RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PIBF1Q8WXW3 757 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CCDC114Q96M63 670 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 ZNF692Q9BU19 519 aaPredicted RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 URB2Q14146 1524 aaKnown RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CASTP20810 708 aaKnown RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 GABPB1Q06547 395 aaPredicted RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 TTC39AQ5SRH9 613 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CEP57Q86XR8 500 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 WDR63Q8IWG1 891 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 LMBR1Q8WVP7 490 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CWC25Q9NXE8 425 aaPredicted RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 FANCAO15360 1455 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 C9orf84Q5VXU9 1444 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 KLHL10Q6JEL2 608 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 ARHGAP24Q8N264 748 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 DPF3Q92784 378 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 C16orf45Q96MC5 204 aaPredicted RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 LBHD1Q9BQE6 289 aaPredicted RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 PPFIA2O75334 1257 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 SLU7O95391 586 aaKnown RBP8.19□□□□□ -1.1
COLCA1-205ENST00000620864 MPHOSPH8Q99549 860 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 TFCP2L1Q9NZI6 479 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 IQGAP2Q13576 1575 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 LPXNO60711 386 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 CYLC1P35663 651 aaPredicted RBP8.19□□□□□ -1.1
COLCA1-205ENST00000620864 ZNF76P36508 570 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 NAA25Q14CX7 972 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 TMEM266Q2M3C6 531 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 KCNH5Q8NCM2 988 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 PANK1Q8TE04 598 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 UBAC1Q9BSL1 405 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 U3KPZ7 1027 aaPredicted RBP8.19□□□□□ -1.1
COLCA1-205ENST00000620864 IRX4P78413 519 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 SPAG1Q07617 926 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 MVPQ14764 893 aaKnown RBP8.19□□□□□ -1.1
COLCA1-205ENST00000620864 MAP3K13O43283 966 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 CHD1LQ86WJ1 897 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 CTNNBL1Q8WYA6 563 aaPredicted RBP8.19□□□□□ -1.1
COLCA1-205ENST00000620864 AKAP2Q9Y2D5 859 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 GMNNO75496 209 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 MAP7Q14244 749 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 RPGRQ92834 1020 aaKnown RBP8.19□□□□□ -1.1
COLCA1-205ENST00000620864 RMND1Q9NWS8 449 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 BCAP29Q9UHQ4 241 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 ZNF652Q9Y2D9 606 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 HECW1Q76N89 1606 aa8.19□□□□□ -1.1
COLCA1-205ENST00000620864 STARD3NLO95772 234 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 TERF1P54274 439 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 TRPC3Q13507 836 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 SPATS2Q86XZ4 545 aaKnown RBP8.18□□□□□ -1.1
COLCA1-205ENST00000620864 NUDT16Q96DE0 195 aaKnown RBP8.18□□□□□ -1.1
COLCA1-205ENST00000620864 HMGB3O15347 200 aaKnown RBP8.18□□□□□ -1.1
COLCA1-205ENST00000620864 KLHL40Q2TBA0 621 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 TROQ12816 1431 aaPredicted RBP8.18□□□□□ -1.1
COLCA1-205ENST00000620864 CTAGE9A4FU28 777 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 ATP2A2P16615 1042 aaKnown RBP8.18□□□□□ -1.1
COLCA1-205ENST00000620864 TPD52P55327 224 aaPredicted RBP8.18□□□□□ -1.1
COLCA1-205ENST00000620864 ZBTB16Q05516 673 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
COLCA1-205ENST00000620864 CCDC14Q49A88 953 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 HDXQ7Z353 690 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 NDC80O14777 642 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 ZNF365Q70YC5 407 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 USP37Q86T82 979 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 ATRIPQ8WXE1 791 aa8.18□□□□□ -1.1
COLCA1-205ENST00000620864 RAB11FIP3O75154 756 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 BMP15O95972 392 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 UBE2HP62256 183 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 RPAP2Q8IXW5 612 aaPredicted RBP8.17□□□□□ -1.1
COLCA1-205ENST00000620864 EHMT1Q9H9B1 1298 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 JADE2Q9NQC1 790 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 GBP7Q8N8V2 638 aaPredicted RBP8.17□□□□□ -1.1
COLCA1-205ENST00000620864 FAM76AQ8TAV0 307 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 CCDC12Q8WUD4 166 aaPredicted RBP8.17□□□□□ -1.1
COLCA1-205ENST00000620864 USP21Q9UK80 565 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 ADCY5O95622 1261 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
COLCA1-205ENST00000620864 KIF5AQ12840 1032 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 WHAMMP3Q1A5X7 153 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 ZBTB24O43167 697 aaPredicted RBP8.17□□□□□ -1.1
COLCA1-205ENST00000620864 KRT83P78385 493 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.17□□□□□ -1.1
COLCA1-205ENST00000620864 CPLX4Q7Z7G2 160 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 TTC16Q8NEE8 873 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 RAB3IPQ96QF0 476 aaPredicted RBP8.17□□□□□ -1.1
COLCA1-205ENST00000620864 COMMD10Q9Y6G5 202 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 NCOA2Q15596 1464 aa8.17□□□□□ -1.1
COLCA1-205ENST00000620864 GNG11P61952 73 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 TCIRG1Q13488 830 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 TDRD12Q587J7 1177 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 BANK1Q8NDB2 785 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 CDK13Q14004 1512 aaKnown RBP8.16□□□□□ -1.1
COLCA1-205ENST00000620864 FERMT2Q96AC1 680 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 A0A087WZG4 1122 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 CLUL1Q15846 466 aa8.16□□□□□ -1.1
COLCA1-205ENST00000620864 USHBP1Q8N6Y0 703 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms