RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 EN1Q05925 392 aaPredicted RBP14.51□□□□□ -0.09
PDPN-211ENST00000617617 EXOC6BQ9Y2D4 811 aa14.51□□□□□ -0.09
PDPN-211ENST00000617617 NFIXQ14938 502 aa14.51□□□□□ -0.09
PDPN-211ENST00000617617 TPTE2Q6XPS3 522 aa14.51□□□□□ -0.09
PDPN-211ENST00000617617 COL23A1Q86Y22 540 aaPredicted RBP14.51□□□□□ -0.09
PDPN-211ENST00000617617 NLGN1Q8N2Q7 840 aa14.51□□□□□ -0.09
PDPN-211ENST00000617617 JARID2Q92833 1246 aaPredicted RBP14.51□□□□□ -0.09
PDPN-211ENST00000617617 TFCP2L1Q9NZI6 479 aa14.51□□□□□ -0.09
PDPN-211ENST00000617617 PHF14O94880 888 aa14.5□□□□□ -0.09
PDPN-211ENST00000617617 LNPKQ9C0E8 428 aa14.5□□□□□ -0.09
PDPN-211ENST00000617617 STK32BQ9NY57 414 aa14.5□□□□□ -0.09
PDPN-211ENST00000617617 ABCC12Q96J65 1359 aa14.5□□□□□ -0.09
PDPN-211ENST00000617617 G3BP1Q13283 466 aaKnown RBP eCLIP14.5□□□□□ -0.09
PDPN-211ENST00000617617 PLEKHM2Q8IWE5 1019 aa14.5□□□□□ -0.09
PDPN-211ENST00000617617 SASH1O94885 1247 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
PDPN-211ENST00000617617 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 ATG9AQ7Z3C6 839 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
PDPN-211ENST00000617617 TAF1P21675 1872 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 EYA2O00167 538 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 IFIT5Q13325 482 aaKnown RBP14.49□□□□□ -0.09
PDPN-211ENST00000617617 ERFEQ4G0M1 354 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 SMIM5Q71RC9 77 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 SYNE4Q8N205 404 aa14.49□□□□□ -0.09
PDPN-211ENST00000617617 COL11A2P13942 1736 aaPredicted RBP14.48□□□□□ -0.09
PDPN-211ENST00000617617 ANKRD18BA2A2Z9 1011 aa14.48□□□□□ -0.09
PDPN-211ENST00000617617 KLRG2A4D1S0 409 aaPredicted RBP14.48□□□□□ -0.09
PDPN-211ENST00000617617 POLRMTO00411 1230 aaKnown RBP14.48□□□□□ -0.09
PDPN-211ENST00000617617 NBPF5PQ86XG9 351 aaPredicted RBP14.48□□□□□ -0.09
PDPN-211ENST00000617617 FAM161AQ3B820 660 aa14.48□□□□□ -0.09
PDPN-211ENST00000617617 BMP2KLQ5H9B9 411 aa14.48□□□□□ -0.09
PDPN-211ENST00000617617 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
PDPN-211ENST00000617617 PA2G4Q9UQ80 394 aaKnown RBP14.48□□□□□ -0.09
PDPN-211ENST00000617617 ZNF609O15014 1411 aa14.48□□□□□ -0.09
PDPN-211ENST00000617617 TTC41PQ6P2S7 1318 aa14.48□□□□□ -0.09
PDPN-211ENST00000617617 COL4A1P02462 1669 aa14.47□□□□□ -0.09
PDPN-211ENST00000617617 ITGA6P23229 1130 aa14.47□□□□□ -0.09
PDPN-211ENST00000617617 GREM2Q9H772 168 aa14.47□□□□□ -0.09
PDPN-211ENST00000617617 LTBP1Q14766 1721 aa14.47□□□□□ -0.09
PDPN-211ENST00000617617 CRY2Q49AN0 593 aa14.46□□□□□ -0.09
PDPN-211ENST00000617617 SLC16A10Q8TF71 515 aa14.46□□□□□ -0.09
PDPN-211ENST00000617617 RIPOR2Q9Y4F9 1068 aa14.46□□□□□ -0.09
PDPN-211ENST00000617617 ZBTB22O15209 634 aa14.46□□□□□ -0.1
PDPN-211ENST00000617617 DDR1Q08345 913 aa14.46□□□□□ -0.1
PDPN-211ENST00000617617 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.1
PDPN-211ENST00000617617 CLASRPQ8N2M8 674 aaKnown RBP14.46□□□□□ -0.1
PDPN-211ENST00000617617 SMARCA5O60264 1052 aaPredicted RBP14.45□□□□□ -0.1
PDPN-211ENST00000617617 HCLS1P14317 486 aaPredicted RBP14.45□□□□□ -0.1
PDPN-211ENST00000617617 PRR5LQ6MZQ0 368 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 NUTM1Q86Y26 1132 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 CNBD1Q8NA66 436 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 SERPINB2P05120 415 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 RGS3P49796 1198 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 PDE1AP54750 535 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 TTC22Q5TAA0 569 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 SKAP1Q86WV1 359 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 NLRP3Q96P20 1036 aa14.45□□□□□ -0.1
PDPN-211ENST00000617617 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 AKAP11Q9UKA4 1901 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 MX1P20591 662 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 VGLL2Q8N8G2 317 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 KIAA1551Q9HCM1 1747 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 ST5P78524 1137 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 OS9Q13438 667 aaPredicted RBP14.44□□□□□ -0.1
PDPN-211ENST00000617617 TICAM2Q86XR7 235 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 CDC5LQ99459 802 aaKnown RBP14.44□□□□□ -0.1
PDPN-211ENST00000617617 MYH7P12883 1935 aa14.44□□□□□ -0.1
PDPN-211ENST00000617617 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
PDPN-211ENST00000617617 BICDL1Q6ZP65 573 aa14.43□□□□□ -0.1
PDPN-211ENST00000617617 DEFB132Q7Z7B7 95 aa14.43□□□□□ -0.1
PDPN-211ENST00000617617 C16orf71Q8IYS4 520 aaPredicted RBP14.43□□□□□ -0.1
PDPN-211ENST00000617617 KLHDC4Q8TBB5 520 aa14.43□□□□□ -0.1
PDPN-211ENST00000617617 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
PDPN-211ENST00000617617 UPF1Q92900 1129 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDPN-211ENST00000617617 CHMP3Q9Y3E7 222 aa14.43□□□□□ -0.1
PDPN-211ENST00000617617 DOCK2Q92608 1830 aa14.43□□□□□ -0.1
PDPN-211ENST00000617617 HOXA10P31260 410 aaPredicted RBP14.42□□□□□ -0.1
PDPN-211ENST00000617617 AKAP2Q9Y2D5 859 aa14.42□□□□□ -0.1
PDPN-211ENST00000617617 MYH13Q9UKX3 1938 aa14.42□□□□□ -0.1
PDPN-211ENST00000617617 TFCP2Q12800 502 aa14.42□□□□□ -0.1
PDPN-211ENST00000617617 C3orf67Q6ZVT6 689 aa14.42□□□□□ -0.1
PDPN-211ENST00000617617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.42□□□□□ -0.1
PDPN-211ENST00000617617 LRRC24Q50LG9 513 aa14.42□□□□□ -0.1
PDPN-211ENST00000617617 PI4K2BQ8TCG2 481 aa14.42□□□□□ -0.1
PDPN-211ENST00000617617 OTUD7AQ8TE49 926 aaPredicted RBP14.42□□□□□ -0.1
PDPN-211ENST00000617617 EAF2Q96CJ1 260 aaPredicted RBP14.42□□□□□ -0.1
PDPN-211ENST00000617617 GPATCH3Q96I76 525 aa14.42□□□□□ -0.1
PDPN-211ENST00000617617 BSDC1Q9NW68 430 aaPredicted RBP14.42□□□□□ -0.1
PDPN-211ENST00000617617 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
PDPN-211ENST00000617617 ZNF594Q96JF6 807 aaPredicted RBP14.41□□□□□ -0.1
PDPN-211ENST00000617617 BRIP1Q9BX63 1249 aa14.41□□□□□ -0.1
PDPN-211ENST00000617617 BACH2Q9BYV9 841 aa14.41□□□□□ -0.1
PDPN-211ENST00000617617 SIL1Q9H173 461 aa14.41□□□□□ -0.1
PDPN-211ENST00000617617 GTF2E1P29083 439 aaPredicted RBP14.41□□□□□ -0.1
PDPN-211ENST00000617617 TAF7LQ5H9L4 462 aa14.41□□□□□ -0.1
PDPN-211ENST00000617617 IL1RAPL2Q9NP60 686 aa14.41□□□□□ -0.1
PDPN-211ENST00000617617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.41□□□□□ -0.1
PDPN-211ENST00000617617 BRCA1P38398 1863 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms