□□□ 1.77
SPAST-204ENST00000621856 RGL2O15211 777 aa26.12■■□□□ 1.77
SPAST-204ENST00000621856 NTSR2O95665 410 aa26.12■■□□□ 1.77
SPAST-204ENST00000621856 HCLS1P14317 486 aaPredicted RBP26.12■■□□□ 1.77
SPAST-204ENST00000621856 HSP90B1P14625 803 aaKnown RBP26.12■■□□□ 1.77
SPAST-204ENST00000621856 USP26Q9BXU7 913 aa26.12■■□□□ 1.77
SPAST-204ENST00000621856 CEP126Q9P2H0 1117 aa26.12■■□□□ 1.77
SPAST-204ENST00000621856 NARFQ9UHQ1 456 aa26.12■■□□□ 1.77
SPAST-204ENST00000621856 TRIM37O94972 964 aa26.11■■□□□ 1.77
SPAST-204ENST00000621856 EVI5LQ96CN4 794 aa26.11■■□□□ 1.77
SPAST-204ENST00000621856 DBNDD2Q9BQY9 259 aa26.11■■□□□ 1.77
SPAST-204ENST00000621856 LAMB2P55268 1798 aa26.11■■□□□ 1.77
SPAST-204ENST00000621856 DDX60Q8IY21 1712 aaKnown RBP26.11■■□□□ 1.77
SPAST-204ENST00000621856 ZPR1O75312 459 aa26.11■■□□□ 1.77
SPAST-204ENST00000621856 NEUROD6Q96NK8 337 aa26.11■■□□□ 1.77
SPAST-204ENST00000621856 BOLA2Q9H3K6 86 aa26.11■■□□□ 1.77
SPAST-204ENST00000621856 USPL1Q5W0Q7 1092 aa26.1■■□□□ 1.77
SPAST-204ENST00000621856 ZNF609O15014 1411 aa26.1■■□□□ 1.77
SPAST-204ENST00000621856 ATP5JP18859 108 aa26.08■■□□□ 1.77
SPAST-204ENST00000621856 SRP68Q9UHB9 627 aaKnown RBP26.08■■□□□ 1.77
SPAST-204ENST00000621856 LDHAL6AQ6ZMR3 332 aa26.08■■□□□ 1.76
SPAST-204ENST00000621856 BICDL1Q6ZP65 573 aa26.08■■□□□ 1.76
SPAST-204ENST00000621856 DIAPH3Q9NSV4 1193 aa26.08■■□□□ 1.76
SPAST-204ENST00000621856 BCL2L12Q9HB09 334 aa26.07■■□□□ 1.76
SPAST-204ENST00000621856 CNNM1Q9NRU3 951 aa26.07■■□□□ 1.76
SPAST-204ENST00000621856 LRRC4BQ9NT99 713 aa26.07■■□□□ 1.76
SPAST-204ENST00000621856 AKAP2Q9Y2D5 859 aa26.07■■□□□ 1.76
SPAST-204ENST00000621856 TIMM10P62072 90 aa26.06■■□□□ 1.76
SPAST-204ENST00000621856 TBC1D9BQ66K14 1250 aa26.06■■□□□ 1.76
SPAST-204ENST00000621856 ARHGEF1Q92888 912 aaKnown RBP26.06■■□□□ 1.76
SPAST-204ENST00000621856 A0A1B0GUL7 405 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 PHF14O94880 888 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 ANO2Q9NQ90 1003 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 C4AP0C0L4 1744 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 CCDC152Q4G0S7 254 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 METTL24Q5JXM2 366 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 SLC27A3Q5K4L6 730 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 TRAPPC3LQ5T215 181 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 AMIGO3Q86WK7 504 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 KIF2CQ99661 725 aa26.05■■□□□ 1.76
SPAST-204ENST00000621856 RXRBP28702 533 aa26.04■■□□□ 1.76
SPAST-204ENST00000621856 RFC4P35249 363 aa26.04■■□□□ 1.76
SPAST-204ENST00000621856 TBC1D2Q9BYX2 928 aa26.04■■□□□ 1.76
SPAST-204ENST00000621856 RIPOR2Q9Y4F9 1068 aa26.04■■□□□ 1.76
SPAST-204ENST00000621856 RIC1Q4ADV7 1423 aa26.04■■□□□ 1.76
SPAST-204ENST00000621856 RUFY2Q8WXA3 655 aa26.03■■□□□ 1.76
SPAST-204ENST00000621856 SETDB2Q96T68 719 aa26.03■■□□□ 1.76
SPAST-204ENST00000621856 FSD1Q9BTV5 496 aa26.03■■□□□ 1.76
SPAST-204ENST00000621856 HIP1O00291 1037 aa26.02■■□□□ 1.76
SPAST-204ENST00000621856 GTF2E1P29083 439 aaPredicted RBP26.02■■□□□ 1.76
SPAST-204ENST00000621856 ERFEQ4G0M1 354 aa26.02■■□□□ 1.76
SPAST-204ENST00000621856 CWC27Q6UX04 472 aaKnown RBP26.02■■□□□ 1.76
SPAST-204ENST00000621856 SGSM2O43147 1006 aa26.02■■□□□ 1.76
SPAST-204ENST00000621856 DNAJC2Q99543 621 aaKnown RBP26.02■■□□□ 1.76
SPAST-204ENST00000621856 NYXQ9GZU5 481 aa26.02■■□□□ 1.76
SPAST-204ENST00000621856 LRP5O75197 1615 aa26.02■■□□□ 1.76
SPAST-204ENST00000621856 COL24A1Q17RW2 1714 aa26.02■■□□□ 1.76
SPAST-204ENST00000621856 MCCP23508 829 aa26.01■■□□□ 1.75
SPAST-204ENST00000621856 HSCBQ8IWL3 235 aa26.01■■□□□ 1.75
SPAST-204ENST00000621856 HAUS7Q99871 368 aa26.01■■□□□ 1.75
SPAST-204ENST00000621856 RTL9Q8NET4 1388 aa26■■□□□ 1.75
SPAST-204ENST00000621856 GORABQ5T7V8 394 aa26■■□□□ 1.75
SPAST-204ENST00000621856 IL25Q9H293 177 aa26■■□□□ 1.75
SPAST-204ENST00000621856 ADRA2BP18089 450 aa26■■□□□ 1.75
SPAST-204ENST00000621856 ATP2B3Q16720 1220 aa26■■□□□ 1.75
SPAST-204ENST00000621856 UBR3Q6ZT12 1888 aa25.99■■□□□ 1.75
SPAST-204ENST00000621856 SPEF2Q9C093 1822 aa25.99■■□□□ 1.75
SPAST-204ENST00000621856 EDC3Q96F86 508 aaKnown RBP25.99■■□□□ 1.75
SPAST-204ENST00000621856 MPHOSPH8Q99549 860 aa25.99■■□□□ 1.75
SPAST-204ENST00000621856 SEC31BQ9NQW1 1179 aa25.99■■□□□ 1.75
SPAST-204ENST00000621856 KIAA1211Q6ZU35 1233 aa25.98■■□□□ 1.75
SPAST-204ENST00000621856 NBPF5PQ86XG9 351 aaPredicted RBP25.98■■□□□ 1.75
SPAST-204ENST00000621856 XAGE2Q96GT9 111 aa25.98■■□□□ 1.75
SPAST-204ENST00000621856 MROH5Q6ZUA9 1318 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 EPB41L2O43491 1005 aaKnown RBP25.97■■□□□ 1.75
SPAST-204ENST00000621856 RABEP1Q15276 862 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 CCDC158Q5M9N0 1113 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 SNX21Q969T3 373 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms