RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 UQCRFS1P1P0C7P4 283 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 MAATS1Q7Z4T9 603 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 RRP9O43818 475 aaKnown RBP12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 SLU7O95391 586 aaKnown RBP12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 SLC26A6Q9BXS9 759 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 HSF2BPO75031 334 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 ZWINTO95229 277 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 CCDC102BQ68D86 513 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 OTUD6BQ8N6M0 293 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 ODF2LQ9ULJ1 636 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 WTAPQ15007 396 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 TMC6Q7Z403 805 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 MSH6P52701 1360 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 CPLX3Q8WVH0 158 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 CCDC14Q49A88 953 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
CCDC144B-208ENST00000618081 GNAQP50148 359 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 STMN4Q9H169 189 aaPredicted RBP12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 APBB1IPQ7Z5R6 666 aaPredicted RBP12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 MSANTD4Q8NCY6 345 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 ZNF804AQ7Z570 1209 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 NYXQ9GZU5 481 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 PLS1Q14651 629 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 MMRN2Q9H8L6 949 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 GJB2P29033 226 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 FLIIQ13045 1269 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
CCDC144B-208ENST00000618081 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 C6orf50Q9HD87 102 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 FOXO3O43524 673 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 ESR2Q92731 530 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 UBE2HP62256 183 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 SLC4A8Q2Y0W8 1093 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 V9GYY5 206 aaPredicted RBP12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 GAS8O95995 478 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 SNW1Q13573 536 aaKnown RBP12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
CCDC144B-208ENST00000618081 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 ANKS4BQ8N8V4 417 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 WASLO00401 505 aaPredicted RBP12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 RBM25P49756 843 aaKnown RBP12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 SYKP43405 635 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 SNX16P57768 344 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 C16orf45Q96MC5 204 aaPredicted RBP12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 THUMPD2Q9BTF0 503 aaKnown RBP12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 CALCOCO1Q9P1Z2 691 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 BMS1Q14692 1282 aaKnown RBP12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 AMOTL2Q9Y2J4 779 aa12.72□□□□□ -0.37
CCDC144B-208ENST00000618081 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 NDC80O14777 642 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 HEATR3Q7Z4Q2 680 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 TAF12Q16514 161 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 CCDC117Q8IWD4 279 aaPredicted RBP12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 BIN1O00499 593 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 SPAG5Q96R06 1193 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 TRMT1Q9NXH9 659 aaKnown RBP12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 N4BP3O15049 544 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 GSTA5Q7RTV2 222 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
CCDC144B-208ENST00000618081 PLCG2P16885 1265 aa12.71□□□□□ -0.38
CCDC144B-208ENST00000618081 RTN1Q16799 776 aa12.71□□□□□ -0.38
CCDC144B-208ENST00000618081 KIAA1524Q8TCG1 905 aa12.71□□□□□ -0.38
CCDC144B-208ENST00000618081 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.38
CCDC144B-208ENST00000618081 F6X3S4 739 aa12.71□□□□□ -0.38
CCDC144B-208ENST00000618081 ZBTB43O43298 467 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 PAXBP1Q9Y5B6 917 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 TTC16Q8NEE8 873 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 TXNDC16Q9P2K2 825 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 LMBR1Q8WVP7 490 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 ABCC5O15440 1437 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms