RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 PTPRCP08575 1304 aa10.9□□□□□ -0.66
GTF2I-219ENST00000621040 NEURL1BA8MQ27 555 aa10.9□□□□□ -0.66
GTF2I-219ENST00000621040 H0YIN7 160 aa10.9□□□□□ -0.66
GTF2I-219ENST00000621040 HSP90AA1P07900 732 aaKnown RBP10.9□□□□□ -0.66
GTF2I-219ENST00000621040 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
GTF2I-219ENST00000621040 C20orf194Q5TEA3 1177 aa10.9□□□□□ -0.66
GTF2I-219ENST00000621040 TTLL6Q8N841 843 aa10.9□□□□□ -0.66
GTF2I-219ENST00000621040 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
GTF2I-219ENST00000621040 BICDL1Q6ZP65 573 aa10.9□□□□□ -0.67
GTF2I-219ENST00000621040 NECTIN2Q92692 538 aa10.9□□□□□ -0.67
GTF2I-219ENST00000621040 CNKSR1Q969H4 720 aa10.9□□□□□ -0.67
GTF2I-219ENST00000621040 SH3TC1Q8TE82 1336 aa10.89□□□□□ -0.67
GTF2I-219ENST00000621040 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
GTF2I-219ENST00000621040 ABCC4O15439 1325 aa10.89□□□□□ -0.67
GTF2I-219ENST00000621040 PRPF40BQ6NWY9 871 aaKnown RBP10.89□□□□□ -0.67
GTF2I-219ENST00000621040 MAP3K2Q9Y2U5 619 aa10.89□□□□□ -0.67
GTF2I-219ENST00000621040 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
GTF2I-219ENST00000621040 PSMD1Q99460 953 aa10.89□□□□□ -0.67
GTF2I-219ENST00000621040 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 RRAGDQ9NQL2 400 aaPredicted RBP10.88□□□□□ -0.67
GTF2I-219ENST00000621040 IRS2Q9Y4H2 1338 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 PI4KAP2A4QPH2 592 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 DDX58O95786 925 aaKnown RBP10.88□□□□□ -0.67
GTF2I-219ENST00000621040 CSF1RP07333 972 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 SOGA3Q5TF21 947 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 SYNE4Q8N205 404 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 PI4KAP1Q8N8J0 262 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
GTF2I-219ENST00000621040 ELL2O00472 640 aaPredicted RBP10.87□□□□□ -0.67
GTF2I-219ENST00000621040 GPTP24298 496 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 GCKRQ14397 625 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 SSH1Q8WYL5 1049 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 ZNF330Q9Y3S2 320 aaPredicted RBP10.87□□□□□ -0.67
GTF2I-219ENST00000621040 DNAAF4Q8WXU2 420 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 ARHGAP45Q92619 1136 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 STK31Q9BXU1 1019 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 CWC25Q9NXE8 425 aaPredicted RBP10.87□□□□□ -0.67
GTF2I-219ENST00000621040 MYH13Q9UKX3 1938 aa10.87□□□□□ -0.67
GTF2I-219ENST00000621040 ALDH1B1P30837 517 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 RARSP54136 660 aaKnown RBP10.86□□□□□ -0.67
GTF2I-219ENST00000621040 AIMP1Q12904 312 aaKnown RBP10.86□□□□□ -0.67
GTF2I-219ENST00000621040 GPR162Q16538 588 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 ALDH1L1O75891 902 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 MYD88Q99836 296 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 ATP6V0A2Q9Y487 856 aa10.86□□□□□ -0.67
GTF2I-219ENST00000621040 THSD7BQ9C0I4 1608 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 FOXO4P98177 505 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 GRAPQ13588 217 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 CCDC24Q8N4L8 307 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 GRAPLQ8TC17 118 aaPredicted RBP10.85□□□□□ -0.67
GTF2I-219ENST00000621040 KAZALD1Q96I82 304 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 KDM2BQ8NHM5 1336 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 PDE4AP27815 886 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
GTF2I-219ENST00000621040 RIC3Q7Z5B4 369 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 NPM2Q86SE8 214 aaKnown RBP10.85□□□□□ -0.67
GTF2I-219ENST00000621040 RBM17Q96I25 401 aaKnown RBP10.85□□□□□ -0.67
GTF2I-219ENST00000621040 PAPPA2Q9BXP8 1791 aa10.85□□□□□ -0.67
GTF2I-219ENST00000621040 ZBTB22O15209 634 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 RABL6Q3YEC7 729 aaPredicted RBP10.84□□□□□ -0.67
GTF2I-219ENST00000621040 SLC51AQ86UW1 340 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 SP8Q8IXZ3 490 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 PDE8AO60658 829 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 BCS1LQ9Y276 419 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 NFKBIBQ15653 356 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
GTF2I-219ENST00000621040 TRMT112Q9UI30 125 aaKnown RBP10.84□□□□□ -0.67
GTF2I-219ENST00000621040 BBOX1O75936 387 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 ZNF784Q8NCA9 323 aaPredicted RBP10.83□□□□□ -0.68
GTF2I-219ENST00000621040 NLRP3Q96P20 1036 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 IRS4O14654 1257 aaPredicted RBP10.83□□□□□ -0.68
GTF2I-219ENST00000621040 LMNB1P20700 586 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 CTSWP56202 376 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 RASSF7Q02833 373 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 CWF19L2Q2TBE0 894 aaKnown RBP10.83□□□□□ -0.68
GTF2I-219ENST00000621040 CCDC93Q567U6 631 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 TTLL11Q8NHH1 800 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 FAM89AQ96GI7 184 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 TRPM7Q96QT4 1865 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 PPEF1O14829 653 aaPredicted RBP10.83□□□□□ -0.68
GTF2I-219ENST00000621040 RTKN2Q8IZC4 609 aa10.83□□□□□ -0.68
GTF2I-219ENST00000621040 FZD9O00144 591 aa10.82□□□□□ -0.68
GTF2I-219ENST00000621040 HCLS1P14317 486 aaPredicted RBP10.82□□□□□ -0.68
GTF2I-219ENST00000621040 CLCN1P35523 988 aa10.82□□□□□ -0.68
GTF2I-219ENST00000621040 KLHL34Q8N239 644 aa10.82□□□□□ -0.68
GTF2I-219ENST00000621040 PDCL3Q9H2J4 239 aa10.82□□□□□ -0.68
GTF2I-219ENST00000621040 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
GTF2I-219ENST00000621040 HSP90B1P14625 803 aaKnown RBP10.81□□□□□ -0.68
GTF2I-219ENST00000621040 YY1P25490 414 aa10.81□□□□□ -0.68
GTF2I-219ENST00000621040 INTS3Q68E01 1043 aaKnown RBP10.81□□□□□ -0.68
GTF2I-219ENST00000621040 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
GTF2I-219ENST00000621040 C21orf2O43822 256 aa10.81□□□□□ -0.68
GTF2I-219ENST00000621040 POTECB2RU33 542 aa10.8□□□□□ -0.68
GTF2I-219ENST00000621040 FKBP5Q13451 457 aaPredicted RBP10.8□□□□□ -0.68
GTF2I-219ENST00000621040 KIF16BQ96L93 1317 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms