RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CIZ1Q9ULV3 898 aaPredicted RBP20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 UBN2Q6ZU65 1347 aa20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 TIMM10P62072 90 aa20.98■□□□□ 0.95
PCDHGC3-205ENST00000617641 TRMT112Q9UI30 125 aaKnown RBP20.98■□□□□ 0.95
PCDHGC3-205ENST00000617641 HIP1O00291 1037 aa20.98■□□□□ 0.95
PCDHGC3-205ENST00000617641 ZNF609O15014 1411 aa20.98■□□□□ 0.95
PCDHGC3-205ENST00000617641 PTH1RQ03431 593 aa20.98■□□□□ 0.95
PCDHGC3-205ENST00000617641 GPR108Q9NPR9 543 aa20.98■□□□□ 0.95
PCDHGC3-205ENST00000617641 USP21Q9UK80 565 aa20.98■□□□□ 0.95
PCDHGC3-205ENST00000617641 MYH14Q7Z406 1995 aaKnown RBP20.97■□□□□ 0.95
PCDHGC3-205ENST00000617641 RREB1Q92766 1687 aa20.97■□□□□ 0.95
PCDHGC3-205ENST00000617641 SMARCC1Q92922 1105 aaPredicted RBP20.97■□□□□ 0.95
PCDHGC3-205ENST00000617641 CICQ96RK0 1608 aaPredicted RBP20.97■□□□□ 0.95
PCDHGC3-205ENST00000617641 SPATA31A6Q5VVP1 1343 aa20.97■□□□□ 0.95
PCDHGC3-205ENST00000617641 ZNF34Q8IZ26 560 aa20.96■□□□□ 0.95
PCDHGC3-205ENST00000617641 DNAJC2Q99543 621 aaKnown RBP20.96■□□□□ 0.95
PCDHGC3-205ENST00000617641 UPF3BQ9BZI7 483 aaKnown RBP20.96■□□□□ 0.95
PCDHGC3-205ENST00000617641 A0A0D9SFI3 127 aa20.96■□□□□ 0.95
PCDHGC3-205ENST00000617641 IRS4O14654 1257 aaPredicted RBP20.96■□□□□ 0.95
PCDHGC3-205ENST00000617641 IFIT5Q13325 482 aaKnown RBP20.96■□□□□ 0.95
PCDHGC3-205ENST00000617641 SNX14Q9Y5W7 946 aa20.96■□□□□ 0.95
PCDHGC3-205ENST00000617641 DEKP35659 375 aaKnown RBP20.95■□□□□ 0.94
PCDHGC3-205ENST00000617641 TAF7LQ5H9L4 462 aa20.95■□□□□ 0.94
PCDHGC3-205ENST00000617641 TTLL11Q8NHH1 800 aa20.95■□□□□ 0.94
PCDHGC3-205ENST00000617641 HAUS7Q99871 368 aa20.95■□□□□ 0.94
PCDHGC3-205ENST00000617641 CTSWP56202 376 aa20.95■□□□□ 0.94
PCDHGC3-205ENST00000617641 RASEFQ8IZ41 740 aa20.95■□□□□ 0.94
PCDHGC3-205ENST00000617641 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.94
PCDHGC3-205ENST00000617641 GREM2Q9H772 168 aa20.94■□□□□ 0.94
PCDHGC3-205ENST00000617641 A0A1B0GUL7 405 aa20.94■□□□□ 0.94
PCDHGC3-205ENST00000617641 MYH3P11055 1940 aa20.94■□□□□ 0.94
PCDHGC3-205ENST00000617641 CCDC171Q6TFL3 1326 aa20.93■□□□□ 0.94
PCDHGC3-205ENST00000617641 CAMTA2O94983 1202 aa20.93■□□□□ 0.94
PCDHGC3-205ENST00000617641 PTF1AQ7RTS3 328 aa20.93■□□□□ 0.94
PCDHGC3-205ENST00000617641 ITGA6P23229 1130 aa20.93■□□□□ 0.94
PCDHGC3-205ENST00000617641 RAB3GAP1Q15042 981 aa20.93■□□□□ 0.94
PCDHGC3-205ENST00000617641 CERKQ8TCT0 537 aa20.93■□□□□ 0.94
PCDHGC3-205ENST00000617641 FBXO3Q9UK99 471 aa20.93■□□□□ 0.94
PCDHGC3-205ENST00000617641 COL5A3P25940 1745 aaPredicted RBP20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 MCM4P33991 863 aa20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 NOL8Q76FK4 1167 aaKnown RBP20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 DDX46Q7L014 1031 aaKnown RBP20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 SNRKQ9NRH2 765 aa20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 PDE8AO60658 829 aa20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 MCM2P49736 904 aa20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 KCNQ4P56696 695 aa20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 TNPO1Q92973 898 aaKnown RBP20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 TMX3Q96JJ7 454 aa20.92■□□□□ 0.94
PCDHGC3-205ENST00000617641 FAM177BA6PVY3 158 aa20.91■□□□□ 0.94
PCDHGC3-205ENST00000617641 SUSD4Q5VX71 490 aa20.91■□□□□ 0.94
PCDHGC3-205ENST00000617641 PRPF40BQ6NWY9 871 aaKnown RBP20.91■□□□□ 0.94
PCDHGC3-205ENST00000617641 ZGPATQ8N5A5 531 aaKnown RBP20.91■□□□□ 0.94
PCDHGC3-205ENST00000617641 MED23Q9ULK4 1368 aa20.91■□□□□ 0.94
PCDHGC3-205ENST00000617641 CHGBP05060 677 aa20.9■□□□□ 0.94
PCDHGC3-205ENST00000617641 ZNF589Q86UQ0 364 aaPredicted RBP20.9■□□□□ 0.94
PCDHGC3-205ENST00000617641 LINC00116Q8NCU8 138 aa20.9■□□□□ 0.94
PCDHGC3-205ENST00000617641 THSD7AQ9UPZ6 1657 aa20.9■□□□□ 0.94
PCDHGC3-205ENST00000617641 RBM8AQ9Y5S9 174 aaKnown RBP20.9■□□□□ 0.94
PCDHGC3-205ENST00000617641 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
PCDHGC3-205ENST00000617641 ANKRD18BA2A2Z9 1011 aa20.89■□□□□ 0.94
PCDHGC3-205ENST00000617641 FAM182BQ5T319 152 aa20.89■□□□□ 0.94
PCDHGC3-205ENST00000617641 MEX3CQ5U5Q3 659 aaKnown RBP20.89■□□□□ 0.94
PCDHGC3-205ENST00000617641 RFX7Q2KHR2 1363 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 GOLIM4O00461 696 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 ADORA1P30542 326 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 NECTIN1Q15223 517 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 LDHAL6AQ6ZMR3 332 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 MAP4K1Q92918 833 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 AKAP2Q9Y2D5 859 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 RIPOR2Q9Y4F9 1068 aa20.89■□□□□ 0.93
PCDHGC3-205ENST00000617641 HSPA1LP34931 641 aa20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 KBTBD3Q8NAB2 608 aa20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 PAG1Q9NWQ8 432 aa20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 ZNF831Q5JPB2 1677 aa20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 SSFA2P28290 1259 aa20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 KCNJ4P48050 445 aa20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 SH3TC1Q8TE82 1336 aa20.88■□□□□ 0.93
PCDHGC3-205ENST00000617641 IFIT1P09914 478 aaKnown RBP20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 METTL24Q5JXM2 366 aa20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 KCNB2Q92953 911 aa20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 XAGE2Q96GT9 111 aa20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 CREB3L3Q68CJ9 461 aa20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 CNNM1Q9NRU3 951 aa20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 NIP7Q9Y221 180 aaKnown RBP eCLIP20.87■□□□□ 0.93
PCDHGC3-205ENST00000617641 CPA1P15085 419 aa20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 ADCK5Q3MIX3 580 aa20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 GORABQ5T7V8 394 aa20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 TTC14Q96N46 770 aa20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 SEC62Q99442 399 aaKnown RBP20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 CWC22Q9HCG8 908 aaKnown RBP20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 CASTP20810 708 aaKnown RBP20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 PARP10Q53GL7 1025 aa20.86■□□□□ 0.93
PCDHGC3-205ENST00000617641 BTAF1O14981 1849 aa20.85■□□□□ 0.93
PCDHGC3-205ENST00000617641 TAF5LO75529 589 aa20.85■□□□□ 0.93
PCDHGC3-205ENST00000617641 CUL4AQ13619 759 aa20.85■□□□□ 0.93
PCDHGC3-205ENST00000617641 CCDC129Q6ZRS4 1044 aa20.85■□□□□ 0.93
PCDHGC3-205ENST00000617641 JAKMIP1Q96N16 626 aaKnown RBP20.85■□□□□ 0.93
PCDHGC3-205ENST00000617641 BCORQ6W2J9 1755 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms