RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 LMBR1LQ6UX01 489 aa19.77■□□□□ 0.76
MALAT1-213ENST00000618227 RPAP2Q8IXW5 612 aaPredicted RBP19.77■□□□□ 0.76
MALAT1-213ENST00000618227 CCDC24Q8N4L8 307 aa19.77■□□□□ 0.76
MALAT1-213ENST00000618227 ANKRD44Q8N8A2 993 aa19.77■□□□□ 0.76
MALAT1-213ENST00000618227 MASTLQ96GX5 879 aa19.77■□□□□ 0.76
MALAT1-213ENST00000618227 CRAMP1Q96RY5 1269 aa19.77■□□□□ 0.76
MALAT1-213ENST00000618227 PPP1R1BQ9UD71 204 aaPredicted RBP19.77■□□□□ 0.76
MALAT1-213ENST00000618227 ALDH1B1P30837 517 aa19.76■□□□□ 0.75
MALAT1-213ENST00000618227 EPHA10Q5JZY3 1008 aa19.76■□□□□ 0.75
MALAT1-213ENST00000618227 C3orf67Q6ZVT6 689 aa19.76■□□□□ 0.75
MALAT1-213ENST00000618227 C2CD5Q86YS7 1000 aa19.76■□□□□ 0.75
MALAT1-213ENST00000618227 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
MALAT1-213ENST00000618227 RBM17Q96I25 401 aaKnown RBP19.76■□□□□ 0.75
MALAT1-213ENST00000618227 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
MALAT1-213ENST00000618227 DDX60Q8IY21 1712 aaKnown RBP19.75■□□□□ 0.75
MALAT1-213ENST00000618227 NEFLP07196 543 aa19.74■□□□□ 0.75
MALAT1-213ENST00000618227 ATP8B2P98198 1209 aa19.74■□□□□ 0.75
MALAT1-213ENST00000618227 ERICH6BQ5W0A0 696 aa19.74■□□□□ 0.75
MALAT1-213ENST00000618227 CNKSR1Q969H4 720 aa19.74■□□□□ 0.75
MALAT1-213ENST00000618227 ANKRD31Q8N7Z5 1873 aa19.73■□□□□ 0.75
MALAT1-213ENST00000618227 BBOX1O75936 387 aa19.73■□□□□ 0.75
MALAT1-213ENST00000618227 KCNA3P22001 575 aa19.73■□□□□ 0.75
MALAT1-213ENST00000618227 IFIT5Q13325 482 aaKnown RBP19.73■□□□□ 0.75
MALAT1-213ENST00000618227 CCDC57Q2TAC2 916 aa19.73■□□□□ 0.75
MALAT1-213ENST00000618227 TMC4Q7Z404 712 aa19.73■□□□□ 0.75
MALAT1-213ENST00000618227 CDC5LQ99459 802 aaKnown RBP19.73■□□□□ 0.75
MALAT1-213ENST00000618227 FHDC1Q9C0D6 1143 aaPredicted RBP19.73■□□□□ 0.75
MALAT1-213ENST00000618227 GREM2Q9H772 168 aa19.73■□□□□ 0.75
MALAT1-213ENST00000618227 ANKRD18BA2A2Z9 1011 aa19.72■□□□□ 0.75
MALAT1-213ENST00000618227 DPEP1P16444 411 aa19.72■□□□□ 0.75
MALAT1-213ENST00000618227 CEP85Q6P2H3 762 aa19.72■□□□□ 0.75
MALAT1-213ENST00000618227 EXOC6Q8TAG9 804 aa19.72■□□□□ 0.75
MALAT1-213ENST00000618227 FBXO3Q9UK99 471 aa19.72■□□□□ 0.75
MALAT1-213ENST00000618227 ITGA6P23229 1130 aa19.71■□□□□ 0.75
MALAT1-213ENST00000618227 GRAPQ13588 217 aa19.71■□□□□ 0.75
MALAT1-213ENST00000618227 POLA2Q14181 598 aa19.71■□□□□ 0.75
MALAT1-213ENST00000618227 GRAPLQ8TC17 118 aaPredicted RBP19.71■□□□□ 0.75
MALAT1-213ENST00000618227 SSH3Q8TE77 659 aa19.71■□□□□ 0.75
MALAT1-213ENST00000618227 SYT17Q9BSW7 474 aa19.71■□□□□ 0.75
MALAT1-213ENST00000618227 PIM2Q9P1W9 311 aa19.71■□□□□ 0.75
MALAT1-213ENST00000618227 TNRC6CQ9HCJ0 1690 aaKnown RBP19.71■□□□□ 0.75
MALAT1-213ENST00000618227 A0A0G2JLW4 131 aa19.7■□□□□ 0.74
MALAT1-213ENST00000618227 HMMRO75330 724 aa19.7■□□□□ 0.74
MALAT1-213ENST00000618227 CHRNA5P30532 468 aa19.7■□□□□ 0.74
MALAT1-213ENST00000618227 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
MALAT1-213ENST00000618227 FAM161AQ3B820 660 aa19.7■□□□□ 0.74
MALAT1-213ENST00000618227 MYH3P11055 1940 aa19.69■□□□□ 0.74
MALAT1-213ENST00000618227 SRGAP3O43295 1099 aa19.69■□□□□ 0.74
MALAT1-213ENST00000618227 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
MALAT1-213ENST00000618227 TTLL6Q8N841 843 aa19.69■□□□□ 0.74
MALAT1-213ENST00000618227 COPRSQ9NQ92 184 aa19.69■□□□□ 0.74
MALAT1-213ENST00000618227 GRIPAP1Q4V328 841 aa19.68■□□□□ 0.74
MALAT1-213ENST00000618227 ANKRD18AQ8IVF6 992 aa19.68■□□□□ 0.74
MALAT1-213ENST00000618227 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
MALAT1-213ENST00000618227 C1orf115Q9H7X2 142 aa19.68■□□□□ 0.74
MALAT1-213ENST00000618227 BSDC1Q9NW68 430 aaPredicted RBP19.68■□□□□ 0.74
MALAT1-213ENST00000618227 CHMP3Q9Y3E7 222 aa19.68■□□□□ 0.74
MALAT1-213ENST00000618227 IGHMBP2P38935 993 aaKnown RBP19.67■□□□□ 0.74
MALAT1-213ENST00000618227 CC2D2BQ6DHV5 1058 aa19.67■□□□□ 0.74
MALAT1-213ENST00000618227 SEC31BQ9NQW1 1179 aa19.67■□□□□ 0.74
MALAT1-213ENST00000618227 KIAA1551Q9HCM1 1747 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 PNMA6EA0A0J9YXQ4 647 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 CIAO1O76071 339 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 IRX6P78412 446 aaPredicted RBP19.66■□□□□ 0.74
MALAT1-213ENST00000618227 PTPN12Q05209 780 aaKnown RBP19.66■□□□□ 0.74
MALAT1-213ENST00000618227 TAF7LQ5H9L4 462 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 SIRT2Q8IXJ6 389 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 SP8Q8IXZ3 490 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 KLHL34Q8N239 644 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 CELF1Q92879 486 aaKnown RBP19.66■□□□□ 0.74
MALAT1-213ENST00000618227 CCDC85AQ96PX6 553 aaPredicted RBP19.66■□□□□ 0.74
MALAT1-213ENST00000618227 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
MALAT1-213ENST00000618227 DLEC1Q9Y238 1755 aa19.65■□□□□ 0.74
MALAT1-213ENST00000618227 HDAC1Q13547 482 aaPredicted RBP19.65■□□□□ 0.74
MALAT1-213ENST00000618227 DALRD3Q5D0E6 543 aaKnown RBP19.65■□□□□ 0.74
MALAT1-213ENST00000618227 SOGA3Q5TF21 947 aa19.65■□□□□ 0.74
MALAT1-213ENST00000618227 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
MALAT1-213ENST00000618227 NLGN2Q8NFZ4 835 aa19.65■□□□□ 0.74
MALAT1-213ENST00000618227 C7orf43Q8WVR3 580 aa19.65■□□□□ 0.74
MALAT1-213ENST00000618227 MPHOSPH8Q99549 860 aa19.65■□□□□ 0.74
MALAT1-213ENST00000618227 NOP58Q9Y2X3 529 aaKnown RBP19.65■□□□□ 0.74
MALAT1-213ENST00000618227 ATP6V0A2Q9Y487 856 aa19.65■□□□□ 0.74
MALAT1-213ENST00000618227 LDHAL6AQ6ZMR3 332 aa19.64■□□□□ 0.73
MALAT1-213ENST00000618227 COL11A2P13942 1736 aaPredicted RBP19.64■□□□□ 0.73
MALAT1-213ENST00000618227 PPEF1O14829 653 aaPredicted RBP19.63■□□□□ 0.73
MALAT1-213ENST00000618227 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
MALAT1-213ENST00000618227 TMX4Q9H1E5 349 aaPredicted RBP19.63■□□□□ 0.73
MALAT1-213ENST00000618227 EYA2O00167 538 aa19.62■□□□□ 0.73
MALAT1-213ENST00000618227 RWDD1Q9H446 243 aaPredicted RBP19.62■□□□□ 0.73
MALAT1-213ENST00000618227 RIPOR2Q9Y4F9 1068 aa19.62■□□□□ 0.73
MALAT1-213ENST00000618227 IL15P40933 162 aaPredicted RBP19.61■□□□□ 0.73
MALAT1-213ENST00000618227 ANKRD2Q9GZV1 360 aa19.61■□□□□ 0.73
MALAT1-213ENST00000618227 MROH5Q6ZUA9 1318 aa19.6■□□□□ 0.73
MALAT1-213ENST00000618227 G3BP1Q13283 466 aaKnown RBP eCLIP19.6■□□□□ 0.73
MALAT1-213ENST00000618227 ZNF594Q96JF6 807 aaPredicted RBP19.6■□□□□ 0.73
MALAT1-213ENST00000618227 DCTPP1Q9H773 170 aa19.6■□□□□ 0.73
MALAT1-213ENST00000618227 CNNM1Q9NRU3 951 aa19.6■□□□□ 0.73
MALAT1-213ENST00000618227 PODXL2Q9NZ53 605 aa19.6■□□□□ 0.73
MALAT1-213ENST00000618227 MINPP1Q9UNW1 487 aa19.6■□□□□ 0.73
MALAT1-213ENST00000618227 RAB11FIP3O75154 756 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms