RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 USP48Q86UV5 1035 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 ADCY9O60503 1353 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 ATP5JP18859 108 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 CLCN1P35523 988 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 NFXL1Q6ZNB6 911 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 EAF2Q96CJ1 260 aaPredicted RBP11.72□□□□□ -0.53
CDH23-213ENST00000619887 ARID3AQ99856 593 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 TOPAZ1Q8N9V7 1692 aa11.72□□□□□ -0.53
CDH23-213ENST00000619887 KDM4AO75164 1064 aa11.71□□□□□ -0.53
CDH23-213ENST00000619887 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
CDH23-213ENST00000619887 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
CDH23-213ENST00000619887 ANKRD18BA2A2Z9 1011 aa11.71□□□□□ -0.53
CDH23-213ENST00000619887 KINO60870 393 aaKnown RBP11.71□□□□□ -0.53
CDH23-213ENST00000619887 SYT1P21579 422 aa11.71□□□□□ -0.53
CDH23-213ENST00000619887 MAP3K11Q16584 847 aa11.71□□□□□ -0.53
CDH23-213ENST00000619887 FERMT3Q86UX7 667 aa11.71□□□□□ -0.53
CDH23-213ENST00000619887 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
CDH23-213ENST00000619887 SLC27A2O14975 620 aa11.71□□□□□ -0.54
CDH23-213ENST00000619887 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.54
CDH23-213ENST00000619887 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.54
CDH23-213ENST00000619887 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.54
CDH23-213ENST00000619887 ADAMTS2O95450 1211 aa11.71□□□□□ -0.54
CDH23-213ENST00000619887 HSPA2P54652 639 aa11.71□□□□□ -0.54
CDH23-213ENST00000619887 ERICH2A1L162 156 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 TPM2P07951 284 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 MCM5P33992 734 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 HS1BP3Q53T59 392 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 MPHOSPH8Q99549 860 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 EXOC5O00471 708 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 MARCH6O60337 910 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 MTMR7Q9Y216 660 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 EYA2O00167 538 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
CDH23-213ENST00000619887 SART3Q15020 963 aaKnown RBP11.7□□□□□ -0.54
CDH23-213ENST00000619887 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 ZSCAN16Q9H4T2 348 aaPredicted RBP11.7□□□□□ -0.54
CDH23-213ENST00000619887 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
CDH23-213ENST00000619887 DDX19AQ9NUU7 478 aaKnown RBP11.7□□□□□ -0.54
CDH23-213ENST00000619887 FMN2Q9NZ56 1722 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 RPS6KB1P23443 525 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 DDIT3P35638 169 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 USP42Q9H9J4 1324 aaKnown RBP11.69□□□□□ -0.54
CDH23-213ENST00000619887 CDKL5O76039 1030 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 TTF1Q15361 905 aaPredicted RBP11.69□□□□□ -0.54
CDH23-213ENST00000619887 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDH23-213ENST00000619887 NAT10Q9H0A0 1025 aaKnown RBP11.69□□□□□ -0.54
CDH23-213ENST00000619887 ZSWIM6Q9HCJ5 1215 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 DBNDD2Q9BQY9 259 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
CDH23-213ENST00000619887 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
CDH23-213ENST00000619887 PKP1Q13835 747 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 LDHAL6AQ6ZMR3 332 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 KBTBD3Q8NAB2 608 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 NOL10Q9BSC4 688 aaKnown RBP11.68□□□□□ -0.54
CDH23-213ENST00000619887 NACAP1Q9BZK3 213 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
CDH23-213ENST00000619887 WDR17Q8IZU2 1322 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 STK38Q15208 465 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
CDH23-213ENST00000619887 GNL3LQ9NVN8 582 aaKnown RBP11.68□□□□□ -0.54
CDH23-213ENST00000619887 SLAIN2Q9P270 581 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 CPA1P15085 419 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 PTH1RQ03431 593 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
CDH23-213ENST00000619887 RNF113AO15541 343 aaKnown RBP11.67□□□□□ -0.54
CDH23-213ENST00000619887 BRF1Q92994 677 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 XRN1Q8IZH2 1706 aaKnown RBP11.67□□□□□ -0.54
CDH23-213ENST00000619887 ATP2B3Q16720 1220 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 CARD10Q9BWT7 1032 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 SALL3Q9BXA9 1300 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 IDH1O75874 414 aaKnown RBP11.67□□□□□ -0.54
CDH23-213ENST00000619887 Q6ZUG5 572 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 STK11IPQ8N1F8 1099 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 TCEANC2Q96MN5 208 aa11.67□□□□□ -0.54
CDH23-213ENST00000619887 HOOK1Q9UJC3 728 aaKnown RBP11.67□□□□□ -0.54
CDH23-213ENST00000619887 ZNF213O14771 459 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 SASH1O94885 1247 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 A1BGP04217 495 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 UQCRFS1P1P0C7P4 283 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 GPTP24298 496 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 IGHMBP2P38935 993 aaKnown RBP11.66□□□□□ -0.54
CDH23-213ENST00000619887 ME1P48163 572 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 DNM1Q05193 864 aaKnown RBP11.66□□□□□ -0.54
CDH23-213ENST00000619887 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 GPR108Q9NPR9 543 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
CDH23-213ENST00000619887 PES1O00541 588 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms