RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
CBWD3-217ENST00000621474 CRAMP1Q96RY5 1269 aa18.12■□□□□ 0.49
CBWD3-217ENST00000621474 USP44Q9H0E7 712 aa18.12■□□□□ 0.49
CBWD3-217ENST00000621474 LRRC37AA6NMS7 1700 aa18.11■□□□□ 0.49
CBWD3-217ENST00000621474 CTSWP56202 376 aa18.11■□□□□ 0.49
CBWD3-217ENST00000621474 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
CBWD3-217ENST00000621474 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
CBWD3-217ENST00000621474 CLUAP1Q96AJ1 413 aa18.11■□□□□ 0.49
CBWD3-217ENST00000621474 RBM17Q96I25 401 aaKnown RBP18.11■□□□□ 0.49
CBWD3-217ENST00000621474 ALDH1B1P30837 517 aa18.1■□□□□ 0.49
CBWD3-217ENST00000621474 CCT4P50991 539 aaKnown RBP18.1■□□□□ 0.49
CBWD3-217ENST00000621474 EPHA10Q5JZY3 1008 aa18.1■□□□□ 0.49
CBWD3-217ENST00000621474 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
CBWD3-217ENST00000621474 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
CBWD3-217ENST00000621474 C21orf2O43822 256 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 GRIN3BO60391 1043 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 RLBP1P12271 317 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 FOXO4P98177 505 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 CELF1Q92879 486 aaKnown RBP18.09■□□□□ 0.49
CBWD3-217ENST00000621474 SEC31BQ9NQW1 1179 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-217ENST00000621474 CCDC88AQ3V6T2 1871 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 CSF1RP07333 972 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
CBWD3-217ENST00000621474 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
CBWD3-217ENST00000621474 CCDC85AQ96PX6 553 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-217ENST00000621474 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-217ENST00000621474 GRAPQ13588 217 aa18.08■□□□□ 0.48
CBWD3-217ENST00000621474 DDX46Q7L014 1031 aaKnown RBP18.08■□□□□ 0.48
CBWD3-217ENST00000621474 GRAPLQ8TC17 118 aaPredicted RBP18.08■□□□□ 0.48
CBWD3-217ENST00000621474 GREM2Q9H772 168 aa18.08■□□□□ 0.48
CBWD3-217ENST00000621474 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
CBWD3-217ENST00000621474 CCDC152Q4G0S7 254 aa18.07■□□□□ 0.48
CBWD3-217ENST00000621474 TMEM57Q8N5G2 664 aa18.07■□□□□ 0.48
CBWD3-217ENST00000621474 LTBP1Q14766 1721 aa18.06■□□□□ 0.48
CBWD3-217ENST00000621474 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
CBWD3-217ENST00000621474 NFKBIEO00221 500 aa18.06■□□□□ 0.48
CBWD3-217ENST00000621474 PPEF1O14829 653 aaPredicted RBP18.06■□□□□ 0.48
CBWD3-217ENST00000621474 PLIN1O60240 522 aa18.06■□□□□ 0.48
CBWD3-217ENST00000621474 MEIS3Q99687 375 aa18.06■□□□□ 0.48
CBWD3-217ENST00000621474 PRELPP51888 382 aa18.05■□□□□ 0.48
CBWD3-217ENST00000621474 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
CBWD3-217ENST00000621474 RASSF7Q02833 373 aa18.05■□□□□ 0.48
CBWD3-217ENST00000621474 ARHGAP27Q6ZUM4 889 aa18.05■□□□□ 0.48
CBWD3-217ENST00000621474 DZIP1LQ8IYY4 767 aaKnown RBP18.05■□□□□ 0.48
CBWD3-217ENST00000621474 DUOX1Q9NRD9 1551 aa18.05■□□□□ 0.48
CBWD3-217ENST00000621474 BBOX1O75936 387 aa18.04■□□□□ 0.48
CBWD3-217ENST00000621474 RABL6Q3YEC7 729 aaPredicted RBP18.04■□□□□ 0.48
CBWD3-217ENST00000621474 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
CBWD3-217ENST00000621474 BICC1Q9H694 974 aaKnown RBP18.04■□□□□ 0.48
CBWD3-217ENST00000621474 ATP6V0A2Q9Y487 856 aa18.04■□□□□ 0.48
CBWD3-217ENST00000621474 DICER1Q9UPY3 1922 aaKnown RBP18.03■□□□□ 0.48
CBWD3-217ENST00000621474 ITGA6P23229 1130 aa18.03■□□□□ 0.48
CBWD3-217ENST00000621474 LMBR1LQ6UX01 489 aa18.03■□□□□ 0.48
CBWD3-217ENST00000621474 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
CBWD3-217ENST00000621474 A0A1B0GUL6 1792 aa18.03■□□□□ 0.48
CBWD3-217ENST00000621474 RPS8P62241 208 aaKnown RBP18.02■□□□□ 0.48
CBWD3-217ENST00000621474 CCDC93Q567U6 631 aa18.02■□□□□ 0.48
CBWD3-217ENST00000621474 FTSJ3Q8IY81 847 aaKnown RBP18.02■□□□□ 0.48
CBWD3-217ENST00000621474 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
CBWD3-217ENST00000621474 SP8Q8IXZ3 490 aa18.01■□□□□ 0.47
CBWD3-217ENST00000621474 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
CBWD3-217ENST00000621474 UBTFL1P0CB47 393 aaPredicted RBP18.01■□□□□ 0.47
CBWD3-217ENST00000621474 C20orf194Q5TEA3 1177 aa18.01■□□□□ 0.47
CBWD3-217ENST00000621474 TIAM2Q8IVF5 1701 aa18■□□□□ 0.47
CBWD3-217ENST00000621474 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
CBWD3-217ENST00000621474 TMC4Q7Z404 712 aa17.99■□□□□ 0.47
CBWD3-217ENST00000621474 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
CBWD3-217ENST00000621474 ITPRIPQ8IWB1 547 aa17.99■□□□□ 0.47
CBWD3-217ENST00000621474 CDC5LQ99459 802 aaKnown RBP17.99■□□□□ 0.47
CBWD3-217ENST00000621474 TAOK3Q9H2K8 898 aa17.99■□□□□ 0.47
CBWD3-217ENST00000621474 LRRFIP2Q9Y608 721 aaKnown RBP17.99■□□□□ 0.47
CBWD3-217ENST00000621474 COL4A5P29400 1685 aa17.99■□□□□ 0.47
CBWD3-217ENST00000621474 ZBTB7BO15156 539 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-217ENST00000621474 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
CBWD3-217ENST00000621474 PSMD1Q99460 953 aa17.98■□□□□ 0.47
CBWD3-217ENST00000621474 FKBP4Q02790 459 aaKnown RBP eCLIP17.98■□□□□ 0.47
CBWD3-217ENST00000621474 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
CBWD3-217ENST00000621474 ZNF594Q96JF6 807 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-217ENST00000621474 BSDC1Q9NW68 430 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-217ENST00000621474 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
CBWD3-217ENST00000621474 ANKRD18BA2A2Z9 1011 aa17.97■□□□□ 0.47
CBWD3-217ENST00000621474 GNAI3P08754 354 aa17.97■□□□□ 0.47
CBWD3-217ENST00000621474 RFX5P48382 616 aaPredicted RBP17.96■□□□□ 0.47
CBWD3-217ENST00000621474 GPSM2P81274 684 aa17.96■□□□□ 0.47
CBWD3-217ENST00000621474 MVPQ14764 893 aaKnown RBP17.96■□□□□ 0.47
CBWD3-217ENST00000621474 RTFDC1Q9BY42 306 aaPredicted RBP17.96■□□□□ 0.47
CBWD3-217ENST00000621474 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
CBWD3-217ENST00000621474 LMNB1P20700 586 aa17.95■□□□□ 0.46
CBWD3-217ENST00000621474 RRP1P56182 461 aaKnown RBP17.95■□□□□ 0.46
CBWD3-217ENST00000621474 PDE3AQ14432 1141 aa17.95■□□□□ 0.46
CBWD3-217ENST00000621474 CCDC57Q2TAC2 916 aa17.95■□□□□ 0.46
CBWD3-217ENST00000621474 GRIPAP1Q4V328 841 aa17.95■□□□□ 0.46
CBWD3-217ENST00000621474 C9orf131Q5VYM1 1079 aa17.95■□□□□ 0.46
CBWD3-217ENST00000621474 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
CBWD3-217ENST00000621474 MINPP1Q9UNW1 487 aa17.95■□□□□ 0.46
CBWD3-217ENST00000621474 WTIPA6NIX2 430 aaPredicted RBP17.94■□□□□ 0.46
CBWD3-217ENST00000621474 MS4A1P11836 297 aa17.94■□□□□ 0.46
CBWD3-217ENST00000621474 IGHMBP2P38935 993 aaKnown RBP17.94■□□□□ 0.46
CBWD3-217ENST00000621474 MPNDQ8N594 471 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms