RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.79□□□□□ -1.64
DMD-230ENST00000620040 DDX27Q96GQ7 796 aaKnown RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 SPATA31E1Q6ZUB1 1445 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 RAD21O60216 631 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 CETN1Q12798 172 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 RPAP2Q8IXW5 612 aaPredicted RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 RMND1Q9NWS8 449 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 MAP7D1Q3KQU3 841 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 MIER3Q7Z3K6 550 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 TEX2Q8IWB9 1127 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 NEUROD6Q96NK8 337 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 UHRF1BP1LA0JNW5 1464 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 SF3B2Q13435 895 aaKnown RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 NGDNQ8NEJ9 315 aaKnown RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 LMBR1Q8WVP7 490 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 SYNMO15061 1565 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 RAB3IPQ96QF0 476 aaPredicted RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 BCAP29Q9UHQ4 241 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 RFC1P35251 1148 aaPredicted RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 CLUL1Q15846 466 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 VCX3AQ9NNX9 186 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 TDRD12Q587J7 1177 aaKnown RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 RNF10Q8N5U6 811 aaKnown RBP4.79□□□□□ -1.64
DMD-230ENST00000620040 TRIM4Q9C037 500 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 TSPYL4Q9UJ04 414 aa4.79□□□□□ -1.64
DMD-230ENST00000620040 NEURL4Q96JN8 1562 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 MX1P20591 662 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ZBTB16Q05516 673 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 RTEL1-TNFRSF6BF6WH68 1400 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ERCC6LQ2NKX8 1250 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 JAKMIP1Q96N16 626 aaKnown RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 DNAJC8O75937 253 aaPredicted RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 HNRNPMP52272 730 aaKnown RBP eCLIP4.78□□□□□ -1.64
DMD-230ENST00000620040 AMPD3Q01432 767 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 NDUFAB1O14561 156 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ERCC3P19447 782 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 CTNNA2P26232 953 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 LIMCH1Q9UPQ0 1083 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 SAMD9Q5K651 1589 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ASXL1Q8IXJ9 1541 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ELP1O95163 1332 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 PRC1O43663 620 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 SURF6O75683 361 aaKnown RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 ATP2A2P16615 1042 aaKnown RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 TNNC1P63316 161 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 STX6O43752 255 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 PPFIA4O75335 1185 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 TMEM132AQ24JP5 1023 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 KIAA1524Q8TCG1 905 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 LRRC27Q9C0I9 530 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 MTRF1LQ9UGC7 380 aaKnown RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 FAN1Q9Y2M0 1017 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ANKRD50Q9ULJ7 1429 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ATP2B1P20020 1258 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 PPFIA1Q13136 1202 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 CEP85LQ5SZL2 805 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 CCDC65Q8IXS2 484 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 Q9H521 79 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 GNL3LQ9NVN8 582 aaKnown RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 DNAI1Q9UI46 699 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 RAB11FIP3O75154 756 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ZKSCAN8Q15776 578 aaPredicted RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 CCDC184Q52MB2 194 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 U3KPZ7 1027 aaPredicted RBP4.78□□□□□ -1.64
DMD-230ENST00000620040 PBRM1Q86U86 1689 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 LRRIQ1Q96JM4 1722 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 CEP104O60308 925 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 AKAP2Q9Y2D5 859 aa4.78□□□□□ -1.64
DMD-230ENST00000620040 ZEB2O60315 1214 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 CFAP58Q5T655 872 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 CNNM3Q8NE01 707 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 PIBF1Q8WXW3 757 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.77□□□□□ -1.65
DMD-230ENST00000620040 RAD54L2Q9Y4B4 1467 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 NDC80O14777 642 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 ATP2C2O75185 946 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 TPD52P55327 224 aaPredicted RBP4.77□□□□□ -1.65
DMD-230ENST00000620040 STK3Q13188 491 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 GOLGA5Q8TBA6 731 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 CCDC96Q2M329 555 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 BMP15O95972 392 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 ACTN2P35609 894 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 TAOK1Q7L7X3 1001 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 EFCAB13Q8IY85 973 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 SEC62Q99442 399 aaKnown RBP4.77□□□□□ -1.65
DMD-230ENST00000620040 NUF2Q9BZD4 464 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 NKIRAS1Q9NYS0 192 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 ABCC11Q96J66 1382 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 SSFA2P28290 1259 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 YEATS2Q9ULM3 1422 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 GOLGA6CA6NDK9 693 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 GOLGA6DP0CG33 693 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 EIF2S2P20042 333 aaKnown RBP4.77□□□□□ -1.65
DMD-230ENST00000620040 PLCB1Q9NQ66 1216 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 GOLGA6AQ9NYA3 693 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 CNGA1P29973 690 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 ANTXR1Q9H6X2 564 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 VEZTQ9HBM0 779 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 MACROD2A1Z1Q3 448 aa4.77□□□□□ -1.65
DMD-230ENST00000620040 SLMAPQ14BN4 828 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms