RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 POLRMTO00411 1230 aaKnown RBP10.05□□□□□ -0.8
TARDBP-219ENST00000617757 SERPINB2P05120 415 aa10.05□□□□□ -0.8
TARDBP-219ENST00000617757 HCLS1P14317 486 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-219ENST00000617757 GTF2E1P29083 439 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-219ENST00000617757 DDR1Q08345 913 aa10.05□□□□□ -0.8
TARDBP-219ENST00000617757 SMC5Q8IY18 1101 aa10.05□□□□□ -0.8
TARDBP-219ENST00000617757 GCC1Q96CN9 775 aa10.05□□□□□ -0.8
TARDBP-219ENST00000617757 DCTPP1Q9H773 170 aa10.05□□□□□ -0.8
TARDBP-219ENST00000617757 CACNA1SQ13698 1873 aa10.04□□□□□ -0.8
TARDBP-219ENST00000617757 ABCC12Q96J65 1359 aa10.04□□□□□ -0.8
TARDBP-219ENST00000617757 HSP90B1P14625 803 aaKnown RBP10.04□□□□□ -0.8
TARDBP-219ENST00000617757 RFX5P48382 616 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-219ENST00000617757 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
TARDBP-219ENST00000617757 TTLL11Q8NHH1 800 aa10.04□□□□□ -0.8
TARDBP-219ENST00000617757 SLC16A10Q8TF71 515 aa10.04□□□□□ -0.8
TARDBP-219ENST00000617757 RIC1Q4ADV7 1423 aa10.04□□□□□ -0.8
TARDBP-219ENST00000617757 KIF13BQ9NQT8 1826 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 COL11A2P13942 1736 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-219ENST00000617757 CTSWP56202 376 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 MSL1Q68DK7 614 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 CCDC24Q8N4L8 307 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 CNBD1Q8NA66 436 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 CHMP3Q9Y3E7 222 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 PARP3Q9Y6F1 533 aa10.03□□□□□ -0.8
TARDBP-219ENST00000617757 COL4A1P02462 1669 aa10.02□□□□□ -0.8
TARDBP-219ENST00000617757 RTL9Q8NET4 1388 aa10.02□□□□□ -0.8
TARDBP-219ENST00000617757 SURF6O75683 361 aaKnown RBP10.02□□□□□ -0.81
TARDBP-219ENST00000617757 MMP10P09238 476 aa10.02□□□□□ -0.81
TARDBP-219ENST00000617757 PTPN12Q05209 780 aaKnown RBP10.02□□□□□ -0.81
TARDBP-219ENST00000617757 R3HDM1Q15032 1099 aaKnown RBP10.02□□□□□ -0.81
TARDBP-219ENST00000617757 SF3B3Q15393 1217 aaKnown RBP10.02□□□□□ -0.81
TARDBP-219ENST00000617757 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
TARDBP-219ENST00000617757 C3orf67Q6ZVT6 689 aa10.02□□□□□ -0.81
TARDBP-219ENST00000617757 KLHDC4Q8TBB5 520 aa10.02□□□□□ -0.81
TARDBP-219ENST00000617757 NLRP3Q96P20 1036 aa10.02□□□□□ -0.81
TARDBP-219ENST00000617757 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-219ENST00000617757 GREM2Q9H772 168 aa10.02□□□□□ -0.81
TARDBP-219ENST00000617757 PA2G4Q9UQ80 394 aaKnown RBP10.02□□□□□ -0.81
TARDBP-219ENST00000617757 EXOC6BQ9Y2D4 811 aa10.02□□□□□ -0.81
TARDBP-219ENST00000617757 NOP58Q9Y2X3 529 aaKnown RBP10.02□□□□□ -0.81
TARDBP-219ENST00000617757 DLEC1Q9Y238 1755 aa10.01□□□□□ -0.81
TARDBP-219ENST00000617757 LRP5O75197 1615 aa10.01□□□□□ -0.81
TARDBP-219ENST00000617757 NPHP1O15259 732 aa10.01□□□□□ -0.81
TARDBP-219ENST00000617757 ST5P78524 1137 aa10.01□□□□□ -0.81
TARDBP-219ENST00000617757 IFIT5Q13325 482 aaKnown RBP10.01□□□□□ -0.81
TARDBP-219ENST00000617757 CCDC57Q2TAC2 916 aa10.01□□□□□ -0.81
TARDBP-219ENST00000617757 CCDC152Q4G0S7 254 aa10.01□□□□□ -0.81
TARDBP-219ENST00000617757 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
TARDBP-219ENST00000617757 PDZRN3Q9UPQ7 1066 aa10.01□□□□□ -0.81
TARDBP-219ENST00000617757 ANKRD18BA2A2Z9 1011 aa10□□□□□ -0.81
TARDBP-219ENST00000617757 RAB11FIP3O75154 756 aa10□□□□□ -0.81
TARDBP-219ENST00000617757 ITGA6P23229 1130 aa10□□□□□ -0.81
TARDBP-219ENST00000617757 NUCB1Q02818 461 aa10□□□□□ -0.81
TARDBP-219ENST00000617757 G3BP1Q13283 466 aaKnown RBP eCLIP10□□□□□ -0.81
TARDBP-219ENST00000617757 HSP90AB4PQ58FF6 505 aa10□□□□□ -0.81
TARDBP-219ENST00000617757 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
TARDBP-219ENST00000617757 SEC31BQ9NQW1 1179 aa10□□□□□ -0.81
TARDBP-219ENST00000617757 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
TARDBP-219ENST00000617757 KLRG2A4D1S0 409 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-219ENST00000617757 PSDA5PKW4 1024 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-219ENST00000617757 ZBTB7AO95365 584 aa9.99□□□□□ -0.81
TARDBP-219ENST00000617757 CHD1LQ86WJ1 897 aa9.99□□□□□ -0.81
TARDBP-219ENST00000617757 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
TARDBP-219ENST00000617757 MTFR1LQ9H019 292 aa9.99□□□□□ -0.81
TARDBP-219ENST00000617757 SIL1Q9H173 461 aa9.99□□□□□ -0.81
TARDBP-219ENST00000617757 ARAP2Q8WZ64 1704 aa9.99□□□□□ -0.81
TARDBP-219ENST00000617757 EYA2O00167 538 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 APBB1O00213 710 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-219ENST00000617757 SASH1O94885 1247 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 OS9Q13438 667 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-219ENST00000617757 CRY2Q49AN0 593 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 LRRC24Q50LG9 513 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 TAF7LQ5H9L4 462 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 ATG9AQ7Z3C6 839 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 ERC1Q8IUD2 1116 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 KIF1BPQ96EK5 621 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 BRIP1Q9BX63 1249 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 PUS3Q9BZE2 481 aaKnown RBP9.98□□□□□ -0.81
TARDBP-219ENST00000617757 LRRCC1Q9C099 1032 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 FBXO3Q9UK99 471 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 LRRC37AA6NMS7 1700 aa9.98□□□□□ -0.81
TARDBP-219ENST00000617757 CIAO1O76071 339 aa9.97□□□□□ -0.81
TARDBP-219ENST00000617757 PDE4AP27815 886 aa9.97□□□□□ -0.81
TARDBP-219ENST00000617757 IL15P40933 162 aaPredicted RBP9.97□□□□□ -0.81
TARDBP-219ENST00000617757 LDHAL6AQ6ZMR3 332 aa9.97□□□□□ -0.81
TARDBP-219ENST00000617757 DDX46Q7L014 1031 aaKnown RBP9.97□□□□□ -0.81
TARDBP-219ENST00000617757 CDC5LQ99459 802 aaKnown RBP9.97□□□□□ -0.81
TARDBP-219ENST00000617757 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
TARDBP-219ENST00000617757 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
TARDBP-219ENST00000617757 RIPOR2Q9Y4F9 1068 aa9.97□□□□□ -0.81
TARDBP-219ENST00000617757 AK9Q5TCS8 1911 aa9.97□□□□□ -0.81
TARDBP-219ENST00000617757 BRCA1P38398 1863 aaKnown RBP9.96□□□□□ -0.81
TARDBP-219ENST00000617757 HOXA10P31260 410 aaPredicted RBP9.96□□□□□ -0.82
TARDBP-219ENST00000617757 PDE6BP35913 854 aa9.96□□□□□ -0.82
TARDBP-219ENST00000617757 IGHMBP2P38935 993 aaKnown RBP9.96□□□□□ -0.82
TARDBP-219ENST00000617757 RPGRQ92834 1020 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms