RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 GRAPQ13588 217 aa28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 GRAPLQ8TC17 118 aaPredicted RBP28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 JDP2Q8WYK2 163 aa28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 HACL1Q9UJ83 578 aa28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 MAP3K2Q9Y2U5 619 aa28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 COL4A5P29400 1685 aa28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 EAPPQ56P03 285 aaPredicted RBP28.37■■■□□ 2.13
SYNGR3-206ENST00000618464 LARGE2Q8N3Y3 721 aa28.37■■■□□ 2.13
SYNGR3-206ENST00000618464 METTL22Q9BUU2 404 aaPredicted RBP28.37■■■□□ 2.13
SYNGR3-206ENST00000618464 CREBZFQ9NS37 354 aa28.37■■■□□ 2.13
SYNGR3-206ENST00000618464 EPHX2P34913 555 aa28.35■■■□□ 2.13
SYNGR3-206ENST00000618464 SP8Q8IXZ3 490 aa28.35■■■□□ 2.13
SYNGR3-206ENST00000618464 ZBTB38Q8NAP3 1195 aaPredicted RBP28.35■■■□□ 2.13
SYNGR3-206ENST00000618464 JARID2Q92833 1246 aaPredicted RBP28.35■■■□□ 2.13
SYNGR3-206ENST00000618464 PASKQ96RG2 1323 aa28.35■■■□□ 2.13
SYNGR3-206ENST00000618464 PI4KAP2A4QPH2 592 aa28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 SLC4A2P04920 1241 aa28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 HSPA1AP0DMV8 641 aaKnown RBP28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 HSPA1BP0DMV9 641 aaKnown RBP28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 SF3B3Q15393 1217 aaKnown RBP28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 AOC3Q16853 763 aa28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 G2E3Q7L622 706 aa28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 GPC2Q8N158 579 aa28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 PI4KAP1Q8N8J0 262 aa28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 CCDC191Q8NCU4 936 aa28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 CWC25Q9NXE8 425 aaPredicted RBP28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 MKRN1Q9UHC7 482 aaKnown RBP28.34■■■□□ 2.13
SYNGR3-206ENST00000618464 PPIP5K2O43314 1243 aa28.33■■■□□ 2.13
SYNGR3-206ENST00000618464 ITGBL1O95965 494 aaPredicted RBP28.33■■■□□ 2.13
SYNGR3-206ENST00000618464 EXOSC9Q06265 439 aaKnown RBP28.33■■■□□ 2.13
SYNGR3-206ENST00000618464 DPP8Q6V1X1 898 aaPredicted RBP28.33■■■□□ 2.13
SYNGR3-206ENST00000618464 KSR2Q6VAB6 950 aa28.33■■■□□ 2.13
SYNGR3-206ENST00000618464 SPINK5Q9NQ38 1064 aaPredicted RBP28.33■■■□□ 2.13
SYNGR3-206ENST00000618464 CLEC11AQ9Y240 323 aa28.33■■■□□ 2.13
SYNGR3-206ENST00000618464 EIF6P56537 245 aaKnown RBP28.32■■■□□ 2.12
SYNGR3-206ENST00000618464 MPNDQ8N594 471 aa28.32■■■□□ 2.12
SYNGR3-206ENST00000618464 CELF1Q92879 486 aaKnown RBP28.32■■■□□ 2.12
SYNGR3-206ENST00000618464 NIM1KQ8IY84 436 aa28.31■■■□□ 2.12
SYNGR3-206ENST00000618464 GJA3Q9Y6H8 435 aa28.31■■■□□ 2.12
SYNGR3-206ENST00000618464 COL4A1P02462 1669 aa28.31■■■□□ 2.12
SYNGR3-206ENST00000618464 ADAMTSL1Q8N6G6 1762 aa28.31■■■□□ 2.12
SYNGR3-206ENST00000618464 PCCAP05165 728 aaPredicted RBP28.3■■■□□ 2.12
SYNGR3-206ENST00000618464 SUPT20HQ8NEM7 779 aa28.3■■■□□ 2.12
SYNGR3-206ENST00000618464 IGKV5-2P06315 115 aa28.29■■■□□ 2.12
SYNGR3-206ENST00000618464 PNMA8AQ86V59 439 aaPredicted RBP28.29■■■□□ 2.12
SYNGR3-206ENST00000618464 RTFDC1Q9BY42 306 aaPredicted RBP28.29■■■□□ 2.12
SYNGR3-206ENST00000618464 VAMP4O75379 141 aa28.28■■■□□ 2.12
SYNGR3-206ENST00000618464 NEXNQ0ZGT2 675 aa28.28■■■□□ 2.12
SYNGR3-206ENST00000618464 TMC4Q7Z404 712 aa28.28■■■□□ 2.12
SYNGR3-206ENST00000618464 HSP90B1P14625 803 aaKnown RBP28.27■■■□□ 2.12
SYNGR3-206ENST00000618464 FLIIQ13045 1269 aa28.27■■■□□ 2.12
SYNGR3-206ENST00000618464 MAP1SQ66K74 1059 aaPredicted RBP28.27■■■□□ 2.12
SYNGR3-206ENST00000618464 CCDC85AQ96PX6 553 aaPredicted RBP28.27■■■□□ 2.12
SYNGR3-206ENST00000618464 MYH16Q9H6N6 1097 aa28.27■■■□□ 2.12
SYNGR3-206ENST00000618464 LRRC37AA6NMS7 1700 aa28.26■■■□□ 2.12
SYNGR3-206ENST00000618464 CWF19L2Q2TBE0 894 aaKnown RBP28.26■■■□□ 2.11
SYNGR3-206ENST00000618464 SEC31BQ9NQW1 1179 aa28.26■■■□□ 2.11
SYNGR3-206ENST00000618464 LTBP1Q14766 1721 aa28.26■■■□□ 2.11
SYNGR3-206ENST00000618464 CNTNAP1P78357 1384 aa28.25■■■□□ 2.11
SYNGR3-206ENST00000618464 TMEM88BA6NKF7 163 aa28.25■■■□□ 2.11
SYNGR3-206ENST00000618464 PDE8AO60658 829 aa28.25■■■□□ 2.11
SYNGR3-206ENST00000618464 FKBP5Q13451 457 aaPredicted RBP28.25■■■□□ 2.11
SYNGR3-206ENST00000618464 CNTROBQ8N137 903 aa28.25■■■□□ 2.11
SYNGR3-206ENST00000618464 VPS33BQ9H267 617 aa28.25■■■□□ 2.11
SYNGR3-206ENST00000618464 SCNN1DP51172 638 aa28.24■■■□□ 2.11
SYNGR3-206ENST00000618464 NSFL1CQ9UNZ2 370 aaKnown RBP28.24■■■□□ 2.11
SYNGR3-206ENST00000618464 DUOX1Q9NRD9 1551 aa28.24■■■□□ 2.11
SYNGR3-206ENST00000618464 NEURL1BA8MQ27 555 aa28.23■■■□□ 2.11
SYNGR3-206ENST00000618464 EPS15P42566 896 aa28.23■■■□□ 2.11
SYNGR3-206ENST00000618464 RPS8P62241 208 aaKnown RBP28.23■■■□□ 2.11
SYNGR3-206ENST00000618464 CCDC152Q4G0S7 254 aa28.23■■■□□ 2.11
SYNGR3-206ENST00000618464 GPSM2P81274 684 aa28.22■■■□□ 2.11
SYNGR3-206ENST00000618464 KIAA2012Q0VF49 1180 aa28.22■■■□□ 2.11
SYNGR3-206ENST00000618464 CDHR2Q9BYE9 1310 aa28.21■■■□□ 2.11
SYNGR3-206ENST00000618464 LMOD1P29536 600 aaPredicted RBP28.21■■■□□ 2.11
SYNGR3-206ENST00000618464 TNS4Q8IZW8 715 aa28.21■■■□□ 2.11
SYNGR3-206ENST00000618464 ZNRF3Q9ULT6 936 aa28.21■■■□□ 2.11
SYNGR3-206ENST00000618464 C6orf229H3BNL8 230 aa28.19■■■□□ 2.1
SYNGR3-206ENST00000618464 VEGFBP49765 207 aa28.19■■■□□ 2.1
SYNGR3-206ENST00000618464 CTSWP56202 376 aa28.19■■■□□ 2.1
SYNGR3-206ENST00000618464 CXCL9Q07325 125 aa28.19■■■□□ 2.1
SYNGR3-206ENST00000618464 DNAAF4Q8WXU2 420 aa28.19■■■□□ 2.1
SYNGR3-206ENST00000618464 ZNF521Q96K83 1311 aa28.18■■■□□ 2.1
SYNGR3-206ENST00000618464 UBE3BQ7Z3V4 1068 aa28.18■■■□□ 2.1
SYNGR3-206ENST00000618464 POLLQ9UGP5 575 aa28.18■■■□□ 2.1
SYNGR3-206ENST00000618464 CACNA1FO60840 1977 aa28.18■■■□□ 2.1
SYNGR3-206ENST00000618464 RIMBP2O15034 1052 aa28.17■■■□□ 2.1
SYNGR3-206ENST00000618464 RAD17O75943 681 aa28.17■■■□□ 2.1
SYNGR3-206ENST00000618464 GPR101Q96P66 508 aaPredicted RBP28.17■■■□□ 2.1
SYNGR3-206ENST00000618464 FMR1Q06787 632 aaKnown RBP eCLIP28.16■■■□□ 2.1
SYNGR3-206ENST00000618464 GCKRQ14397 625 aa28.16■■■□□ 2.1
SYNGR3-206ENST00000618464 WASHC4Q2M389 1173 aa28.16■■■□□ 2.1
SYNGR3-206ENST00000618464 F6X3S4 739 aa28.15■■■□□ 2.1
SYNGR3-206ENST00000618464 CIAPIN1Q6FI81 312 aa28.15■■■□□ 2.1
SYNGR3-206ENST00000618464 USP50Q70EL3 339 aaPredicted RBP28.15■■■□□ 2.1
SYNGR3-206ENST00000618464 ANKRD18AQ8IVF6 992 aa28.15■■■□□ 2.1
SYNGR3-206ENST00000618464 YDJCA8MPS7 323 aa28.14■■■□□ 2.1
SYNGR3-206ENST00000618464 H7C1W4 665 aa28.14■■■□□ 2.1
SYNGR3-206ENST00000618464 LINS1Q8NG48 757 aa28.14■■■□□ 2.1
SYNGR3-206ENST00000618464 TTLL11Q8NHH1 800 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms